RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
IGF2BP1	2	0.480	-0.920	-0.339	0.012	0.258	-0.196	0.244
KHSRP	1	0.130	-0.080	-1.346	-0.756	-1.217	-1.712	-0.497
N4BP1	1	-1.890	2.620
N4BP1	1	-0.940	0.710
FUBP3	1	-0.110	0.590	-0.886	-1.285	-0.518	-0.444	-0.041
KRR1	1			-1.084			-0.394	0.016
PNO1	1	-1.220	1.860	1.948			-0.369	-0.020
KHDRBS1	1	-0.370	-0.090
KHDRBS1	1	-0.370	-0.090	-0.648	-1.258	-0.381	-0.646	-0.079
PNPT1	1	-1.420	2.630		1.469	-0.694	0.280	0.483
TDRKH	1	-0.560	0.080					1.534
MEX3A	1	0.410	0.070
IGF2BP2	0	0.940	-0.700	-0.420	-0.768	-0.151	-0.017	0.260
KHNYN	0	-0.550	0.790
KHDRBS2	0	0.670	-0.480
KHDRBS2	0	0.670	-0.480	-0.648	-1.258	-0.381	-0.646	-0.079
QKI	0	1.130	-0.950				-2.091	-0.975
QKI	0	1.130	-0.950	-1.223
FXR1	0	0.630	-0.330	0.529			0.083	0.357
HDLBP	0	-0.130	0.010		-0.328	-0.576	-1.371	-0.034
HDLBP	0	-0.130	0.010	0.802			-0.874	-0.314
AKAP1	0
AKAP1	0			-2.003			-0.132	-0.132
BICC1	0	-0.470	0.500
FMR1	0				-0.041	0.382	-0.062	0.362
FXR1	0	0.630	-0.330		-0.041	0.382	-0.062	0.362
FXR2	0	1.790	-0.760		-0.041	0.382	-0.062	0.362
ANKHD1	0	-0.920	1.200				-0.991	0.077
ANKHD1	0	-0.670	1.190				-0.991	0.077
ANKHD1	0	-0.920	1.200	-0.354			-0.387	-0.466
ANKHD1	0	-0.670	1.190	-0.354			-0.387	-0.466
KHDRBS3	0	0.380	-0.040	-0.519	-1.761	-1.163	-0.516	-0.192
NFKBIL1	0	1.270	-0.960	-0.519	-1.761	-1.163	-0.516	-0.192
ANKRD17	0	0.200	-0.560				-0.991	0.077
IGF2BP3	0	0.270	-0.640	-0.052	-0.850	-0.420	0.103	0.530
ASCC1	0	1.460	-0.840		-0.235	-0.305
FUBP1	0	-0.530	0.120	-1.002
FUBP1	0	-0.530	0.120		0.095	-2.029
FUBP1	0	-0.530	0.120				-1.116	-0.826
HNRNPK	0	-0.160	0.450	-0.273	-1.081	-0.609	-0.231	-0.195
HNRNPK	0	-0.160	0.450
SF1	0	-1.650	2.470	-0.710
SF1	0	-1.650	2.470				-0.461
SF1	0	-1.650	2.470	-0.405	-0.524	-0.618	-1.262	-0.522
PCBP1	0	-0.900	0.950	-0.634	-0.728	-0.566
PCBP3	0	-0.060	-0.510	-0.835	-0.602	-0.993	-0.725	-0.337
PCBP2	0	-0.130	-0.320
PCBP2	0	-0.130	-0.320
PCBP2	0	-0.130	-0.320	-0.835	-0.602	-0.993	-0.725	-0.337
NYNRIN	0

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AKAP1	Phosphorylation	S147	0.424	0.589	_S(ph)ESSGILPNTTDM(ox)R_
AKAP1	Phosphorylation	S149	0.307	0.682	_SES(ph)SGILPNTTDMR_
