RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
CDC34	1	-0.790	0.600
UBE2M	1	2.990	-1.120	-0.569			0.612	0.392
AKTIP	1	-1.660	2.970
UBE2G2	1	2.190	-0.930
UBE2T	0	0.090	0.230
UBE2K	0	-0.480	0.600
UBE2I	0	-0.320	0.480	-0.694			-0.283	0.274
UBE2R2	0	-0.300	0.560
UBE2S	0	0.660	-0.630				-0.879	-0.110
UBE2D3	0	-1.120	1.910		-0.582	-0.725	-0.315
BIRC6	0	-0.150	-0.410	-0.224
TMEM189-UB	0
TMEM189-UB	0
UBE2D2	0	-0.010	1.100		-0.582	-0.725	-0.315
UBE2D2	0	-0.010	1.100
UBE2G1	0	0.040	-0.350
UBE2Z	0	-0.540	0.380
UBE2J2	0	0.210	-0.200
UBE2Q1	0	0.070	-0.340
UBE2V2	0	-0.070	0.120
UBE2E3	0	-0.960	1.320				-0.786	-0.414
UBE2E3	0	0.340	-0.680				-0.786	-0.414
UBE2E3	0	-0.960	1.320	-0.980
UBE2E3	0	0.340	-0.680	-0.980
UBE2E1	0	1.580	-0.610				-0.786	-0.414
UBE2C	0	-0.130	-0.650
UBE2O	0	-0.370	-0.040
UBE2E2	0	-0.360	0.100				-0.786	-0.414
UBE2E2	0	-0.330	0.540				-0.786	-0.414
UBE2E2	0	-0.360	0.100
UBE2E2	0	-0.330	0.540
UBE2L3	0	-0.730	0.630				1.031	0.887
UBE2L3	0	-0.730	0.630
UBE2J1	0						-1.180	-0.378
UBE2V1	0	-0.460	-0.280
UBE2V1	0	0.870	-1.000
UBE2V1	0	-0.460	-0.280
UBE2V1	0	0.870	-1.000
UBE2V1	0	-0.460	-0.280
UBE2V1	0	0.870	-1.000

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AKTIP	Phosphorylation	T29	0.157		_TLTGDVKT(ph)SPPR_
AKTIP	Phosphorylation	S30	0.157	0.228	_TLTGDVKTS(ph)PPR_
BIRC6	Ubiquitylation	K1643	0.456	1.279	_QQQLLK(gl)LQQQK_
BIRC6	Ubiquitylation	K2258	0.781	0.364	_ALVEQMEK(gl)EK_
BIRC6	Ubiquitylation	K2260	1.136	0.364	_ALVEQMEKEK(gl)_
BIRC6	Ubiquitylation	K2265	1.175		_IQSNK(gl)GSSYKLLVEQAK_
BIRC6	Ubiquitylation	K2270	0.915	1.024	_GSSYK(gl)LLVEQAK_
BIRC6	Ubiquitylation	K2277	0.786		_LLVEQAK(gl)LK_
BIRC6	Ubiquitylation	K2279		-0.121	_LLVEQAKLK(gl)_
BIRC6	Ubiquitylation	K3146	0.462	-0.459	_AVDSTLK(gl)TR_
BIRC6	Ubiquitylation	K4020	-0.186		_VITDPSLSK(gl)TDSYKR_
CDC34	Ubiquitylation	K157	1.502		_GK(gl)DREYTDIIR_
TMEM189-UBE2V1	Ubiquitylation	K42	-0.791	0.215	_ELAALYSPGK(gl)R_
TMEM189-UBE2V1	Ubiquitylation	K129	0.440	0.709	_LMMSK(gl)ENMK_
TMEM189-UBE2V1	Ubiquitylation	K291	-0.071	0.214	_IYSLK(gl)IECGPK_
UBE2C	Phosphorylation	S3	-0.676	1.443	_(ac)AS(ph)QNRDPAATSVAAAR_
UBE2C	Phosphorylation	T11		1.337	_(ac)ASQNRDPAAT(ph)SVAAAR_
UBE2C	Ubiquitylation	K121	-0.180		_EK(gl)WSALYDVR_
UBE2D2	Ubiquitylation	K8	0.326		_INK(gl)ELSDLAR_
UBE2D2	Ubiquitylation	K8	0.526		_IHK(gl)ELNDLAR_
