RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
RPA1	6	0.500	0.350	3.133	3.046	0.303	1.770	2.112
RPA3	3	-0.760	1.900				1.805
GTF2H1	3	-0.470	0.340	0.260	2.656	2.859	1.092	0.966
RPA2	3	-1.830	3.700				1.524
RPA2	3	-1.830	3.700	2.592
XPC	3	-0.140	0.000				2.695	0.925
DDB1	3	-1.620	2.560	0.925	1.008	1.640	0.761	0.768
ERCC2	2	-0.590	1.060	-0.491		1.066
DDB2	2	0.570	-0.690		-1.550	1.027
GTF2H2	2	0.890	-0.020	0.105	2.323	2.292	1.092	0.150
GTF2H2C	2			0.105	2.323	2.292	1.092	0.150
ERCC3	2	-1.110	1.490		2.619	2.418		0.499
ERCC1	1	-1.720	3.820
ERCC1	1	-1.460	2.450
ERCC5	1	-2.410	5.420
GTF2H4	1	-1.010	2.070		1.371	2.504
MNAT1	0	-0.030	-0.100			0.666
GTF2H3	0	-0.020	0.680				1.408	0.908
RAD23B	0	-1.130	1.860				1.418	-1.362
CCNH	0	1.480	-0.550
ERCC4	0							1.257

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CCNH	Ubiquitylation	K189	0.418		_K(gl)TADDFLNR_
DDB1	Ubiquitylation	K150	-0.646		_VIPLDRDNK(gl)ELK_
DDB1	Ubiquitylation	K191		0.416	_HVK(gl)TYEVSLR_
DDB1	Ubiquitylation	K204	1.756		_EFNK(gl)GPWK_
DDB1	Ubiquitylation	K383	0.577	0.094	_QGQGQLVTCSGAFK(gl)EGSLR_
DDB1	Ubiquitylation	K484	-0.381		_LVSQEPK(gl)ALVSEWKEPQAK_
DDB1	Ubiquitylation	K857	0.452	-0.214	_IVVFQYSDGK(gl)LQTVAEK_
DDB1	Ubiquitylation	K1121	-0.339	1.343	_M(ox)QEVVANLQYDDGSGM(ox)K(gl)R_
DDB2	Phosphorylation	S24	-1.622	-0.259	_S(ph)RSPLELEPEAK_
DDB2	Phosphorylation	S26	-1.330	-0.351	_S(ph)PLELEPEAK_
DDB2	Ubiquitylation	K151	0.781		_DKPTFIK(gl)GIGAGGSITGLK_
DDB2	Ubiquitylation	K187	1.683	3.110	_LQDFK(gl)GNILR_
DDB2	Ubiquitylation	K309		1.567	_LLTTDQK(gl)SEIR_
DDB2	Ubiquitylation	K362	3.835	2.315	_YPDPNFK(gl)SCTPYELR_
ERCC1	Ubiquitylation	K162	-0.634		_LQSLGK(gl)NFALR_
ERCC1	Ubiquitylation	K243		-0.245	_VTECLTTVK(gl)SVNK_
ERCC1	Ubiquitylation	K281		-1.586	_EDLALCPGLGPQK(gl)AR_
ERCC2	Ubiquitylation	K268	5.973	1.957	_CQGNLETLQK(gl)TVLR_
ERCC2	Ubiquitylation	K507		-2.034	_GNDQVAISSK(gl)FETR_
ERCC5	Phosphorylation	S766	-0.289	-0.748	_LKTEKEPDATPPS(ph)PR_
ERCC5	Phosphorylation	S809	-0.115	0.693	_NAPAAVDEGSIS(ph)PR_
ERCC5	Ubiquitylation	K858	0.818	1.193	_INSSTENSDEGLK(gl)VR_
ERCC5	Phosphorylation	S951	-0.018	-0.048	_ELTPAS(ph)PTCTNSVSK_
ERCC5	Phosphorylation	S988	0.598	1.186	_FDSSLLSS(ph)DDETK_
GTF2H1	Ubiquitylation	K240	2.338		_LNTGSK(gl)DLFAECAK_
GTF2H2	Ubiquitylation	K42	-0.223		_ATIEDILFKAK(gl)_
GTF2H2	Ubiquitylation	K77		-1.015	_TMEDQDLK(gl)PNR_
GTF2H2	Ubiquitylation	K116		-1.309	_RAEK(gl)LTELSGNPR_
GTF2H2C	Ubiquitylation	K42	-0.223		_ATIEDILFKAK(gl)_
GTF2H2C	Ubiquitylation	K77		-1.015	_TMEDQDLK(gl)PNR_
GTF2H2C	Ubiquitylation	K116		-1.309	_RAEK(gl)LTELSGNPR_
GTF2H3	Ubiquitylation	K28		-0.741	_QALK(gl)ESQFTLSK_
GTF2H3	Ubiquitylation	K74		-0.538	_FLYPGK(gl)NGR_
