bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Category

Results for the Category
polyubiquitin binding
(GO:0031593)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

 Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
RAD18 2 0.290 -0.170
RAD18 2 0.290 -0.170 0.133 -0.034 0.651
RAD18 2 0.290 -0.170 -0.119
VCP 2 1.650 -0.640 -0.182 0.578 -0.596 0.007 -0.036
ZFAND6 0 -0.730 -0.160
RAD23B 0 -1.130 1.860 1.418 -1.362
AGAP3 0 0.590 -0.720
BRE 0 -1.690 2.290 0.053 0.191 -0.048 0.149
BRE 0 -1.690 2.290 -1.215
UBQLN4 0 -0.930 0.810 0.070 0.121 -0.680 0.697
UBQLN4 0 0.690 -0.780 0.070 0.121 -0.680 0.697
UBXN1 0 0.810 -0.820 -0.696
AGL 0 0.770 -1.020 0.022 -1.155
FAM175A 0 -1.160 1.510
FAM175B 0 0.620 -0.580
SPATA5L1 0 0.670 -0.420 -0.864 -0.304
RAD23A 0 -0.070 0.060
RAD23A 0 -0.070 0.060
SHARPIN 0 1.240 -0.570
DZIP3 0 0.260 -0.800

PTM Sites:

 Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
AGAP3 Phosphorylation T442 -3.655 _ATPATAPGT(ph)SPR_
AGAP3 Phosphorylation S443 -3.655 _ATPATAPGT(ph)SPR_
AGAP3 Phosphorylation S538 -0.914 -1.112 _LDPPPS(ph)PHSNR_
BRE Ubiquitylation K26 -0.928 _NGK(gl)VGLDATNCLR_
BRE Ubiquitylation K41 -0.768 -0.586 _ITDLK(gl)SGCTSLTPGPNCDR_
BRE Ubiquitylation K162 0.838 _K(gl)NNWTGEFSAR_
DZIP3 Ubiquitylation K830 0.518 _EQLSMK(gl)R_
DZIP3 Ubiquitylation K1042 -1.173 _LK(gl)TAFPQQTR_
FAM175A Ubiquitylation K368 -0.236 _LLDTQDK(gl)R_
FAM175A Ubiquitylation K398 -1.202 _MK(gl)GFGEYSR_
FAM175A Phosphorylation S406 0.645 0.695 _GFGEYSRS(ph)PTF_
FAM175B Ubiquitylation K114 0.352 _EQVLHK(gl)QLTR_
FAM175B Ubiquitylation K187 -0.204 _VSSVPNTSQSYAK(gl)VIK_
FAM175B Ubiquitylation K229 0.227 0.727 _VQAVCADVEK(gl)SER_
FAM175B Ubiquitylation K243 -0.600 _VVESCQAEVNK(gl)LR_
RAD18 Ubiquitylation K13 0.971 -0.795 _TVTITK(gl)EDESTEK_
RAD18 Ubiquitylation K73 -1.744 _TQCPTCCVTVTEPDLK(gl)NNR_
RAD18 Phosphorylation S99 -0.633 0.106 _NHLLQFALES(ph)PAK_
RAD18 Phosphorylation S103 1.453 1.119 _NHLLQFALESPAKS(ph)PASSSSK_
RAD18 Ubiquitylation K110 -0.405 -0.669 _SPASSSSK(gl)NLAVK_
RAD18 Ubiquitylation K110 -0.405 -0.669 _SPASSSSK(gl)NLAVK_
RAD18 Ubiquitylation K115 -0.231 -0.368 _NLAVK(gl)VYTPVASR_
RAD18 Ubiquitylation K151 0.809 0.351 _EMSGSTSELLIK(gl)ENK_
RAD18 Ubiquitylation K154 0.097 0.713 _EMSGSTSELLIKENK(gl)SK_
RAD18 Ubiquitylation K156 0.757 0.161 _SK(gl)FSPQK_
RAD18 Ubiquitylation K161 -0.335 -0.403 _FSPQK(gl)EASPAAK_
RAD18 Ubiquitylation K186 -1.903 -2.009 _SVEEIAPDPSEAK(gl)RPEPPSTSTLK_
RAD18 Ubiquitylation K197 -1.182 _RPEPPSTSTLK(gl)QVTK_
