RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
DLG1	1	0.400	-0.220	1.552			0.102	0.488
CHCHD3	1	-0.340	0.430				0.065	0.055
CHCHD3	1	-0.340	0.430
ARRB2	1	2.000	-1.160	-0.340	0.096	0.051		-1.604
LAMTOR1	1	0.700	-0.850	0.343			0.382
AKAP13	1	-0.260	0.000
GNB2L1	1	1.000	-0.100		0.279	1.704
GNB2L1	1	1.000	-0.100	-0.278	-0.107	-0.424
PKP2	0	0.120	0.970				0.814	0.742
PKP2	0	0.120	0.970
SMARCD1	0	-0.920	1.120
SMARCD1	0	-0.920	1.120	0.284	0.336	0.686	0.169	0.388
TELO2	0	-0.970	1.960	-0.671			-0.644	-0.259
CAV1	0	1.150	-0.150
CAV1	0	1.150	-0.150
CAV1	0	1.150	-0.150
EIF3B	0			1.370	-0.495	-0.796	0.313	0.383
SLC9A3R1	0	0.240	-0.810
LAMTOR3	0	0.150	0.120				-0.396	0.095
MAP2K2	0	-0.610	0.080
MAP2K2	0	-0.610	0.080
ISCU	0
MPP7	0	0.640	-0.320				1.118	0.576
HOMER1	0	0.820	-0.260	0.261
SEPT2	0	-0.720	1.100				0.500	-0.778
LAMTOR4	0	-0.850	2.120
LAMTOR4	0	-0.650	1.640
ITSN1	0	-0.670	0.610
ITSN1	0	-0.670	0.610				0.287	0.672

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AKAP13	Phosphorylation	S1407		0.033	_ENWCTIEPCPDAASLLAS(ph)KQSPECENFLDVGLGR_
AKAP13	Phosphorylation	S1645	0.260	0.639	_VDS(ph)LVSLSEEDLESDQR_
AKAP13	Phosphorylation	S1650	1.957	1.098	_VDSLVSLS(ph)EEDLESDQR_
AKAP13	Phosphorylation	S1879	-0.267	-0.048	_S(ph)AVLLVDETATTPIFANR_
AKAP13	Phosphorylation	S1932	0.162	0.318	_FLSHS(ph)TDSLNK_
AKAP13	Phosphorylation	S2401		-0.038	_DMAECSTPLPEDCS(ph)PTHSPR_
AKAP13	Phosphorylation	S2564	0.644	0.859	_S(ph)LSRPSSLIEQEK_
AKAP13	Phosphorylation	S2566	0.600	0.289	_SLS(ph)RPSSLIEQEK_
AKAP13	Phosphorylation	S2712		-1.063	_IPSFFPSPEEPPS(ph)PSAPSIAK_
AKAP13	Phosphorylation	S2721	1.298	1.110	_S(ph)GSLDSELSVSPK_
AKAP13	Phosphorylation	S2731	-0.105	0.196	_SGSLDSELSVS(ph)PK_
ARRB2	Ubiquitylation	K199	-1.933		_VQFAPEK(gl)PGPQPSAETTR_
CAV1	Ubiquitylation	K5	0.591	0.963	_(ac)SGGK(gl)YVDSEGHLYTVPIR_
CAV1	Phosphorylation	S6	0.836	0.688	_(ac)ADELS(ph)EKQVYDAHTK_
CAV1	Ubiquitylation	K8	0.244	0.734	_(ac)ADELSEK(gl)QVYDAHTK_
CAV1	Ubiquitylation	K26	0.724	0.894	_EQGNIYK(gl)PNNK_
CAV1	Ubiquitylation	K30	-0.008	0.317	_EQGNIYKPNNK(gl)AMADELSEK_
CAV1	Ubiquitylation	K39	0.690	1.170	_AMADELSEK(gl)QVYDAHTK_
CAV1	Phosphorylation	S76	0.607	0.527	_AMADELS(ph)EK_
CAV1	Ubiquitylation	K176		-0.259	_INLQK(gl)EI_
CHCHD3	Phosphorylation	S46		1.606	_S(ph)QRYSGAYGASVSDEELKR_
CHCHD3	Phosphorylation	S50	0.558	0.865	_YS(ph)GAYGASVSDEELK_
CHCHD3	Ubiquitylation	K170	-0.125	0.892	_VTTEQYQK(gl)AAEEVEAK_