GTF2H3	Ubiquitylation	K125	-0.584	-0.425	_SDIK(gl)GQHTETLLAGSLAK_
GTF2H3	Ubiquitylation	K152	-0.594		_MNKEVK(gl)DNQEMK_
GTF2H3	Ubiquitylation	K300		-1.837	_ISLPPVLKAK(gl)_
GTF2H4	Ubiquitylation	K452		-2.338	_LMVVTPAGHSDVK(gl)R_
MNAT1	Phosphorylation	S279	0.003	0.225	_AAS(ph)PQDLAGGYTSSLACHR_
RAD23B	Ubiquitylation	K6	0.859		_MQVTLK(gl)TLQQQTFK_
RAD23B	Ubiquitylation	K14	-0.844	0.214	_TLQQQTFK(gl)IDIDPEETVK_
RAD23B	Ubiquitylation	K24	-0.948	-0.186	_IDIDPEETVK(gl)ALK_
RAD23B	Ubiquitylation	K27	0.109		_ALK(gl)EKIESEK_
RAD23B	Ubiquitylation	K29	0.068		_ALKEK(gl)IESEK_
RAD23B	Ubiquitylation	K34	-0.882		_IESEK(gl)GKDAFPVAGQK_
RAD23B	Ubiquitylation	K36	-0.874	-0.287	_GK(gl)DAFPVAGQK_
RAD23B	Ubiquitylation	K45	-0.399	-0.029	_DAFPVAGQK(gl)LIYAGK_
RAD23B	Ubiquitylation	K51	0.026	0.504	_LIYAGK(gl)ILNDDTALKEYK_
RAD23B	Ubiquitylation	K60	-0.671		_ILNDDTALK(gl)EYK_
RAD23B	Ubiquitylation	K63	0.067	0.874	_EYK(gl)IDEK_
RAD23B	Ubiquitylation	K67	0.305	1.081	_IDEK(gl)NFVVVMVTK_
RAD23B	Ubiquitylation	K76	-0.206		_IDEKNFVVVMVTK(gl)PK_
RAD23B	Ubiquitylation	K78	0.613	-0.091	_NFVVVMVTKPK(gl)_
RAD23B	Ubiquitylation	K147	-2.198	-1.679	_QEK(gl)PAEKPAETPVATSPTATDSTSGDSSR_
RAD23B	Ubiquitylation	K151	-2.232		_QEKPAEK(gl)PAETPVATSPTATDSTSGDSSR_
RAD23B	Phosphorylation	T159	0.409	-0.043	_QEKPAEKPAETPVAT(ph)SPTATDSTSGDSSR_
RAD23B	Phosphorylation	S160	0.086	-0.061	_QEKPAEKPAETPVATS(ph)PTATDSTSGDSSR_
RPA1	Ubiquitylation	K163	2.827	4.085	_AYGASK(gl)TFGK_
RPA1	Ubiquitylation	K167	3.009	3.243	_TFGK(gl)AAGPSLSHTSGGTQSK_
RPA1	Ubiquitylation	K183	0.925		_AAGPSLSHTSGGTQSK(gl)VVPIASLTPYQSK_
RPA1	Ubiquitylation	K263	-1.803		_GTLK(gl)IANK_
RPA1	Ubiquitylation	K267	2.751		_IANK(gl)QFTAVK_
RPA1	Ubiquitylation	K331	3.112	4.066	_SYEDATK(gl)ITVR_
RPA1	Ubiquitylation	K410	2.458		_SLSVLSSSTIIANPDIPEAYK(gl)LR_
RPA1	Ubiquitylation	K489	0.465	2.335	_K(gl)VIDQQNGLYR_
RPA1	Ubiquitylation	K588	-0.055		_IK(gl)ATVMDVKPVDYR_
RPA1	Ubiquitylation	K595	1.201		_ATVMDVK(gl)PVDYR_
RPA2	Ubiquitylation	K85	0.693		_HAEK(gl)APTNIVYK_
RPA2	Ubiquitylation	K235	1.339		_NQLK(gl)HMSVSSIK_
RPA3	Ubiquitylation	K33	0.794		_LEK(gl)IHPTGK_
RPA3	Ubiquitylation	K39	1.508	1.875	_IHPTGK(gl)MFILSDGEGK_
XPC	Ubiquitylation	K81	1.419	0.366	_VTVK(gl)SENLK_
XPC	Ubiquitylation	K161	1.308		_SLLPVK(gl)PVEIEIETPEQAK_
XPC	Ubiquitylation	K174	2.462		_SLLPVKPVEIEIETPEQAK(gl)TR_
XPC	Ubiquitylation	K364		4.366	_TSK(gl)GTKQEETFAK_
XPC	Ubiquitylation	K367	2.553	2.125	_GTK(gl)QEETFAK_
XPC	Ubiquitylation	K374	6.783		_QEETFAK(gl)GTCRPSAK_
XPC	Ubiquitylation	K508	2.971	0.687	_KDPSLPAASSSSSSSK(gl)R_
XPC	Ubiquitylation	K619	1.753	1.740	_EK(gl)KEDLEFQAK_
XPC	Ubiquitylation	K650	2.788	-0.207	_NHPLYALK(gl)R_
XPC	Ubiquitylation	K708		4.328	_MVK(gl)GFSNR_