AKAP1	Phosphorylation	S192	0.935	1.193	_SIPLECPLS(ph)SPK_
AKAP1	Phosphorylation	S193	1.023	1.057	_SIPLECPLSS(ph)PK_
AKAP1	Phosphorylation	S487	0.615	0.512	_SLLSS(ph)PTK_
AKAP1	Ubiquitylation	K667		-0.208	_LIGK(gl)QGR_
AKAP1	Ubiquitylation	K842		0.367	_YVDYGGYK(gl)R_
AKAP1	Ubiquitylation	K845	-0.226	0.471	_VK(gl)VDVLR_
ANKHD1	Phosphorylation	T12		-1.213	_ATVPVAAAT(ph)AAEGEGSPPAVAAVAGPPAAAEVGGGVGGSSR_
ANKHD1	Ubiquitylation	K164	-0.295	0.666	_LSTADGK(gl)AFADPEVLR_
ANKHD1	Ubiquitylation	K607	0.441	0.643	_TPLMK(gl)AAR_
ANKHD1	Phosphorylation	T735		-1.561	_GGHTSVVCYLLDYPNNLLSAPPPDVTQLT(ph)PPSHDLNR_
ANKHD1	Ubiquitylation	K1302	0.662	0.807	_DTALTIAADK(gl)GHYK_
ANKHD1	Ubiquitylation	K1306	-0.019	-0.113	_DTALTIAADKGHYK(gl)_
ANKHD1	Phosphorylation	S1591	0.654	0.618	_GGGAGGNS(ph)DSDNLDSTDCNSESSSGGK_
ANKHD1	Phosphorylation	S1670	-1.166	-1.618	_TVSLPLSS(ph)PNIK_
ANKHD1	Phosphorylation	S1679	-0.292	-0.261	_LNLTS(ph)PK_
ANKHD1	Phosphorylation	S1709	-0.207	-0.503	_LTVAS(ph)PK_
ANKHD1	Phosphorylation	S1940		-0.082	_ATNS(ph)PKPHMVPR_
ANKHD1	Phosphorylation	S2047		-1.010	_EHYPVSSPSSPS(ph)PPAQPGGVSR_
ANKHD1	Phosphorylation	S2067	-0.740	-0.723	_NSPLDCGSAS(ph)PNK_
ANKHD1	Phosphorylation	S2401	-2.130	-1.761	_APS(ph)PAPSSVPLGSEKPSNVSQDR_
ANKRD17	Phosphorylation	T12		-1.213	_ATVPVAAAT(ph)AAEGEGSPPAVAAVAGPPAAAEVGGGVGGSSR_
ANKRD17	Phosphorylation	T735		-1.561	_GGHTSVVCYLLDYPNNLLSAPPPDVTQLT(ph)PPSHDLNR_
ANKRD17	Phosphorylation	S1709	-0.207	-0.503	_LTVAS(ph)PK_
ANKRD17	Phosphorylation	S1940		-0.082	_ATNS(ph)PKPHMVPR_
ANKRD17	Phosphorylation	S2047		-1.010	_EHYPVSSPSSPS(ph)PPAQPGGVSR_
ANKRD17	Phosphorylation	S2067	-0.740	-0.723	_NSPLDCGSAS(ph)PNK_
ANKRD17	Phosphorylation	S2401	-2.130	-1.761	_APS(ph)PAPSSVPLGSEKPSNVSQDR_
ASCC1	Ubiquitylation	K335		1.263	_YNLYTAEGKYIFK(gl)_
BICC1	Phosphorylation	S679	-0.483		_LLS(ph)DPELSATESPLADK_
FMR1	Phosphorylation	T598	0.270		_T(ph)DGSISGDRQPVTVADYISR_
FMR1	Phosphorylation	S601	0.394	0.422	_TDGS(ph)ISGDRQPVTVADYISR_
FUBP1	Ubiquitylation	K133	-0.323	0.271	_IQQESGCK(gl)IQIAPDSGGLPER_
FUBP1	Ubiquitylation	K161	0.931		_SCMLTGTPESVQSAK(gl)R_
FUBP1	Phosphorylation	T174	0.487	0.294	_SCMLTGT(ph)PESVQSAK_