DLG1	Phosphorylation	S102	-1.455		_SKPSEPIQPVNTWEISSLPSSTVTSETLPSSLS(ph)PSVEK_
DLG1	Phosphorylation	T115	-0.707	-1.378	_YQDEDT(ph)PPQEHISPQITNEVIGPELVHVSEK_
DLG1	Phosphorylation	S122		-1.073	_YQDEDTPPQEHIS(ph)PQITNEVIGPELVHVSEK_
DLG1	Phosphorylation	S158		0.773	_NLSEIENVHGFVSHSHIS(ph)PIK_
DLG1	Ubiquitylation	K321	1.264	1.435	_IMEIK(gl)LIK_
DLG1	Ubiquitylation	K361	0.180		_IIEGGAAHK(gl)DGK_
DLG1	Ubiquitylation	K452	-0.704		_YSPVSK(gl)AVLGDDEITREPR_
DLG1	Ubiquitylation	K556	0.105		_FEAK(gl)IHDLR_
DLG1	Phosphorylation	S573	0.697		_EQM(ox)M(ox)NSSISSGS(ph)GSLR_
DLG1	Phosphorylation	S575	0.255	0.729	_EQMMNSSISSGSGS(ph)LR_
DLG1	Ubiquitylation	K843	1.259		_SMENIMEMNK(gl)R_
EIF3B	Phosphorylation	S85	-3.958		_TEPAAEAEAASGPSESPS(ph)PPAAEELPGSHAEPPVPAQGEAPGEQAR_
EIF3B	Phosphorylation	S117	0.195	0.691	_S(ph)DSRAQAVSEDAGGNEGR_
EIF3B	Phosphorylation	S119	0.751	0.135	_SDS(ph)RAQAVSEDAGGNEGR_
EIF3B	Ubiquitylation	K209	1.149		_LKNVIHK(gl)_
EIF3B	Ubiquitylation	K213	0.753	0.706	_IFSK(gl)FGK_
EIF3B	Ubiquitylation	K228		-0.141	_ITNDFYPEEDGK(gl)TK_
EIF3B	Ubiquitylation	K230	-0.197	-0.141	_ITNDFYPEEDGKTK(gl)_
EIF3B	Ubiquitylation	K254	0.780	0.552	_NADGYK(gl)LDKQHTFR_
EIF3B	Ubiquitylation	K257	0.112		_LDK(gl)QHTFR_
EIF3B	Ubiquitylation	K288	-0.482		_QPFK(gl)DLGNLR_
EIF3B	Ubiquitylation	K324	-0.666	-0.221	_TSIFWNDVK(gl)DPVSIEER_
EIF3B	Ubiquitylation	K364	-0.136	0.294	_GIALWGGEK(gl)FK_
EIF3B	Ubiquitylation	K463		-0.222	_SLK(gl)ISGIK_
EIF3B	Ubiquitylation	K529	0.371		_NGDYLCVK(gl)VDR_
EIF3B	Ubiquitylation	K535	-0.160	-0.820	_TPK(gl)GTQGVVTNFEIFR_
EIF3B	Ubiquitylation	K552	-0.586		_EK(gl)QVPVDVVEMK_
EIF3B	Ubiquitylation	K729	-0.119		_YSK(gl)IFEQK_
EIF3B	Ubiquitylation	K734	0.515		_IFEQK(gl)DR_
EIF3B	Ubiquitylation	K744		-0.170	_ASK(gl)ELVER_
EIF3B	Ubiquitylation	K762	-0.137		_K(gl)MAQELYMEQK_
EIF3B	Ubiquitylation	K772	0.011		_MAQELYMEQK(gl)NER_
GNB2L1	Ubiquitylation	K38	-0.238	0.350	_DK(gl)TIIMWK_
GNB2L1	Ubiquitylation	K106	-0.290		_RFVGHTK(gl)DVLSVAFSSDNR_
GNB2L1	Ubiquitylation	K130		0.632	_TIK(gl)LWNTLGVCK_
GNB2L1	Ubiquitylation	K175	-0.554	-0.015	_LVK(gl)VWNLANCK_
GNB2L1	Ubiquitylation	K183	-0.161	-0.282	_VWNLANCK(gl)_
GNB2L1	Ubiquitylation	K185	-0.061	-0.249	_VWNLANCKLK(gl)_
GNB2L1	Ubiquitylation	K257		-0.288	_YWLCAATGPSIK(gl)_
GNB2L1	Ubiquitylation	K271	0.756	-0.007	_IIVDELK(gl)QEVISTSSK_
ISCU	Ubiquitylation	K54	0.775		_NVGSLDK(gl)TSK_
