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Query: TDRD7

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TDRD7 0 2.187 -0.390 1.130

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TDRD7 Ubiquitylation K576 0.029 1.028 _FCSLSFQATK(gl)CK_

Background Information for TDRD7:


Pubmed-TDRD7 »
Uniprot-TDRD7 »
Biogrid-TDRD7 »
ProteomicsDB-TDRD7 »

Tumorportal-TDRD7 »
COSMIC-TDRD7 »
GenomeRNAi-TDRD7 »
Genecards-TDRD7


Protein-protein Interactions for TDRD7
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CDK17 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM64A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GABPB1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TDRD7
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Tudor IPR002999 0.28


Protein complexes (CORUM database) featuring TDRD7
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TDRD7
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0030529 ribonucleoprotein complex Database 8.45
Category members GO Category GO:0047485 protein N-terminus binding Database 1.84
Category members GO Category GO:0003729 mRNA binding Database 1.38
Category members GO Category GO:0005759 mitochondrial matrix Database 0.59
Category members Pathway Pathway_985 PID_AURORA_A_PATHWAY 0 0.34
Category members GO Category GO:0010608 posttranscriptional regulation of gene expression Database 0.25
Category members GO Category GO:0070306 lens fiber cell differentiation Database 0.13
Category members GO Category GO:0002089 lens morphogenesis in camera-type eye Database 0.01
Category members GO Category GO:0007281 germ cell development Database 0
Category members GO Category GO:0007283 spermatogenesis Database 0
Category members GO Category GO:0033391 chromatoid body Database 0
Category members GO Category GO:0043186 P granule Database 0


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