FUBP1	Ubiquitylation	K312		-0.157	_IQFK(gl)PDDGTTPER_
FUBP1	Ubiquitylation	K400	0.642	1.251	_GGETIK(gl)SISQQSGAR_
FUBP1	Ubiquitylation	K592	0.007	0.744	_AWEEYYKK(gl)_
FUBP3	Ubiquitylation	K186	0.850	1.240	_GGETIK(gl)QLQER_
FUBP3	Ubiquitylation	K220		2.533	_ITGDAFK(gl)VQQAR_
FUBP3	Phosphorylation	S296	0.352	-0.021	_IQFKPDDGIS(ph)PER_
FUBP3	Ubiquitylation	K526	0.642	0.714	_AWEDYYKK(gl)_
FXR1	Ubiquitylation	K57	-1.779		_LPPPPDIKK(gl)_
FXR1	Ubiquitylation	K119	-0.162		_LRPVNQNK(gl)TVK_
FXR1	Ubiquitylation	K195	0.640		_TK(gl)LMLMSR_
FXR1	Ubiquitylation	K207	0.358		_NEEATK(gl)HLECTK_
FXR1	Ubiquitylation	K273	0.852		_IYGESADAVK(gl)K_
FXR1	Ubiquitylation	K274	0.563	-0.128	_IYGESADAVKK(gl)_
FXR1	Ubiquitylation	K299	0.113	-0.131	_NLVGKVIGK(gl)_
FXR1	Ubiquitylation	K310	0.778		_VIQEIVDK(gl)SGVVR_
FXR1	Phosphorylation	S409	-0.342	-0.106	_RGPNYTSGYGTNSELSNPS(ph)ETESER_
FXR1	Phosphorylation	T598	0.270		_T(ph)DGSISGDRQPVTVADYISR_
FXR1	Phosphorylation	S601	0.394	0.422	_TDGS(ph)ISGDRQPVTVADYISR_
FXR2	Phosphorylation	T598	0.270		_T(ph)DGSISGDRQPVTVADYISR_
FXR2	Phosphorylation	S601	0.394	0.422	_TDGS(ph)ISGDRQPVTVADYISR_
HDLBP	Phosphorylation	S31	0.021	0.223	_VATLNS(ph)EEESDPPTYK_
HDLBP	Ubiquitylation	K494		0.899	_IEGDPQGVQQAK(gl)R_
HDLBP	Ubiquitylation	K991	0.294		_YVIGQK(gl)GSGIRK_
HNRNPK	Ubiquitylation	K34	-0.398	0.033	_RPAEDMEEEQAFK(gl)R_
HNRNPK	Ubiquitylation	K52	1.081	1.257	_ILLQSK(gl)NAGAVIGK_
HNRNPK	Ubiquitylation	K60	0.068		_NAGAVIGK(gl)GGK(gl)NIK_
HNRNPK	Ubiquitylation	K63	-0.065	0.839	_NAGAVIGK(gl)GGK(gl)NIK_
HNRNPK	Phosphorylation	S116	0.499	0.377	_IIPTLEEGLQLPS(ph)PTATSQLPLESDAVECLNYQHYK_
HNRNPK	Phosphorylation	T118	0.679		_KIIPTLEEGLQLPSPT(ph)ATSQLPLESDAVECLNYQHYK_
HNRNPK	Phosphorylation	T120		0.365	_IIPTLEEGLQLPSPTAT(ph)SQLPLESDAVECLNYQHYK_
HNRNPK	Ubiquitylation	K163	0.329		_LLIHQSLAGGIIGVK(gl)GAK_
HNRNPK	Ubiquitylation	K179	-0.020	-0.161	_ENTQTTIK(gl)LFQECCPHSTDR_
HNRNPK	Ubiquitylation	K198	-0.013	0.077	_VVLIGGK(gl)PDR_
HNRNPK	Phosphorylation	S216	0.474	0.302	_IILDLISES(ph)PIK_
HNRNPK	Ubiquitylation	K219	-0.125	0.098	_IILDLISESPIK(gl)GR_
HNRNPK	Phosphorylation	S284	0.141	-0.133	_RDYDDMS(ph)PR_
HNRNPK	Phosphorylation	S379	-0.481	0.342	_GS(ph)YGDLGGPIITTQVTIPK_