UBE2D2	Ubiquitylation	K101	-0.229		_SQWSPALTISK(gl)_
UBE2D2	Ubiquitylation	K128	0.754		_IYK(gl)TDRDK(gl)YNR_
UBE2D2	Ubiquitylation	K128	0.918		_IYK(gl)TDREK_
UBE2D2	Ubiquitylation	K133	0.005		_IYK(gl)TDRDK(gl)YNR_
UBE2D2	Ubiquitylation	K144	0.212	0.074	_EWTQK(gl)YAM_
UBE2D3	Ubiquitylation	K8	0.326		_INK(gl)ELSDLAR_
UBE2D3	Ubiquitylation	K101	-0.229		_SQWSPALTISK(gl)_
UBE2D3	Ubiquitylation	K128	0.754		_IYK(gl)TDRDK(gl)YNR_
UBE2D3	Ubiquitylation	K133	0.005		_IYK(gl)TDRDK(gl)YNR_
UBE2D3	Ubiquitylation	K144	0.212	0.074	_EWTQK(gl)YAM_
UBE2E1	Ubiquitylation	K43	0.668	0.523	_NSK(gl)LLSTSAK_
UBE2E1	Ubiquitylation	K50	0.531		_LLSTSAK(gl)R_
UBE2E1	Ubiquitylation	K54	-1.325		_IQK(gl)ELADITLDPPPNCSAGPK_
UBE2E2	Phosphorylation	S11	0.162	-0.072	_VDDS(ph)PSTSGGSSDGDQR_
UBE2E2	Phosphorylation	S19	0.195		_VDDSPSTSGGSS(ph)DGDQR_
UBE2E2	Ubiquitylation	K43	0.668	0.523	_NSK(gl)LLSTSAK_
UBE2E2	Ubiquitylation	K50	0.531		_LLSTSAK(gl)R_
UBE2E2	Ubiquitylation	K54	-1.325		_IQK(gl)ELADITLDPPPNCSAGPK_
UBE2E3	Ubiquitylation	K43	0.668	0.523	_NSK(gl)LLSTSAK_
UBE2E3	Ubiquitylation	K50	0.531		_LLSTSAK(gl)R_
UBE2E3	Ubiquitylation	K54	-1.325		_IQK(gl)ELADITLDPPPNCSAGPK_
UBE2E3	Ubiquitylation	K58	0.426		_TTAK(gl)LSTSAK_
UBE2G1	Ubiquitylation	K163	0.087		_K(gl)SQETAFE_
UBE2G2	Ubiquitylation	K7	-0.135	-1.265	_MAGTALK(gl)R_
UBE2G2	Ubiquitylation	K153	-0.284	0.230	_DDREQFYK(gl)IAK_
UBE2G2	Ubiquitylation	K156	-0.110	-0.573	_IAK(gl)QIVQK_
UBE2G2	Ubiquitylation	K161	-0.157	-1.390	_QIVQK(gl)SLGL_
UBE2I	Ubiquitylation	K49	0.535		_K(gl)GTPWEGGLFK_
UBE2I	Ubiquitylation	K59	0.481		_GTPWEGGLFK(gl)LR_
UBE2J1	Ubiquitylation	K177	0.456		_SGSDSSQADQEAK(gl)ELAR_
UBE2J1	Phosphorylation	S266	0.243	0.208	_RLS(ph)TSPDVIQGHQPR_
UBE2J2	Ubiquitylation	K18	-0.473	0.051	_LK(gl)QDYLR_
UBE2J2	Ubiquitylation	K155		-0.195	_GPTLGSIETSDFTK(gl)R_
UBE2K	Ubiquitylation	K14	0.555		_EFK(gl)EVLKSEETSK_
UBE2K	Ubiquitylation	K72	-0.864		_IPETYPFNPPK(gl)VR_
UBE2K	Ubiquitylation	K142	-0.490	0.206	_QNPEMFK(gl)QTAR_
UBE2K	Phosphorylation	S158		-0.740	_LWAHVYAGAPVS(ph)SPEYTK_
UBE2K	Ubiquitylation	K164	-0.343		_LWAHVYAGAPVSSPEYTK(gl)K_
UBE2K	Ubiquitylation	K165	0.840	0.850	_K(gl)IENLCAMGFDR_
UBE2L3	Ubiquitylation	K9	1.366		_LMK(gl)ELEEIRK_
UBE2L3	Ubiquitylation	K20	1.131	0.956	_CGMK(gl)NFR_
UBE2L3	Ubiquitylation	K64	-1.229		_IEINFPAEYPFK(gl)PPK_
