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Query: GNE

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
GNE 1 1.587 0.690 -0.640

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
GNE Ubiquitylation K637 -0.326 _LGNAK(gl)AQSILR_
GNE Ubiquitylation K385 -1.344 _SIDLQEPLQK(gl)K_
GNE Ubiquitylation K386 -1.344 _SIDLQEPLQK(gl)K_
GNE Ubiquitylation K359 -2.895 _QYPCSK(gl)IYGDGNAVPR_
GNE Ubiquitylation K210 1.913 _MWLGDDVK(gl)SK_

Background Information for GNE:


Pubmed-GNE »
Uniprot-GNE »
Biogrid-GNE »
ProteomicsDB-GNE »

Tumorportal-GNE »
COSMIC-GNE »
GenomeRNAi-GNE »
Genecards-GNE


Protein-protein Interactions for GNE
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait C2orf68 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LGALS3BP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TIMM50 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF764 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in GNE
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Hexokinase IPR001312 0.04


Protein complexes (CORUM database) featuring GNE
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring GNE
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0006047 UDP-N-acetylglucosamine metabolic process Database 0.3
Category members GO Category GO:0016787 hydrolase activity Database 0.22
Category members Pathway Pathway_61 KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM 0 0.04
Category members GO Category GO:0006045 N-acetylglucosamine biosynthetic process Database 0
Category members GO Category GO:0006054 N-acetylneuraminate metabolic process Database 0
Category members GO Category GO:0007155 cell adhesion Database 0
Category members GO Category GO:0009103 lipopolysaccharide biosynthetic process Database 0
Category members GO Category GO:0009384 N-acylmannosamine kinase activity Database 0
Category members GO Category GO:0046380 N-acetylneuraminate biosynthetic process Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


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