HNRNPK	Ubiquitylation	K405	0.830	0.378	_DLAGSIIGK(gl)GGQR_
IGF2BP1	Ubiquitylation	K66	0.468	0.007	_VELQGK(gl)R_
IGF2BP1	Phosphorylation	S181	0.145	0.078	_QGS(ph)PVAAGAPAK_
IGF2BP1	Ubiquitylation	K190	-2.143	-1.004	_QGSPVAAGAPAK(gl)QQQVDIPLR_
IGF2BP1	Ubiquitylation	K272	-1.062	-0.765	_DTK(gl)TADEVPLK_
IGF2BP1	Ubiquitylation	K294	-0.976	0.052	_LIGK(gl)EGR_
IGF2BP1	Ubiquitylation	K300	-0.107		_NLK(gl)KVEQDTETK_
IGF2BP1	Phosphorylation	S313		0.221	_ITIS(ph)SLQDLTLYNPER_
IGF2BP1	Phosphorylation	S314	0.255		_ITISS(ph)LQDLTLYNPER_
IGF2BP1	Ubiquitylation	K330	0.912	0.577	_TITVK(gl)GAIENCCR_
IGF2BP1	Ubiquitylation	K346		0.773	_AEQEIMKK(gl)_
IGF2BP1	Ubiquitylation	K429	0.375		_GQHIK(gl)QLSR_
IGF2BP1	Ubiquitylation	K440	-1.281	-1.065	_FASASIK(gl)IAPPETPDSK_
IGF2BP1	Ubiquitylation	K450	-1.512	-1.678	_IAPPETPDSK(gl)VR_
IGF2BP1	Ubiquitylation	K465	-0.956	-0.267	_MVIITGPPEAQFK(gl)AQGR_
IGF2BP1	Ubiquitylation	K475	1.590	2.237	_LK(gl)EENFFGPK_
IGF2BP1	Ubiquitylation	K561	-0.386	0.027	_DILAQVK(gl)QQHQK_
IGF2BP2	Phosphorylation	S167		-0.503	_ISYIPDEEVS(ph)SPSPPQR_
IGF2BP2	Phosphorylation	S168	-0.699	-0.755	_ISYIPDEEVSS(ph)PSPPQR_
IGF2BP2	Phosphorylation	S170	-0.581	-0.451	_ISYIPDEEVSSPS(ph)PPQR_
IGF2BP2	Ubiquitylation	K276	-1.533		_EADETK(gl)LAEEIPLK_
IGF2BP2	Ubiquitylation	K468	-1.652	-0.521	_FAGASIK(gl)IAPAEGPDVSER_
IGF2BP2	Ubiquitylation	K503	-0.285		_LK(gl)EENFFNPK_
IGF2BP2	Ubiquitylation	K594		-0.483	_QQEQK(gl)YPQGVASQR_
IGF2BP3	Ubiquitylation	K190	-1.912		_QGSPGSVSK(gl)QKPCDLPLR_
IGF2BP3	Ubiquitylation	K272	-0.328	-0.293	_EAQDIK(gl)FTEEIPLK_
IGF2BP3	Ubiquitylation	K450	-1.812	-0.838	_IAPAEAPDAK(gl)VR_
IGF2BP3	Phosphorylation	T528	0.210	0.270	_DQT(ph)PDENDQVVVK_
IGF2BP3	Ubiquitylation	K567	-1.268	-1.607	_QHQQQK(gl)ALQSGPPQSR_
KHDRBS1	Phosphorylation	S18	0.745	-0.921	_S(ph)GSM(ox)DPSGAHPSVR_
KHDRBS1	Phosphorylation	S20	0.944	-0.215	_SGS(ph)M(ox)DPSGAHPSVR_
KHDRBS1	Phosphorylation	S58	9.021		_AS(ph)PATQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVK_
KHDRBS1	Ubiquitylation	K165	-0.612	0.332	_VLIPVK(gl)QYPK_
KHDRBS1	Ubiquitylation	K169	-0.739	0.728	_QYPK(gl)FNFVGK_
KHDRBS1	Ubiquitylation	K185	0.103	0.578	_ILGPQGNTIK(gl)R_