UBE2L3	Ubiquitylation	K73	0.293	0.015	_TK(gl)IYHPNIDEK_
UBE2L3	Ubiquitylation	K96	-0.965		_GQVCLPVISAENWK(gl)PATK_
UBE2L3	Ubiquitylation	K131	0.407	0.848	_ADLAEEYSK(gl)DR_
UBE2L3	Ubiquitylation	K138	0.523		_FCK(gl)NAEEFTK_
UBE2L3	Ubiquitylation	K146	0.357	0.853	_NAEEFTKK(gl)_
UBE2L3	Ubiquitylation	K150	0.275		_YGEK(gl)RPVD_
UBE2L3	Ubiquitylation	K235	0.591	0.087	_TVDTK(gl)QAQDLAR_
UBE2L3	Ubiquitylation	K254	-0.450	-0.156	_SYGIPFIETSAK(gl)TR_
UBE2M	Ubiquitylation	K3	0.667	0.186	_(ac)MIK(gl)LFSLK_
UBE2M	Ubiquitylation	K8	0.340	0.758	_LFSLK(gl)QQK_
UBE2M	Ubiquitylation	K26	0.352		_K(gl)ASAAQLR_
UBE2M	Ubiquitylation	K72	0.129	0.036	_LVICPDEGFYK(gl)SGK_
UBE2M	Ubiquitylation	K94	-0.409	-0.910	_VGQGYPHDPPKVK(gl)_
UBE2O	Ubiquitylation	K132	0.916		_VQWYPEGVK(gl)QHVK_
UBE2O	Ubiquitylation	K373	-0.160		_IAWECPEK(gl)NCAQGEGSMAK_
UBE2O	Phosphorylation	S401	-0.086	0.001	_IMSCS(ph)PDTQCSR_
UBE2O	Ubiquitylation	K524	-0.115		_SIPLSIKNLK(gl)_
UBE2O	Ubiquitylation	K672	-1.366		_IGNTEDGAPHK(gl)EDEPSVGQVAR_
UBE2O	Ubiquitylation	K809	-0.128		_DGPPK(gl)SFR_
UBE2O	Ubiquitylation	K815	1.051	1.313	_ELK(gl)EAIK_
UBE2O	Phosphorylation	S836	-1.051	-2.096	_NM(ox)TVEQLLTGS(ph)PTSPTVEPEKPTR_
UBE2O	Phosphorylation	S839	0.693	0.156	_NMTVEQLLTGSPTS(ph)PTVEPEKPTR_
UBE2O	Ubiquitylation	K865	0.875	1.470	_LQENLK(gl)K_
UBE2O	Phosphorylation	S896	-0.467	0.090	_KEDKPEGQS(ph)PVK_
UBE2O	Ubiquitylation	K1267	0.196		_GFIK(gl)SIR_
UBE2Q1	Ubiquitylation	K403	1.136		_AQQSYK(gl)SLVQIHEK_
UBE2R2	Ubiquitylation	K157	0.378		_GK(gl)DKEYAEIIR_
UBE2R2	Ubiquitylation	K182	-1.038		_AEAEKDGVK(gl)VPTTLAEYCIK_
UBE2S	Ubiquitylation	K198	-1.509	-1.940	_ALASGTEASSTDPGAPGGPGGAEGPMAKK(gl)_
UBE2T	Ubiquitylation	K91	-0.306	0.175	_ICLDVLK(gl)LPPK_
UBE2T	Ubiquitylation	K141	-0.260		_YNKPAFLK(gl)NAR_
UBE2T	Ubiquitylation	K192		-0.193	_ASQLVGIEKK(gl)_
UBE2V1	Ubiquitylation	K10	0.254	-0.318	_(ac)AATTGSGVK(gl)VPR_
UBE2V1	Ubiquitylation	K129	0.440	0.709	_LMMSK(gl)ENMK_
UBE2V1	Ubiquitylation	K291	-0.071	0.214	_IYSLK(gl)IECGPK_
UBE2V2	Ubiquitylation	K8	-0.337	-0.243	_(ac)AVSTGVK(gl)VPR_
UBE2V2	Ubiquitylation	K66	-0.608		_IYSLK(gl)VECGPK_
UBE2V2	Ubiquitylation	K72	-0.575	-0.545	_VECGPK(gl)YPEAPPSVR_
UBE2V2	Ubiquitylation	K129	0.440	0.709	_LMMSK(gl)ENMK_
UBE2Z	Ubiquitylation	K260	-0.656	-0.829	_VAVCDMMEGK(gl)CPCPEPLR_