bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Category

Results for the Category
lipopolysaccharide biosynthetic process
(GO:0009103)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

 Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
MAPK14 2 -0.160 -0.350
MAPK9 1 0.110 -0.490
COLGALT1 1 -1.610 2.510 0.052 0.252
RNASEL 1 -0.830 1.400 1.079 -0.385 0.549 0.456
GNE 1 0.690 -0.640
RPS6KA3 1 -1.550 2.890
ALG1 0 -0.690 1.460 0.385 0.247
TRIO 0 -0.690 0.810 0.256 0.123
RIOK2 0 -0.360 0.950
HIPK2 0 -0.990 0.680
MAPKAPK5 0 1.100 -0.730
NANS 0
RIOK3 0 -0.160 0.480
IKBKB 0 0.400 0.610
PRKD2 0 0.050 0.170 0.914
PRKD2 0 0.050 0.170
CMAS 0 -0.810 1.027 0.409
CMAS 0 0.286 -0.069
PRKD3 0 0.160 0.030
PRKD3 0 0.160 0.030
RPS6KA1 0 -0.160 -0.660
RPS6KA1 0 -0.160 -0.660
PHKG2 0 -0.370 -0.400
PHKG2 0 -0.350 -0.370
MELK 0 -0.620 0.710 -0.249 -0.278
CERCAM 0 1.300 -0.820
TP53RK 0 1.015
ULK1 0 0.740 -0.520
DAPK1 0 -0.090 -0.480 -1.111
PIM3 0 0.860 -0.790

PTM Sites:

 Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
CERCAM Ubiquitylation K200 -0.325 _TAEYFPTK(gl)NR_
CMAS Ubiquitylation K56 -0.417 _GGSK(gl)GIPLK_
CMAS Ubiquitylation K61 0.241 0.327 _GIPLK(gl)NIK_
CMAS Ubiquitylation K185 0.037 0.119 _WSEIQK(gl)GVR_
CMAS Ubiquitylation K200 -2.005 _EVTEPLNLNPAK(gl)RPR_
CMAS Ubiquitylation K382 0.226 0.136 _EVAYLGNEVSDEECLK(gl)R_
CMAS Ubiquitylation K399 0.451 0.674 _VGLSGAPADACSTAQK(gl)AVGYICK_
DAPK1 Ubiquitylation K939 0.937 0.001 _LFVLDAGASGSK(gl)DMK_
GNE Ubiquitylation K210 1.913 _MWLGDDVK(gl)SK_
GNE Ubiquitylation K359 -2.895 _QYPCSK(gl)IYGDGNAVPR_
GNE Ubiquitylation K385 -1.344 _SIDLQEPLQK(gl)K_
GNE Ubiquitylation K386 -1.344 _SIDLQEPLQK(gl)K_
GNE Ubiquitylation K637 -0.326 _LGNAK(gl)AQSILR_
HIPK2 Ubiquitylation K492 -0.060 _YISQTQGLPAEYLLSAGTK(gl)TTR_
HIPK2 Ubiquitylation K614 -0.350 _SCFQNMEICK(gl)R_
IKBKB Ubiquitylation K106 0.253 _K(gl)YLNQFENCCGLR_
IKBKB Phosphorylation S672 0.670 0.244 _GPVSGS(ph)PDSMNASR_
MAPK14 Phosphorylation S2 3.221 3.623 _(ac)S(ph)QERPTFYR_
MAPK14 Phosphorylation T180 0.958 1.087 _HTDDEM(ox)T(ph)GYVATR_
MAPK14 Phosphorylation Y182 1.388 1.374 _HTDDEM(ox)TGY(ph)VATR_
