bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
CF IIAm complex (Cleavage factor IIAm complex)
(1141)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
PCF11 3 -2.050 3.820 0.235
PCF11 3 -2.050 3.820 -1.031 1.582 3.004 -1.330 -0.783
TJP1 2 -0.410 1.150
TJP1 2 -0.410 1.150 -0.039 -0.011
TJP1 2 -0.410 1.150
ERCC3 2 -1.110 1.490 2.619 2.418 0.499
SFPQ 1 -1.880 4.270 0.328 0.568 -0.141 -0.140 0.032
CAPRIN1 1 0.660 -0.210 0.762 1.503 0.379 0.094 -0.014
CLP1 1 1.560 -1.130 -2.044 -4.197
GTF2H4 1 -1.010 2.070 1.371 2.504
PTBP1 0 -1.070 1.860 -0.617 -1.830 -1.113
MRE11A 0 1.600 -0.730 0.145 0.420
MRE11A 0 1.600 -0.730 0.023 0.453 0.150
U2AF2 0 -0.290 1.210 0.056 0.174 -0.026
CPSF6 0 -0.660 0.180 1.002 0.250 0.499 0.312 -0.256
CPSF3 0 0.760 -0.720 -0.001 -0.206 0.455 -0.433 0.066
CPSF7 0 0.850 -0.560 0.101 -0.052 -0.087 0.114 0.376
U2AF1 0 -0.080 -0.050 0.129 -0.015 0.165 0.219 0.101
NUDT21 0 -0.700 0.830 0.214 -0.359 0.236 0.333 0.307
DHX16 0 0.630 -1.000 -0.397 -0.261 -0.209 -0.496 -0.108

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
CAPRIN1 Ubiquitylation K63 1.347 _QILGVIDK(gl)K_
CAPRIN1 Ubiquitylation K64 1.213 1.269 _QILGVIDKK(gl)_
CAPRIN1 Ubiquitylation K74 0.036 _GK(gl)LDDYQER_
CAPRIN1 Ubiquitylation K125 1.014 _SFMALSQDIQK(gl)TIK_
CAPRIN1 Ubiquitylation K223 -0.252 -0.360 _EK(gl)PVCGTTYK_
CAPRIN1 Ubiquitylation K231 0.419 _EKPVCGTTYK(gl)VLK_
CLP1 Ubiquitylation K138 1.918 0.745 _VMVVGPTDVGK(gl)STVCR_
CLP1 Ubiquitylation K292 0.258 0.199 _TVLLPK(gl)SGGVVER_
CPSF3 Ubiquitylation K348 0.384 _ELFESWCTDK(gl)R_
CPSF3 Ubiquitylation K428 0.656 0.535 _LK(gl)AALIR_
CPSF3 Ubiquitylation K465 0.422 _NTEAVTLNFRGEKLAK(gl)_
CPSF3 Ubiquitylation K474 -0.536 _VMGFLADKK(gl)PEQGQR_
CPSF3 Ubiquitylation K487 0.072 0.155 _VSGILVK(gl)R_
CPSF3 Ubiquitylation K604 -0.159 _K(gl)LEMHVYSK_
CPSF6 Ubiquitylation K79 -0.081 _GAAPNVVYTYTGK(gl)R_
CPSF6 Ubiquitylation K138 0.018 _GFALVGVGSEASSK(gl)K_
CPSF6 Ubiquitylation K139 -0.782 _GFALVGVGSEASSKK(gl)_
CPSF6 Ubiquitylation K185 -0.516 -0.824 _TTQSGQMSGEGK(gl)AGPPGGSSR_
CPSF6 Phosphorylation T404 1.179 1.083 _EMDT(ph)ARTPLSEAEFEEIMNR_
CPSF6 Phosphorylation T407 1.386 1.306 _EMDTART(ph)PLSEAEFEEIMNR_
CPSF7 Phosphorylation S48 -0.955 -1.077 _SSS(ph)TEPPPPVR_
CPSF7 Phosphorylation T203 -0.630 -1.317 _DSSDSADGRAT(ph)PSENLVPSSAR_
DHX16 Phosphorylation S103 0.525 1.462 _LLEDS(ph)EESSEETVSR_
DHX16 Phosphorylation S106 0.698 0.697 _LLEDS(ph)EES(ph)SEETVSR_
DHX16 Phosphorylation S107 0.644 _LLEDS(ph)EESS(ph)EETVSR_
DHX16 Phosphorylation T155 0.840 0.314 _QQT(ph)EKPESEDEWER_
DHX16 Phosphorylation S160 0.943 0.503 _QQTEKPES(ph)EDEWER_
GTF2H4 Ubiquitylation K452 -2.338 _LMVVTPAGHSDVK(gl)R_
MRE11A Ubiquitylation K387 0.442 _FSQK(gl)FVDR_
NUDT21 Ubiquitylation K29 -0.121 -0.076 _YIQQTK(gl)PLTLER_
NUDT21 Ubiquitylation K56 -1.058 0.450 _EPLYEK(gl)DSSVAAR_
NUDT21 Ubiquitylation K73 0.158 _MREEFDK(gl)IGMR_
NUDT21 Ubiquitylation K122 -1.445 _LPGGELNPGEDEVEGLK(gl)R_