KHDRBS1	Ubiquitylation	K194	0.511		_LQEETGAK(gl)ISVLGK_
KHDRBS1	Ubiquitylation	K432	-1.686		_APPARPVK(gl)GAYR_
KHDRBS2	Ubiquitylation	K165	-0.612	0.332	_VLIPVK(gl)QYPK_
KHDRBS2	Ubiquitylation	K169	-0.739	0.728	_QYPK(gl)FNFVGK_
KHNYN	Phosphorylation	S51	0.181	-0.288	_PAS(ph)PDRFAVSAEAENK_
KHNYN	Ubiquitylation	K298	0.069	0.239	_GDTYAVEK(gl)EGGK_
KHNYN	Ubiquitylation	K656	-0.116		_GFAEHGK(gl)QQQGR_
KHSRP	Phosphorylation	T100	0.619		_IGGDAATTVNNST(ph)PDFGFGGQK_
KHSRP	Ubiquitylation	K109	-0.384	0.232	_IGGDAATTVNNSTPDFGFGGQK(gl)R_
KHSRP	Ubiquitylation	K122	-0.502	-1.429	_QLEDGDQPESKK(gl)_
KHSRP	Phosphorylation	S125	1.265	1.949	_KLAS(ph)QGDSISSQLGPIHPPPR_
KHSRP	Ubiquitylation	K169	0.608		_GGEQINK(gl)IQQDSGCK_
KHSRP	Ubiquitylation	K177	-0.480	-0.130	_IQQDSGCK(gl)VQISPDSGGLPER_
KHSRP	Phosphorylation	S181	0.331	0.424	_VQIS(ph)PDSGGLPER_
KHSRP	Ubiquitylation	K203	0.612		_SVSLTGAPESVQK(gl)AK_
KHSRP	Ubiquitylation	K205		0.356	_SVSLTGAPESVQKAK(gl)_
KHSRP	Ubiquitylation	K251	0.622	1.298	_AGLVIGK(gl)GGETIK_
KHSRP	Ubiquitylation	K257	0.850	1.240	_GGETIK(gl)QLQER_
KHSRP	Phosphorylation	S274	-0.095	1.644	_MILIQDGS(ph)QNTNVDKPLR_
KHSRP	Phosphorylation	T277	0.126	1.450	_MILIQDGSQNT(ph)NVDKPLR_
KHSRP	Ubiquitylation	K359	-0.109		_IQFK(gl)QDDGTGPEK_
KHSRP	Phosphorylation	S480	0.929	-0.004	_LFIIRGS(ph)PQQIDHAK_
KHSRP	Ubiquitylation	K628	0.007	0.744	_K(gl)IGQQPQQPGAPPQQDYTK_
KRR1	Phosphorylation	S3	0.713	0.330	_(ac)MAS(ph)PS(ph)LER_
KRR1	Ubiquitylation	K106	1.542		_K(gl)TFDPYIIIR_
KRR1	Ubiquitylation	K168	1.470		_LIGPK(gl)GSTLK_
KRR1	Ubiquitylation	K230	1.987		_ELAK(gl)DSELR_
KRR1	Ubiquitylation	K340	1.231		_EASTETK(gl)IDVASIK_
KRR1	Ubiquitylation	K349	2.495		_IDVASIKEK(gl)_
MEX3A	Phosphorylation	S462		1.523	_LGGGGLRS(ph)PGGGR_
N4BP1	Phosphorylation	T242	0.090	0.086	_AGT(ph)PVSELTK_
N4BP1	Phosphorylation	S300	0.738	1.001	_KQFS(ph)LENVQEGEILHDAK_
N4BP1	Ubiquitylation	K412	0.502		_NK(gl)GVYSSTNELTTDSTPK_
NYNRIN	Phosphorylation	S660	-1.993	-1.417	_APAAS(ph)KAPAAPK_
PCBP1	Ubiquitylation	K31		-0.219	_EVGSIIGK(gl)KGESVK_
PCBP1	Ubiquitylation	K32	0.838	0.772	_EVGSIIGKK(gl)_
PCBP1	Ubiquitylation	K115	0.132	1.214	_LVVPATQCGSLIGK(gl)GGCK_