RAD18 Ubiquitylation K258 -0.742 _TVYNLLSDRDLKK(gl)_
RAD18 Ubiquitylation K261 0.601 0.053 _LK(gl)EHGLSIQGNK_
RAD18 Ubiquitylation K309 0.251 _SAAEIVQEIENIEK(gl)TR_
RAD18 Ubiquitylation K318 1.786 _LEASK(gl)LNESVMVFTK_
RAD18 Ubiquitylation K333 0.989 1.516 _DQTEK(gl)EIDEIHSK_
RAD18 Ubiquitylation K370 -0.695 _IAGMSQK(gl)TVTITK_
RAD18 Ubiquitylation K376 0.971 -0.795 _TVTITK(gl)EDESTEK_
RAD18 Phosphorylation S471 0.270 0.272 _NDLQDTEIS(ph)PR_
RAD23A Ubiquitylation K33 -0.058 0.710 _TLQQQTFK(gl)IR_
RAD23A Ubiquitylation K43 -0.655 0.490 _IRMEPDETVK(gl)VLK_
RAD23A Ubiquitylation K48 -0.793 -0.524 _VLKEK(gl)IEAEK_
RAD23A Ubiquitylation K53 -1.008 _IEAEK(gl)GRDAFPVAGQK_
RAD23A Ubiquitylation K64 -0.788 -0.325 _GRDAFPVAGQK(gl)LIYAGK_
RAD23A Ubiquitylation K70 -0.718 0.049 _LIYAGK(gl)ILSDDVPIRDYR_
RAD23A Ubiquitylation K86 0.305 1.081 _IDEK(gl)NFVVVMVTK_
RAD23A Ubiquitylation K97 0.761 0.681 _NFVVVMVTKTK(gl)_
RAD23A Phosphorylation S125 -0.022 0.064 _EDKSPS(ph)EESAPTTSPESVSGSVPSSGSSGR_
RAD23A Phosphorylation S128 0.031 _EDKSPSEES(ph)APTTSPESVSGSVPSSGSSGR_
RAD23A Phosphorylation S133 0.164 0.423 _EDKSPSEESAPTTS(ph)PESVSGSVPSSGSSGR_
RAD23A Phosphorylation S219 -1.735 _AVEYLLTGIPGSPEPEHGSVQESQVS(ph)EQPATEAAGENPLEFLR_
RAD23B Ubiquitylation K6 0.859 _MQVTLK(gl)TLQQQTFK_
RAD23B Ubiquitylation K14 -0.844 0.214 _TLQQQTFK(gl)IDIDPEETVK_
RAD23B Ubiquitylation K24 -0.948 -0.186 _IDIDPEETVK(gl)ALK_
RAD23B Ubiquitylation K27 0.109 _ALK(gl)EKIESEK_
RAD23B Ubiquitylation K29 0.068 _ALKEK(gl)IESEK_
RAD23B Ubiquitylation K34 -0.882 _IESEK(gl)GKDAFPVAGQK_
RAD23B Ubiquitylation K36 -0.874 -0.287 _GK(gl)DAFPVAGQK_
RAD23B Ubiquitylation K45 -0.399 -0.029 _DAFPVAGQK(gl)LIYAGK_
RAD23B Ubiquitylation K51 0.026 0.504 _LIYAGK(gl)ILNDDTALKEYK_
RAD23B Ubiquitylation K60 -0.671 _ILNDDTALK(gl)EYK_
RAD23B Ubiquitylation K63 0.067 0.874 _EYK(gl)IDEK_
RAD23B Ubiquitylation K67 0.305 1.081 _IDEK(gl)NFVVVMVTK_
RAD23B Ubiquitylation K76 -0.206 _IDEKNFVVVMVTK(gl)PK_
RAD23B Ubiquitylation K78 0.613 -0.091 _NFVVVMVTKPK(gl)_
RAD23B Ubiquitylation K147 -2.198 -1.679 _QEK(gl)PAEKPAETPVATSPTATDSTSGDSSR_
RAD23B Ubiquitylation K151 -2.232 _QEKPAEK(gl)PAETPVATSPTATDSTSGDSSR_
RAD23B Phosphorylation T159 0.409 -0.043 _QEKPAEKPAETPVAT(ph)SPTATDSTSGDSSR_
RAD23B Phosphorylation S160 0.086 -0.061 _QEKPAEKPAETPVATS(ph)PTATDSTSGDSSR_
SHARPIN Phosphorylation S129 -0.955 -1.373 _S(ph)NSPPALGPEACPVSLPSPPEASTLK_
SHARPIN Phosphorylation S131 -0.955 -1.242 _S(ph)NSPPALGPEACPVSLPSPPEASTLK_
SHARPIN Ubiquitylation K189 0.043 0.785 _AIAGGDEK(gl)GAAQVAAVLAQHR_