NUDT21 Ubiquitylation K189 -0.510 _ALFAVPK(gl)NYK_
NUDT21 Ubiquitylation K192 -0.730 -0.836 _ALFAVPKNYK(gl)_
PCF11 Phosphorylation S494 0.108 0.338 _SPIIHS(ph)PK_
PCF11 Phosphorylation S705 -0.513 -0.572 _EEQRS(ph)PFNDRFPLK_
PCF11 Phosphorylation S800 0.255 0.405 _RLS(ph)PISGSR_
PCF11 Ubiquitylation K1278 0.074 _LLK(gl)TGILK_
PCF11 Phosphorylation T1530 -0.702 -0.561 _IDT(ph)PPACTEESIATPSEIK_
PTBP1 Ubiquitylation K13 -0.461 0.072 _(ac)MDGIVPDIAVGTK(gl)R_
PTBP1 Ubiquitylation K92 0.474 0.219 _VTNLLMLK(gl)GK_
PTBP1 Ubiquitylation K94 1.069 0.999 _VTNLLMLKGK(gl)_
PTBP1 Ubiquitylation K134 0.323 _GQPIYIQFSNHK(gl)ELK_
PTBP1 Ubiquitylation K137 -0.157 -0.233 _ELK(gl)TDSSPNQAR_
PTBP1 Phosphorylation T138 0.390 _ELKT(ph)DSSPNQAR_
PTBP1 Phosphorylation S140 0.879 _ELKTDS(ph)SPNQAR_
PTBP1 Phosphorylation S141 0.446 0.650 _ELKTDSS(ph)PNQAR_
PTBP1 Ubiquitylation K259 0.361 _IDFSK(gl)LTSLNVK_
PTBP1 Ubiquitylation K266 0.803 -0.412 _LTSLNVK(gl)YNNDK_
PTBP1 Ubiquitylation K410 0.833 _ITLSK(gl)HQNVQLPR_
PTBP1 Ubiquitylation K428 0.281 _EGQEDQGLTK(gl)DYGNSPLHR_
PTBP1 Ubiquitylation K482 1.293 1.265 _VLFSSNGGVVK(gl)GFK_
PTBP1 Ubiquitylation K489 0.598 _FFQK(gl)DRK_
PTBP1 Ubiquitylation K528 0.710 _VSFSK(gl)STI_
SFPQ Ubiquitylation K271 0.191 _SEEK(gl)ISDSEGFK_
SFPQ Phosphorylation S273 0.863 0.625 _SEEKIS(ph)DSEGFK_
SFPQ Ubiquitylation K291 0.067 _RPGEK(gl)TYTQR_
SFPQ Ubiquitylation K330 0.013 _YGEPGEVFINK(gl)GK_
SFPQ Ubiquitylation K332 1.002 1.454 _GK(gl)GFGFIK_
SFPQ Ubiquitylation K338 0.958 _GFGFIK(gl)LESR_
SFPQ Ubiquitylation K413 0.957 0.529 _STGK(gl)GIVEFASKPAAR_
SFPQ Ubiquitylation K421 0.383 1.058 _GIVEFASK(gl)PAAR_
SFPQ Ubiquitylation K466 -0.093 1.182 _LAQK(gl)NPMYQK_
SFPQ Ubiquitylation K559 -0.148 0.186 _MEELHNQEMQK(gl)R_
SFPQ Phosphorylation T687 -1.833 _GMGPGT(ph)PAGYGR_
TJP1 Ubiquitylation K54 0.081 -0.398 _GSLLPLK(gl)R_
TJP1 Ubiquitylation K157 0.023 -0.755 _SEK(gl)IWPR_
TJP1 Phosphorylation S175 0.113 -0.041 _S(ph)VASSQPAKPTK_
TJP1 Ubiquitylation K187 -0.394 _SVASSQPAK(gl)PTK_
TJP1 Ubiquitylation K198 0.760 0.143 _SRK(gl)NEEYGLR_
TJP1 Phosphorylation S329 -0.569 -0.354 _HS(ph)PQQPSNGSLR_
TJP1 Phosphorylation S353 -0.522 -0.375 _ISKPGAVS(ph)TPVK_
TJP1 Phosphorylation S617 0.438 0.543 _S(ph)REDLSAQPVQTK_
TJP1 Ubiquitylation K677 -0.484 _EEPDIYQIAK(gl)SEPR_
TJP1 Phosphorylation S912 -0.113 _IDS(ph)PGFKPASQQK_
TJP1 Phosphorylation S916 -0.049 0.102 _IDS(ph)PGFKPASQQVYR_
TJP1 Ubiquitylation K920 7.379 6.153 _IDSPGFK(gl)PASQQVYR_
TJP1 Phosphorylation S968 -0.778 _LEEPTPAPSTSYS(ph)PQADSLR_
TJP1 Phosphorylation S1579 0.045 -0.197 _SHS(ph)LAQPPEFDSGVETFSIHAEKPK_
TJP1 Phosphorylation S1617 0.665 _AIPVS(ph)PSAVEEDEDEDGHTVVATAR_
U2AF1 Ubiquitylation K15 0.020 _DK(gl)VNCSFYFK_
U2AF2 Phosphorylation S2 0.658 0.706 _(ac)S(ph)DFDEFER_
U2AF2 Ubiquitylation K70 0.614 _GAK(gl)EEHGGLIR_
U2AF2 Phosphorylation S79 -0.077 0.135 _GAKEEHGGLIRS(ph)PR_
U2AF2 Ubiquitylation K462 0.048 _VVVTK(gl)YCDPDSYHR_


© Copyright Svejstrup Laboratory 2015