MAPK14 Ubiquitylation K249 0.073 -1.380 _LVGTPGAELLKK(gl)_
MAPK9 Phosphorylation Y185 3.533 _TACTNFMMTPY(ph)VVTR_
MAPKAPK5 Phosphorylation T182 -0.559 -0.706 _IDQGDLM(ox)T(ph)PQFTPYYVAPQVLEAQR_
MELK Ubiquitylation K55 -0.604 _IK(gl)TEIEALK_
MELK Ubiquitylation K419 -1.760 _TPANK(gl)LK_
MELK Ubiquitylation K597 -0.858 _GYTLK(gl)CQTQSDFGK_
MELK Ubiquitylation K650 -0.307 _LVEDILSSCK(gl)V_
NANS Ubiquitylation K52 0.274 0.778 _ECGADCAK(gl)FQK_
NANS Ubiquitylation K290 -0.004 _QLLPCEMACNEK(gl)LGK_
PHKG2 Ubiquitylation K265 0.212 _SSTVK(gl)DLISR_
PIM3 Ubiquitylation K30 -0.621 _ILQPAK(gl)ADKESFEK_
PIM3 Ubiquitylation K69 0.591 _IADGLPVAVK(gl)HVVK_
PIM3 Ubiquitylation K172 -0.139 _DIK(gl)DENLLVDLR_
PRKD2 Phosphorylation S197 0.239 0.895 _RLS(ph)STSLASGHSVR_
PRKD2 Phosphorylation T211 -0.119 _LGT(ph)SESLPCTAEELSR_
PRKD2 Phosphorylation S212 0.113 _LGTS(ph)ESLPCTAEELSR_
PRKD2 Phosphorylation S214 0.216 0.302 _LGTSES(ph)LPCTAEELSR_
PRKD2 Phosphorylation S710 -0.413 -0.511 _S(ph)VVGTPAYLAPEVLLNQGYNR_
PRKD2 Phosphorylation T714 -0.279 _S(ph)VVGTPAYLAPEVLLNQGYNR_
PRKD2 Ubiquitylation K730 1.177 _IIGEK(gl)SFR_
PRKD2 Phosphorylation S886 -0.718 -0.305 _DLGGACPPQDHDMQGLAERIS(ph)VL_
PRKD3 Phosphorylation S30 -1.576 _SVLPTAIPAVLPAAS(ph)PCS(ph)SPK_
PRKD3 Phosphorylation S31 -1.576 _SVLPTAIPAVLPAASPCS(ph)SPK_
PRKD3 Phosphorylation S364 -0.830 -0.918 _GLDDTEEPS(ph)PPEDK_
PRKD3 Phosphorylation S399 0.023 0.162 _TIS(ph)PSTSNNIPLMR_
PRKD3 Ubiquitylation K730 1.177 _IIGEK(gl)SFR_
PRKD3 Phosphorylation S744 -0.226 -0.287 _S(ph)VVGTPAYLAPEVLR_
RIOK2 Phosphorylation S24 0.576 0.471 _EGS(ph)EFS(ph)FSDGEVAEK_
RIOK2 Phosphorylation S27 0.780 0.643 _EGSEFS(ph)FSDGEVAEK_
RIOK2 Phosphorylation S29 0.578 0.519 _EGSEFSFS(ph)DGEVAEK_
RIOK2 Phosphorylation S72 -0.068 0.475 _SSGDPEQIKEDS(ph)LSEESADAR_
RIOK2 Phosphorylation S74 0.493 _SSGDPEQIKEDSLS(ph)EESADAR_
RIOK2 Phosphorylation S82 0.224 0.220 _S(ph)FEM(ox)TEFNQALEEIK_
RIOK2 Phosphorylation S134 -0.132 0.061 _VQGGVPAGS(ph)DEYEDECPHLIALSSLNR_
RIOK3 Phosphorylation S8 -0.711 -0.281 _(ac)MDLVGVAS(ph)PEPGTAAAWGPSK_
RIOK3 Ubiquitylation K158 -2.869 _KGFIGK(gl)GK_
