bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: TDRKH

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TDRKH 1 1.614 -0.560 0.080 1.534

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for TDRKH:





Protein-protein Interactions for TDRKH

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ARHGAP19 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TDRKH

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members KH_dom_type_2 IPR004044 0.34
Category members Tudor IPR002999 0.28
Category members KH_dom IPR004087 0.23
Category members KH_dom_type_1 IPR004088 0.13


Protein complexes (CORUM database) featuring TDRKH

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TDRKH

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0030154 cell differentiation Database 0.06
Category members GO Category GO:0007140 male meiosis Database 0
Category members GO Category GO:0007283 spermatogenesis Database 0
Category members GO Category GO:0009566 fertilization Database 0
Category members GO Category GO:0031047 gene silencing by RNA Database 0
Category members GO Category GO:0034587 piRNA metabolic process Database 0
Category members GO Category GO:0043046 DNA methylation involved in gamete generation Database 0


© Copyright Svejstrup Laboratory 2015