SHARPIN Ubiquitylation K318 -2.283 -2.114 _EAPATGPSPQHPQK(gl)MDGELGR_
SPATA5L1 Ubiquitylation K372 -1.127 _EVVIGTPTLK(gl)QR_
SPATA5L1 Ubiquitylation K477 -1.832 _LK(gl)QSIEWPLK_
SPATA5L1 Ubiquitylation K511 -0.655 _GVLLYGPPGCAK(gl)TTLVR_
SPATA5L1 Ubiquitylation K577 -0.866 _SASK(gl)TGCDVQER_
SPATA5L1 Ubiquitylation K663 -0.274 _LSILK(gl)VCTK_
UBQLN4 Ubiquitylation K35 -0.248 0.186 _ASVK(gl)EFKEEISR_
UBXN1 Ubiquitylation K83 -1.791 _EPTSSEQGGLEGSGSAAGEGK(gl)PALSEEER_
UBXN1 Ubiquitylation K96 -1.483 _EPTSSEQGGLEGSGSAAGEGKPALSEEERQEQTK(gl)R_
UBXN1 Ubiquitylation K105 0.343 0.709 _RM(ox)LELVAQK(gl)QR_
UBXN1 Ubiquitylation K154 1.029 0.790 _EK(gl)AEELAAR_
UBXN1 Ubiquitylation K178 -4.185 _K(gl)YGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR_
UBXN1 Phosphorylation S200 -1.255 -2.127 _KYGGSVGSQPPPVAPEPGPVPSS(ph)PSQEPPTKR_
VCP Phosphorylation S3 0.795 1.142 _(ac)AS(ph)GADSKGDDLSTAILK_
VCP Phosphorylation S7 0.312 0.941 _(ac)ASGADS(ph)KGDDLSTAILK_
VCP Ubiquitylation K8 -0.439 -0.154 _(ac)ASGADSK(gl)GDDLSTAILK_
VCP Ubiquitylation K18 -0.452 0.181 _GDDLSTAILK(gl)QK_
VCP Ubiquitylation K20 -0.512 0.529 _(ac)ASGADSKGDDLSTAILKQK(gl)_
VCP Ubiquitylation K60 0.678 0.493 _GDTVLLK(gl)GKK_
VCP Ubiquitylation K81 0.084 _EAVCIVLSDDTCSDEK(gl)IR_
VCP Ubiquitylation K109 -0.847 -0.260 _LGDVISIQPCPDVK(gl)YGK(gl)R_
VCP Ubiquitylation K112 -0.736 -0.276 _LGDVISIQPCPDVK(gl)YGK(gl)R_
VCP Ubiquitylation K148 -0.262 -0.087 _K(gl)GDIFLVR_
VCP Ubiquitylation K211 1.383 0.902 _K(gl)QLAQIK_
VCP Ubiquitylation K236 -0.526 -0.178 _AIGVK(gl)PPR_
VCP Ubiquitylation K251 -0.110 _GILLYGPPGTGK(gl)TLIAR_
VCP Ubiquitylation K336 0.522 _IVSQLLTLMDGLK(gl)QR_
VCP Ubiquitylation K386 1.339 0.706 _LEILQIHTK(gl)NM(ox)K_
VCP Ubiquitylation K389 0.568 1.195 _LEILQIHTKNMK(gl)_
VCP Ubiquitylation K505 0.377 0.794 _FLK(gl)FGMTPSK_
VCP Ubiquitylation K524 -0.528 _GVLFYGPPGCGK(gl)TLLAK_
VCP Ubiquitylation K529 -0.250 _GVLFYGPPGCGKTLLAK(gl)_
VCP Ubiquitylation K565 0.645 0.689 _EIFDK(gl)AR_
VCP Ubiquitylation K615 1.209 1.270 _VINQILTEMDGMSTKK(gl)_
VCP Ubiquitylation K651 -1.709 -0.719 _LDQLIYIPLPDEK(gl)SR_
VCP Ubiquitylation K658 0.362 0.711 _VAILK(gl)ANLR_
VCP Ubiquitylation K663 -0.839 _K(gl)SPVAKDVDLEFLAK_
VCP Ubiquitylation K668 -0.536 0.265 _SPVAK(gl)DVDLEFLAK_
VCP Ubiquitylation K696 1.574 1.691 _ACK(gl)LAIR_
VCP Ubiquitylation K754 0.510 0.939 _K(gl)YEMFAQTLQQSR_
ZFAND6 Ubiquitylation K192 -0.133 _ADAAEK(gl)IRK_
ZFAND6 Ubiquitylation K195 -0.376 -0.731 _IRK(gl)ENPVVVGEK_


.

© Copyright Svejstrup Laboratory 2015