RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
CCDC88A	1	-0.320	0.670	0.250
CCDC88A	1	-0.160	-0.260	0.250
PAM	1	0.410	-0.620
RICTOR	1	-0.330	0.710
RICTOR	1	-0.270	0.570
ILK	1	-1.560	3.680				-0.463	-0.527
PDGFA	1	0.190	-0.340		-2.109	1.885
GPM6B	0	-0.810	0.230
GPM6B	0	-0.810	0.230
ROCK1	0	-1.420	2.380		-0.112	-0.732
RHOQ	0	0.310	-0.560	0.486			-0.364	-0.568
RHOQ	0	1.120	-0.210	0.486			-0.364	-0.568
RHOQ	0	0.310	-0.560
RHOQ	0	1.120	-0.210
LRP1	0	-0.360	0.400				1.199	1.016
ROCK2	0	-1.660	2.330
EPHA5	0	-0.280	0.790
PAK1	0	1.190	-0.630
DMTN	0	0.810	-0.530
VANGL2	0	-1.030	1.450
DLC1	0	-0.650	0.390
TSC1	0	1.100	-0.150
CRK	0	-0.790	0.230
MLST8	0	-0.170	0.220
MTOR	0	-0.680	0.150	0.757			0.074	0.101

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CCDC88A	Phosphorylation	S1387		-0.568	_FYDPS(ph)PPR_
CCDC88A	Phosphorylation	S1587		2.636	_VHASRPAS(ph)LDSGR_
CCDC88A	Phosphorylation	T1673	0.950	0.959	_T(ph)GSPGSEVVTLQQFLEESNK_
CCDC88A	Phosphorylation	S1675	0.884	0.947	_TGS(ph)PGSEVVTLQQFLEESNK_
CCDC88A	Phosphorylation	S1700	0.947		_S(ph)SSQENLLDEVM(ox)K_
CCDC88A	Phosphorylation	S1702	0.387	1.065	_SSS(ph)QENLLDEVMK_
CCDC88A	Phosphorylation	S1820		0.228	_RTS(ph)IHDFLTK_
CRK	Phosphorylation	S40	0.533	0.363	_DS(ph)STSPGDYVLSVSENSR_
CRK	Phosphorylation	S41	1.065	0.801	_DSS(ph)TSPGDYVLSVSENSR_
DLC1	Phosphorylation	S842		-0.139	_TGS(ph)FHGPGHISLR_
DLC1	Phosphorylation	S946		-0.497	_FSDEGDSDSALDSVSPCPSS(ph)PK_
DMTN	Phosphorylation	S26	0.446	0.434	_DSSVPGS(ph)PSSIVAK_
DMTN	Phosphorylation	S29	0.762		_DSSVPGSPSS(ph)IVAK_
DMTN	Phosphorylation	S92		-0.084	_STS(ph)PPPS(ph)PEVWADSR_
DMTN	Phosphorylation	S96	0.117	-0.084	_STS(ph)PPPS(ph)PEVWADSR_
EPHA5	Ubiquitylation	K657	0.533		_LKLPGK(gl)R_
GPM6B	Ubiquitylation	K264	0.537	1.010	_SREDCCTK(gl)F_
GPM6B	Ubiquitylation	K295	0.448	1.114	_SK(gl)EQLNSYT_
ILK	Ubiquitylation	K85		-0.777	_DIVQK(gl)LLQYK_
ILK	Ubiquitylation	K426		-0.300	_LMK(gl)ICMNEDPAK_
ILK	Ubiquitylation	K435		-2.732	_ICMNEDPAK(gl)RPK_
LRP1	Ubiquitylation	K4527	-0.315		_HSLASTDEK(gl)R_
MLST8	Phosphorylation	T3		-0.481	_(ac)MNT(ph)SPGTVGSDPVILATAGYDHTVR_
