bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: RAD23A

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RAD23A 0 2.861 -0.070 0.060

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RAD23A Ubiquitylation K86 0.305 1.081 _IDEK(gl)NFVVVMVTK_
RAD23A Ubiquitylation K33 -0.058 0.710 _TLQQQTFK(gl)IR_
RAD23A Ubiquitylation K97 0.761 0.681 _NFVVVMVTKTK(gl)_
RAD23A Ubiquitylation K43 -0.655 0.490 _IRMEPDETVK(gl)VLK_
RAD23A Phosphorylation S133 0.164 0.423 _EDKSPSEESAPTTS(ph)PESVSGSVPSSGSSGR_
RAD23A Phosphorylation S128 0.536 0.193 _EDKSPSEES(ph)APATSPESVSGSVPSSGSSGR_
RAD23A Phosphorylation S125 -0.022 0.064 _EDKSPS(ph)EESAPTTSPESVSGSVPSSGSSGR_
RAD23A Ubiquitylation K70 -0.718 0.049 _LIYAGK(gl)ILSDDVPIRDYR_
RAD23A Phosphorylation S128 0.031 _EDKSPSEES(ph)APTTSPESVSGSVPSSGSSGR_
RAD23A Ubiquitylation K64 -0.788 -0.325 _GRDAFPVAGQK(gl)LIYAGK_
RAD23A Ubiquitylation K48 -0.793 -0.524 _VLKEK(gl)IEAEK_
RAD23A Phosphorylation S219 -1.735 _AVEYLLTGIPGSPEPEHGSVQESQVS(ph)EQPATEAAGENPLEFLR_
RAD23A Ubiquitylation K53 -1.008 _IEAEK(gl)GRDAFPVAGQK_
RAD23A Phosphorylation S123 0.216 _EDKS(ph)PSEESAPATSPESVSGSVPSSGSSGR_
RAD23A Phosphorylation S125 0.283 _EDKSPS(ph)EESAPATSPESVSGSVPSSGSSGR_
RAD23A Phosphorylation S216 -1.562 _AVEYLLTGIPGSPEPEHGSVQES(ph)QVSEQPATEAGENPLEFLR_

Background Information for RAD23A:


Pubmed-RAD23A »
Uniprot-RAD23A »
Biogrid-RAD23A »
ProteomicsDB-RAD23A »

Tumorportal-RAD23A »
COSMIC-RAD23A »
GenomeRNAi-RAD23A »
Genecards-RAD23A


Protein-protein Interactions for RAD23A
Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in RAD23A
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Rad60/SUMO_like IPR022617 1.93
Category members Ubiquitin-rel_dom IPR029071 1.79
Category members Ubiquitin-like IPR000626 1.61
Category members STI1_HS-bd IPR006636 0.44
Category members XPC-bd IPR015360 0.35
Category members UBA/Ts_N IPR000449 0.34
Category members Rad23 IPR004806 0.28
Category members UBA-like IPR009060 0.17
Category members UBA/transl_elong_EF1B_N_euk IPR015940 0.04


Protein complexes (CORUM database) featuring RAD23A
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RAD23A
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0019048 modulation by virus of host morphology or physiology Database 7.81
Category members GO Category GO:0006289 nucleotide-excision repair Database 6.65
Category members Pathway Pathway_339 KEGG_NUCLEOTIDE_EXCISION_REPAIR 0 4.91
Category members GO Category GO:0003684 damaged DNA binding Database 4.54
Category members GO Category GO:0003697 single-stranded DNA binding Database 4.24
Category members GO Category GO:0006974 cellular response to DNA damage stimulus Database 3.57
Category members GO Category GO:0000502 proteasome complex Database 3.17
Category members GO Category GO:0031593 polyubiquitin binding Database 0.38
Category members GO Category GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process Database 0.23
Category members GO Category GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process Database 0.13
Category members GO Category GO:0045070 positive regulation of viral genome replication Database 0.04


.

© Copyright Svejstrup Laboratory 2015