RIOK3 Ubiquitylation K160 -2.484 _GK(gl)DITTKHDEVVCGR_
RIOK3 Ubiquitylation K300 -3.131 -0.235 _TTLNEFK(gl)NR_
RIOK3 Ubiquitylation K318 -0.729 _FSK(gl)LNPR_
RIOK3 Ubiquitylation K456 -0.087 _NVSQFFQKGGVK(gl)_
RNASEL Phosphorylation S21 0.047 -0.107 _YIASVQGSTPS(ph)PR_
RNASEL Ubiquitylation K94 -0.527 _SVELNPTQK(gl)DLVLK_
RNASEL Ubiquitylation K106 0.667 _IAELLCK(gl)NDVTDGR_
RNASEL Ubiquitylation K776 -0.046 -0.521 _NADSEIK(gl)HSTPSPTR_
RNASEL Phosphorylation S788 0.362 -0.041 _YSLS(ph)PSK_
RNASEL Phosphorylation S796 0.553 0.575 _SYKYS(ph)PK_
RNASEL Phosphorylation S955 -0.786 0.030 _FESPATGILS(ph)PR_
RNASEL Phosphorylation S1160 -1.328 _NHETDGGS(ph)AHGDDDDDGPHFEPVVPLPDKIEVK_
RNASEL Ubiquitylation K1220 0.641 _GIGNVK(gl)ILR_
RNASEL Phosphorylation T1396 -0.510 -0.398 _ELVGPPLAETVFT(ph)PKT(ph)SPENVQDR_
RNASEL Phosphorylation T1399 -0.665 _ELVGPPLAETVFT(ph)PKT(ph)SPENVQDR_
RNASEL Phosphorylation S1400 -0.440 0.082 _ELVGPPLAETVFT(ph)PKTS(ph)PENVQDR_
RNASEL Phosphorylation S1456 0.018 0.508 _SGSSFVHQAS(ph)FK_
RNASEL Phosphorylation S1573 0.499 _CVACQNPDKPS(ph)PSTSVPAPASFK_
RNASEL Ubiquitylation K1963 -0.768 _STSGEGFQFGK(gl)K_
RNASEL Ubiquitylation K1964 -0.768 _STSGEGFQFGK(gl)K_
RNASEL Ubiquitylation K2061 0.441 0.872 _GLGNLK(gl)ILK_
RNASEL Phosphorylation S2250 1.539 -0.701 _EDALDDSVSSSSVHASPLAS(ph)SPVRK_
RNASEL Phosphorylation S2251 -0.023 _EDALDDSVSSSSVHASPLASS(ph)PVRK_
RNASEL Phosphorylation S2276 0.074 0.029 _SALS(ph)PSKSPAK_
RNASEL Phosphorylation S2280 0.065 0.135 _SALSPSKS(ph)PAK_
RNASEL Phosphorylation T2293 0.717 0.584 _LNQSGTSVGT(ph)DEESDVTQEEER_
RNASEL Ubiquitylation K2358 0.436 0.327 _GIGDIK(gl)ILQNYDNK_
RNASEL Ubiquitylation K2379 -0.664 0.332 _DQVLK(gl)LCANHR_
RNASEL Ubiquitylation K2396 -0.954 0.190 _ITPDMTLQNMK(gl)GTER_
RNASEL Phosphorylation S2454 0.335 0.393 _DSLIT(ph)PHVS(ph)R_
RNASEL Phosphorylation S2510 -0.171 0.107 _AVVS(ph)PPKFVFGSESVK_
RNASEL Ubiquitylation K2592 -0.298 _NSDIEQSSDSK(gl)VK_
RNASEL Ubiquitylation K2594 -0.298 _NSDIEQSSDSK(gl)VK_
RNASEL Phosphorylation T2613 -0.775 -0.709 _NLFASFPTEESSINYTFKT(ph)PEK_
RNASEL Ubiquitylation K2650 0.439 _ALATK(gl)LK_