MLST8	Ubiquitylation	K245	-0.114	0.462	_FSPDSTLLATCSADQTCK(gl)IWR_
MTOR	Ubiquitylation	K309	-0.762	0.065	_DLMGFGTK(gl)PR_
MTOR	Ubiquitylation	K1257	-1.167	-0.901	_SGQGDALASGPVETGPMKK(gl)_
MTOR	Ubiquitylation	K1395		-1.255	_AYAK(gl)ALHYK_
MTOR	Ubiquitylation	K2066		-1.004	_GPQTLK(gl)ETSFNQAYGR_
MTOR	Ubiquitylation	K2166		-1.304	_IQSIAPSLQVITSK(gl)QRPR_
MTOR	Phosphorylation	T2471		0.329	_KT(ph)GTTVPESIHSFIGDGLVKPEALNK_
PAK1	Phosphorylation	S174	-1.439	-0.597	_AVSETPAVPPVS(ph)EDEDDDDDDATPPPVIAPRPEHTK_
PAK1	Phosphorylation	T212		0.312	_SVIEPLPVT(ph)PTR_
PAK1	Phosphorylation	T219	-0.560	-0.962	_DVAT(ph)SPISPTENNTT(ph)PPDALTR_
PAK1	Phosphorylation	S220	-0.916	-0.774	_DVATS(ph)PISPTENNTTPPDALTR_
PAK1	Phosphorylation	S223	1.033	0.153	_DVATSPIS(ph)PTENNTTPPDALTR_
PAK1	Phosphorylation	T225	-1.278		_DVATSPISPT(ph)ENNTTPPDALTR_
PAK1	Phosphorylation	T230	-1.418	-1.502	_DVATSPISPTENNTT(ph)PPDALTR_
PAM	Ubiquitylation	K716		-1.381	_TDTK(gl)EFVR_
PAM	Phosphorylation	S918	0.585	1.654	_GKGS(ph)GGLNLGNFFASR_
RHOQ	Ubiquitylation	K115	-1.745	-0.215	_AK(gl)WYPEVR_
RHOQ	Ubiquitylation	K139	0.125		_LNDMK(gl)EKPICVEQGQK_
RHOQ	Ubiquitylation	K141	0.125		_LNDMK(gl)EKPICVEQGQK_
RHOQ	Ubiquitylation	K142	0.492		_LDLRDDK(gl)DTIEK_
RHOQ	Ubiquitylation	K152	0.099	-0.292	_K(gl)LTPITYPQGLAMAK_
RHOQ	Ubiquitylation	K166	-0.981	-0.655	_LTPITYPQGLAMAK(gl)EIGAVK_
RHOQ	Ubiquitylation	K172	1.026	0.412	_EIGAVK(gl)YLECSALTQR_
RHOQ	Ubiquitylation	K185	-0.113	0.578	_GLK(gl)TVFDEAIR_
RHOQ	Ubiquitylation	K202	-1.379	-1.447	_AVLCPPPVK(gl)KR_
RHOQ	Ubiquitylation	K203	-1.708	-1.447	_AVLCPPPVKK(gl)_
RICTOR	Phosphorylation	S21	-0.279	0.249	_NDS(ph)GEENVPLDLTR_
RICTOR	Ubiquitylation	K830	-0.874		_GYVAKQLEK(gl)_
RICTOR	Phosphorylation	S1284	2.625		_SNS(ph)VSLVPPGSSHTLPR_
RICTOR	Phosphorylation	S1302	-0.560	0.260	_RAQS(ph)LKAPSIATIK_
RICTOR	Phosphorylation	S1388	0.507		_ALSYAS(ph)LDKEDLLSPINQNTLQR_
ROCK1	Phosphorylation	S1105	-0.245	-0.845	_LLDLSDSTSVAS(ph)FPSADETDGNLPESR_
ROCK2	Ubiquitylation	K1222	-0.679		_ADAK(gl)EIPR_
TSC1	Phosphorylation	S505	0.141	0.350	_GGFDS(ph)PFYR_
VANGL2	Ubiquitylation	K379	0.582		_LQEEEQK(gl)NPR_