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Query: RAD23B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RAD23B 0 4.222 -1.130 1.860 1.418 -1.362

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RAD23B Ubiquitylation K67 0.305 1.081 _IDEK(gl)NFVVVMVTK_
RAD23B Ubiquitylation K63 0.067 0.874 _EYK(gl)IDEK_
RAD23B Ubiquitylation K51 0.026 0.504 _LIYAGK(gl)ILNDDTALKEYK_
RAD23B Ubiquitylation K14 -0.844 0.214 _TLQQQTFK(gl)IDIDPEETVK_
RAD23B Ubiquitylation K45 -0.399 -0.029 _DAFPVAGQK(gl)LIYAGK_
RAD23B Phosphorylation T159 0.409 -0.043 _QEKPAEKPAETPVAT(ph)SPTATDSTSGDSSR_
RAD23B Phosphorylation S160 0.086 -0.061 _QEKPAEKPAETPVATS(ph)PTATDSTSGDSSR_
RAD23B Ubiquitylation K78 0.613 -0.091 _NFVVVMVTKPK(gl)_
RAD23B Ubiquitylation K24 -0.948 -0.186 _IDIDPEETVK(gl)ALK_
RAD23B Ubiquitylation K36 -0.874 -0.287 _GK(gl)DAFPVAGQK_
RAD23B Ubiquitylation K147 -2.198 -1.679 _QEK(gl)PAEKPAETPVATSPTATDSTSGDSSR_
RAD23B Ubiquitylation K6 0.859 _MQVTLK(gl)TLQQQTFK_
RAD23B Ubiquitylation K27 0.109 _ALK(gl)EKIESEK_
RAD23B Ubiquitylation K29 0.068 _ALKEK(gl)IESEK_
RAD23B Ubiquitylation K34 -0.882 _IESEK(gl)GKDAFPVAGQK_
RAD23B Ubiquitylation K60 -0.671 _ILNDDTALK(gl)EYK_
RAD23B Ubiquitylation K76 -0.206 _IDEKNFVVVMVTK(gl)PK_
RAD23B Ubiquitylation K151 -2.232 _QEKPAEK(gl)PAETPVATSPTATDSTSGDSSR_

Background Information for RAD23B:


Pubmed-RAD23B »
Uniprot-RAD23B »
Biogrid-RAD23B »
ProteomicsDB-RAD23B »

Tumorportal-RAD23B »
COSMIC-RAD23B »
GenomeRNAi-RAD23B »
Genecards-RAD23B


Protein-protein Interactions for RAD23B
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait KCTD3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RAD23B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait UBL7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RAD23B
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Rad60/SUMO_like IPR022617 1.93
Category members Ubiquitin-rel_dom IPR029071 1.79
Category members Ubiquitin-like IPR000626 1.61
Category members STI1_HS-bd IPR006636 0.44
Category members XPC-bd IPR015360 0.35
Category members UBA/Ts_N IPR000449 0.34
Category members Rad23 IPR004806 0.28
Category members UBA-like IPR009060 0.17
Category members UBA/transl_elong_EF1B_N_euk IPR015940 0.04


Protein complexes (CORUM database) featuring RAD23B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RAD23B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members GO Category GO:0006281 DNA repair Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members Pathway Pathway_338 REACTOME_DNA_REPAIR 0 8.18
Category members GO Category GO:0006289 nucleotide-excision repair Database 6.65
Category members Pathway Pathway_342 REACTOME_NUCLEOTIDE_EXCISION_REPAIR 0 5.83
Category members Pathway Pathway_339 KEGG_NUCLEOTIDE_EXCISION_REPAIR 0 4.91
Category members GO Category GO:0003684 damaged DNA binding Database 4.54
Category members Pathway Pathway_857 REACTOME_FORMATION_OF_INCISION_COMPLEX_IN_GG_NER 0 4.24
Category members GO Category GO:0003697 single-stranded DNA binding Database 4.24
Category members GO Category GO:0000718 nucleotide-excision repair, DNA damage removal Database 3.83
Category members GO Category GO:0006974 cellular response to DNA damage stimulus Database 3.57
Category members Pathway Pathway_344 REACTOME_GLOBAL_GENOMIC_NER_GG_NER 0 3.29
Category members GO Category GO:0000502 proteasome complex Database 3.17
Category members GO Category GO:0031593 polyubiquitin binding Database 0.38
Category members GO Category GO:0000715 nucleotide-excision repair, DNA damage recognition Database 0.29
Category members GO Category GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process Database 0.23
Category members GO Category GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process Database 0.13
Category members GO Category GO:0007283 spermatogenesis Database 0


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