RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
BRCA1	2	0.200	-0.140	0.433			0.018	0.146
FERMT2	1	0.290	-0.340	1.597
LAMB1	1	-0.210	0.090				-0.236	-0.180
FZD7	1	2.260	-1.160
ILK	1	-1.560	3.680				-0.463	-0.527
PEAK1	1	-0.110	0.550
VAMP3	0	-0.800	0.690				0.418
VAMP3	0	-0.800	0.690
TYRO3	0	0.220	-0.340
RTCB	0	-0.340	-0.280	-0.127	-0.216	0.247	0.093	0.212
LAMA5	0	-1.280	1.860	1.257			0.402	0.337
LAMC1	0	0.650	-1.240				-0.164	0.459
RAC1	0	-0.580	1.580	0.486			-0.364	-0.568
FER	0	0.540	-0.510		0.407
MERTK	0	-0.060	0.240
ANTXR1	0	0.970	-0.800
EPHB3	0	0.800	-0.380					0.221
EPHB3	0	0.800	-0.380
PARVA	0	-0.710	1.020

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ANTXR1	Ubiquitylation	K401	-0.267		_WGEK(gl)GSTEEGAKLEK_
ANTXR1	Ubiquitylation	K409	0.240	1.491	_GSTEEGAK(gl)LEK_
ANTXR1	Ubiquitylation	K412	0.106	0.222	_GSTEEGAKLEK(gl)AK_
ANTXR1	Ubiquitylation	K419	-0.951		_VK(gl)MPEQEYEFPEPR_
BRCA1	Phosphorylation	S123	0.465	0.445	_KENNSPEHLKDEVS(ph)IIQSM(ox)GYR_
BRCA1	Phosphorylation	S753	2.662	4.077	_VSNNAEDPKDLMLS(ph)GER_
BRCA1	Phosphorylation	S1009	0.733	1.028	_KNLLEENFEEHSM(ox)S(ph)PER_
BRCA1	Phosphorylation	S1546	1.821	2.105	_NYPS(ph)QEELIK_
BRCA1	Phosphorylation	S1564		3.065	_VVDVEEQQLEES(ph)GPHDLTETSYLPR_
BRCA1	Phosphorylation	S1664		1.120	_EKPELTAS(ph)TER_
EPHB3	Ubiquitylation	K578	-0.752	-0.618	_QSPEDVYFSK(gl)SEQLKPLK_
EPHB3	Ubiquitylation	K583	0.445	0.124	_SEQLK(gl)PLK_
EPHB3	Ubiquitylation	K617	0.339		_QK(gl)VIGAGEFGEVYK_
EPHB3	Ubiquitylation	K649	-1.219		_TLK(gl)AGYTEK_
EPHB3	Phosphorylation	S897		0.000	_LPS(ph)TSGSEGVPFR_
EPHB3	Phosphorylation	T898	-0.329	0.424	_LPST(ph)SGSEGVPFR_
EPHB3	Ubiquitylation	K960	0.133		_IGVTLAGHQKK(gl)_
FERMT2	Phosphorylation	S159	-0.331	-0.390	_KLDDQS(ph)EDEALELEGPLITPGSGSIYSSPGLYSK_
FZD7	Ubiquitylation	K569	0.551	0.319	_LSHSSK(gl)GETAV_
ILK	Ubiquitylation	K85		-0.777	_DIVQK(gl)LLQYK_
ILK	Ubiquitylation	K426		-0.300	_LMK(gl)ICMNEDPAK_
ILK	Ubiquitylation	K435		-2.732	_ICMNEDPAK(gl)RPK_
LAMA5	Ubiquitylation	K255		1.313	_EFTK(gl)ATNVR_
LAMB1	Ubiquitylation	K182		2.294	_SSDFGK(gl)TWGVYR_
LAMB1	Ubiquitylation	K207		1.047	_YFAYDCEASFPGISTGPMK(gl)K_
