bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: UBE2J1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
UBE2J1 0 -0.651 -1.180 -0.378

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
UBE2J1 Phosphorylation S266 0.243 0.208 _RLS(ph)TSPDVIQGHQPR_
UBE2J1 Ubiquitylation K177 0.456 _SGSDSSQADQEAK(gl)ELAR_

Background Information for UBE2J1:


Pubmed-UBE2J1 »
Uniprot-UBE2J1 »
Biogrid-UBE2J1 »
ProteomicsDB-UBE2J1 »

Tumorportal-UBE2J1 »
COSMIC-UBE2J1 »
GenomeRNAi-UBE2J1 »
Genecards-UBE2J1


Protein-protein Interactions for UBE2J1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ST3GAL1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait UBE2J1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in UBE2J1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members UBQ-conjugat_E2 IPR000608 0
Category members UBQ-conjugating_enzyme/RWD IPR016135 0


Protein complexes (CORUM database) featuring UBE2J1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring UBE2J1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members Pathway Pathway_621 REACTOME_ADAPTIVE_IMMUNE_SYSTEM 0 4.72
Category members Pathway Pathway_458 REACTOME_IMMUNE_SYSTEM 0 3
Category members Pathway Pathway_764 REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION 0 2.56
Category members Pathway Pathway_888 KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS 0 2.22
Category members Pathway Pathway_832 REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION 0 1.58
Category members GO Category GO:0005789 endoplasmic reticulum membrane Database 1.57
Category members GO Category GO:0030433 ER-associated ubiquitin-dependent protein catabolic process Database 0.33
Category members GO Category GO:0004842 ubiquitin-protein ligase activity Database 0.24
Category members Pathway Pathway_31 KEGG_PARKINSONS_DISEASE 0 0
Category members GO Category GO:0016881 acid-amino acid ligase activity Database 0
Category members GO Category GO:0018279 protein N-linked glycosylation via asparagine Database 0


.

© Copyright Svejstrup Laboratory 2015