RNASEL Phosphorylation Y2666 0.598 _NRPDY(ph)VSEEEEDDEDFETAVKK_
RNASEL Phosphorylation S2668 0.584 0.573 _NRPDYVS(ph)EEEEDDEDFETAVK_
RNASEL Phosphorylation S2804 0.874 _SIS(ph)SPSVSSETM(ox)DKPVDLSTR_
RNASEL Phosphorylation S2805 -0.018 0.448 _SISS(ph)PSVSSETMDKPVDLSTR_
RNASEL Phosphorylation S2900 -0.395 -0.513 _VGEDEDGS(ph)DEEVVHNEDIHFEPIVSLPEVEVK_
RNASEL Ubiquitylation K2935 -1.498 0.007 _SGEEDEEILFK(gl)ER_
RNASEL Phosphorylation S3207 0.368 0.527 _IESFGS(ph)PK_
RPS6KA1 Phosphorylation S227 0.363 0.496 _AYS(ph)FCGTVEYM(ox)APEVVNR_
RPS6KA1 Phosphorylation T231 0.315 _KAYSFCGT(ph)VEYMAPEVVNR_
RPS6KA1 Ubiquitylation K316 -1.156 _LGSGPDGAEEIK(gl)R_
RPS6KA1 Phosphorylation T359 -0.149 -0.339 _T(ph)PKDSPGIPPSAGAHQLFR_
RPS6KA1 Phosphorylation S363 -0.711 -0.697 _TPKDS(ph)PGIPPSAGAHQLFR_
RPS6KA1 Ubiquitylation K566 -0.152 _ICDFGFAK(gl)QLR_
RPS6KA3 Phosphorylation S227 0.363 0.496 _AYS(ph)FCGTVEYM(ox)APEVVNR_
RPS6KA3 Phosphorylation T231 0.315 _KAYSFCGT(ph)VEYMAPEVVNR_
RPS6KA3 Ubiquitylation K322 -0.076 -0.376 _LGAGPDGVEEIK(gl)R_
RPS6KA3 Phosphorylation T365 -0.892 -1.003 _T(ph)PKDSPGIPPSANAHQLFR_
RPS6KA3 Phosphorylation S369 -0.621 -0.862 _TPKDS(ph)PGIPPSANAHQLFR_
RPS6KA3 Ubiquitylation K566 -0.152 _ICDFGFAK(gl)QLR_
RPS6KA3 Phosphorylation S715 -0.923 -0.880 _NQS(ph)PVLEPVGR_
TP53RK Phosphorylation T7 -0.376 _AT(ph)TPADGEEPAPEAEALAAAR_
TP53RK Phosphorylation T8 0.572 -0.177 _ATT(ph)PADGEEPAPEAEALAAAR_
TRIO Phosphorylation S1723 0.798 _S(ph)SMEMEGIFNHK_
TRIO Phosphorylation S1724 0.798 _S(ph)SMEMEGIFNHK_
TRIO Phosphorylation S2455 0.012 -0.418 _AGAAS(ph)PLNSPLSSAVPSLGK_
TRIO Phosphorylation S2459 0.534 _AGAAS(ph)PLNS(ph)PLSSAVPSLGK_
ULK1 Phosphorylation S450 -0.237 -0.173 _NLQS(ph)PTQFQTPR_
ULK1 Phosphorylation T468 -0.247 0.456 _SGST(ph)SPLGFAR_
ULK1 Phosphorylation S469 0.035 0.470 _SGSTS(ph)PLGFAR_
ULK1 Phosphorylation S623 -0.793 -0.874 _NPLPPILGS(ph)PTK_
ULK1 Phosphorylation T625 -0.547 -0.776 _NPLPPILGSPT(ph)K_
ULK1 Phosphorylation T636 0.087 _T(ph)PSSQNLLALLAR_
ULK1 Phosphorylation S638 -0.154 0.598 _TPS(ph)SQNLLALLAR_


.

© Copyright Svejstrup Laboratory 2015