LAMB1	Ubiquitylation	K208		1.047	_YFAYDCEASFPGISTGPMK(gl)K_
LAMB1	Ubiquitylation	K239		-0.148	_ALDPAFK(gl)IEDPYSPR_
LAMB1	Ubiquitylation	K253		0.823	_IQNLLK(gl)ITNLR_
LAMB1	Ubiquitylation	K772		2.879	_SVVK(gl)TPMTDVCR_
LAMC1	Ubiquitylation	K564		0.404	_YFIAPAK(gl)FLGK_
MERTK	Ubiquitylation	K856	0.219		_LQLEK(gl)LLESLPDVR_
PARVA	Phosphorylation	T3	-0.031	0.005	_(ac)AT(ph)SPQKS(ph)PSVPK_
PARVA	Phosphorylation	S4	-0.031	0.005	_(ac)ATS(ph)PQKS(ph)PSVPK_
PARVA	Phosphorylation	S8	-0.343	-0.395	_(ac)AT(ph)SPQKS(ph)PSVPK_
PARVA	Phosphorylation	S10	-1.421	-1.107	_SPS(ph)VPKSPTPK_
PARVA	Phosphorylation	S14	-0.492	-0.182	_SPSVPKS(ph)PTPK_
PARVA	Phosphorylation	T16		-0.703	_SPT(ph)PKSPPSR_
PARVA	Phosphorylation	S19	-0.513	-0.721	_SPTPKS(ph)PPSR_
PEAK1	Phosphorylation	S281	0.153		_ANTLS(ph)PVR_
PEAK1	Phosphorylation	S568		0.247	_S(ph)APTS(ph)PTATNISSK_
PEAK1	Phosphorylation	S572		0.247	_S(ph)APTS(ph)PTATNISSK_
PEAK1	Phosphorylation	S823	-0.236		_SLFTS(ph)QPSGEAEAPQTTDSPTTK_
PEAK1	Phosphorylation	S826	-0.505	-0.656	_SLFTSQPS(ph)GEAEAPQTTDSPTTK_
PEAK1	Phosphorylation	S1036		5.225	_SHSS(ph)PSQIPK_
RAC1	Ubiquitylation	K115	-1.745	-0.215	_AK(gl)WYPEVR_
RAC1	Ubiquitylation	K142	0.492		_LDLRDDK(gl)DTIEK_
RAC1	Ubiquitylation	K152	0.099	-0.292	_K(gl)LTPITYPQGLAMAK_
RAC1	Ubiquitylation	K166	-0.981	-0.655	_LTPITYPQGLAMAK(gl)EIGAVK_
RAC1	Ubiquitylation	K172	1.026	0.412	_EIGAVK(gl)YLECSALTQR_
RAC1	Ubiquitylation	K185	-0.113	0.578	_GLK(gl)TVFDEAIR_
RAC1	Ubiquitylation	K202	-1.379	-1.447	_AVLCPPPVK(gl)KR_
RAC1	Ubiquitylation	K203	-1.708	-1.447	_AVLCPPPVKK(gl)_
RTCB	Ubiquitylation	K206		-0.057	_MLQADPNK(gl)VSAR_
RTCB	Ubiquitylation	K366	0.974	0.041	_VEQHVVDGK(gl)ER_
RTCB	Ubiquitylation	K493	0.471	0.657	_NVTDVVNTCHDAGISKK(gl)_
TYRO3	Phosphorylation	S930	0.766	-0.051	_YILTPGGLAEQPGQAEHQPES(ph)PLNETQR_
VAMP3	Phosphorylation	T9	0.318	-0.040	_(ac)STGPTAAT(ph)GSNR_
VAMP3	Phosphorylation	S11	0.474	0.952	_(ac)STGPTAATGS(ph)NR_
VAMP3	Ubiquitylation	K54	0.408	0.792	_VNVDK(gl)VLER_
VAMP3	Phosphorylation	S58	-0.407	0.612	_ADALQAGAS(ph)QFETSAAK_
VAMP3	Ubiquitylation	K61	0.558	0.387	_VLERDQK(gl)LSELDDR_
VAMP3	Phosphorylation	S63		0.374	_ADALQAGASQFETS(ph)AAK_