PCBP1	Phosphorylation	S171	0.504	0.145	_QICLVMLETLS(ph)QSPQGR_
PCBP1	Phosphorylation	S173	0.607	0.607	_QICLVMLETLSQS(ph)PQGR_
PCBP1	Phosphorylation	S189	-0.507	-0.654	_VMTIPYQPMPAS(ph)SPVICAGGQDR_
PCBP1	Phosphorylation	S190	-0.743	-0.927	_VMTIPYQPMPASS(ph)PVICAGGQDR_
PCBP1	Phosphorylation	S264		0.094	_QQSHFAM(ox)M(ox)HGGTGFAGIDSSS(ph)PEVK_
PCBP1	Ubiquitylation	K314	-0.244	0.190	_QM(ox)SGAQIK(gl)IANPVEGSSGR_
PCBP1	Ubiquitylation	K351	0.034	-0.310	_LSSEK(gl)GMGCS_
PCBP2	Ubiquitylation	K35	0.116		_LLMHGK(gl)EVGSIIGK_
PCBP2	Ubiquitylation	K43		-0.219	_EVGSIIGK(gl)KGESVK_
PCBP2	Ubiquitylation	K44	0.838	0.772	_EVGSIIGKK(gl)_
PCBP2	Ubiquitylation	K127	-0.025	-0.311	_LVVPASQCGSLIGK(gl)GGCK_
PCBP2	Phosphorylation	Y182		-0.851	_GVTIPY(ph)RPKPSSSPVIFAGGQDR_
PCBP2	Phosphorylation	S187	-1.067	-0.515	_PS(ph)SSPVIFAGGQDR_
PCBP2	Phosphorylation	S188	-0.453	-0.085	_PSS(ph)SPVIFAGGQDR_
PCBP2	Phosphorylation	S189		-0.396	_PSSS(ph)PVIFAGGQLTK_
PCBP2	Phosphorylation	S189	-0.991	-0.649	_PKPSSS(ph)PVIFAGGQDR_
PCBP2	Phosphorylation	S272	-0.207	-0.267	_LHQLAM(ox)QQSHFPM(ox)THGNTGFSGIESSS(ph)PEVK_
PCBP2	Ubiquitylation	K317	0.274	0.191	_QGAK(gl)INEIR_
PCBP2	Ubiquitylation	K330	-0.123	0.488	_QM(ox)SGAQIK(gl)IANPVEGSTDR_
PCBP3	Ubiquitylation	K35	0.116		_LLMHGK(gl)EVGSIIGK_
PCBP3	Ubiquitylation	K43		-0.219	_EVGSIIGK(gl)KGESVK_
PCBP3	Ubiquitylation	K44	0.838	0.772	_EVGSIIGKK(gl)_
PCBP3	Ubiquitylation	K127	-0.025	-0.311	_LVVPASQCGSLIGK(gl)GGCK_
PCBP3	Ubiquitylation	K317	0.274	0.191	_QGAK(gl)INEIR_
PCBP3	Ubiquitylation	K330	-0.123	0.488	_QM(ox)SGAQIK(gl)IANPVEGSTDR_
PNO1	Ubiquitylation	K132	-0.357		_DVSALTK(gl)AADFVK_
QKI	Ubiquitylation	K91	-0.019	-0.167	_LYVPVK(gl)EYPDFNFVGR_
QKI	Ubiquitylation	K111	0.236	0.638	_GLTAK(gl)QLEAETGCK_
QKI	Ubiquitylation	K190		-0.178	_LLVPAAEGEDSLK(gl)K_
QKI	Ubiquitylation	K191	0.259	-0.178	_LLVPAAEGEDSLKK(gl)_
SF1	Ubiquitylation	K78	0.110		_NIEKECNAK(gl)IMIR_
SF1	Phosphorylation	S80	-1.127	-1.226	_TGDLGIPPNPEDRS(ph)PS(ph)PEPIYNSEGK_
SF1	Phosphorylation	S82	-1.197	-0.218	_SPS(ph)PEPIYNSEGK_
SF1	Ubiquitylation	K131	0.313	0.887	_NILK(gl)QGIETPEDQNDLRK_
SF1	Phosphorylation	S181		-0.584	_YACGLWGLS(ph)PASR_