ISCU	Ubiquitylation	K57	0.775		_NVGSLDK(gl)TSK_
ITSN1	Phosphorylation	S203	-0.497	-0.811	_AQS(ph)FDVASVPPVAEWAVPQSSR_
ITSN1	Phosphorylation	S313	0.882	0.188	_S(ph)GSGISVISSTSVDQR_
ITSN1	Phosphorylation	S315	0.675	0.750	_SGS(ph)GISVISSTSVDQR_
ITSN1	Ubiquitylation	K569		0.570	_DSLVTLK(gl)R_
ITSN1	Ubiquitylation	K583		0.151	_NMQFSNTPDSGVSLLHK(gl)K_
ITSN1	Ubiquitylation	K584		-0.412	_NMQFSNTPDSGVSLLHKK(gl)_
ITSN1	Ubiquitylation	K596	1.277		_LK(gl)EQLDALEK_
ITSN1	Phosphorylation	S889	-0.357	-0.319	_TVSPGSVS(ph)PIHGQGQVVENLK_
ITSN1	Phosphorylation	S904	-0.681	-0.729	_SAFTPATATGSSPS(ph)PVLGQGEK_
ITSN1	Phosphorylation	S978	1.075	0.684	_STS(ph)MDSGSSESPASLK_
LAMTOR1	Ubiquitylation	K20	-0.365	-0.474	_K(gl)LLLDPSSPPTK_
LAMTOR1	Phosphorylation	S27	-0.440	-0.557	_KLLLDPSS(ph)PPTK_
LAMTOR1	Ubiquitylation	K31	-1.467		_KLLLDPSSPPTK(gl)ALNGAEPNYHSLPSAR_
LAMTOR4	Ubiquitylation	K64	0.203	0.287	_GMNVPFK(gl)R_
MAP2K2	Phosphorylation	S23	0.873	0.258	_RKPVLPALTINPTIAEGPS(ph)PTSEGASEANLVDLQK_
MAP2K2	Phosphorylation	T25		0.439	_RKPVLPALTINPTIAEGPSPT(ph)SEGASEANLVDLQK_
MAP2K2	Ubiquitylation	K192	-0.205	-0.241	_DVK(gl)PSNILVNSR_
MAP2K2	Phosphorylation	S293		-0.361	_ELEAIFGRPVVDGEEGEPHS(ph)ISPR_
MAP2K2	Phosphorylation	S295	-0.234	0.026	_ELEAIFGRPVVDGEEGEPHSIS(ph)PR_
MAP2K2	Phosphorylation	T394	0.570	0.158	_LNQPGT(ph)PTR_
PKP2	Phosphorylation	S82	0.172	0.473	_TSS(ph)VPEYVYNLHLVENDFVGGR_
PKP2	Ubiquitylation	K134	0.755	-0.110	_GTAQYSSQK(gl)SVEER_
PKP2	Phosphorylation	S135	0.873	0.521	_GTAQYSSQKS(ph)VEER_
PKP2	Phosphorylation	S151	0.440	0.323	_RLEIS(ph)PDSSPER_
PKP2	Phosphorylation	S154	0.267	0.205	_LEISPDS(ph)SPER_
PKP2	Phosphorylation	S155	-0.249	0.172	_RLEISPDSS(ph)PER_
PKP2	Phosphorylation	S329	0.351	0.264	_AHLTVGQAAAGGS(ph)GNLLTER_
PKP2	Ubiquitylation	K643	1.209	0.678	_NIQTDNNK(gl)SIGCFGSR_
SEPT2	Ubiquitylation	K74	-2.504	-0.241	_VIPGAAEK(gl)IER_
SEPT2	Ubiquitylation	K190	-0.563	-0.040	_ADTLTLK(gl)ER_
SEPT2	Phosphorylation	S218	0.274	0.283	_IYHLPDAES(ph)DEDEDFKEQTR_
SEPT2	Ubiquitylation	K249	-0.586	0.854	_ASIPFSVVGSNQLIEAK(gl)GK_
SEPT2	Ubiquitylation	K251		0.572	_ASIPFSVVGSNQLIEAKGK(gl)_
SEPT2	Ubiquitylation	K310	-1.570		_K(gl)VENEDMNK(gl)DQILLEK_
SEPT2	Ubiquitylation	K318	-1.909		_K(gl)VENEDMNK(gl)DQILLEK_
SLC9A3R1	Ubiquitylation	K50	-1.732		_LVEPGSPAEK(gl)AGLLAGDR_
SLC9A3R1	Ubiquitylation	K101	-2.049		_LLVVDPETDEQLQK(gl)LGVQVR_
SLC9A3R1	Phosphorylation	S280	-0.611	-0.277	_EALAEAALES(ph)PRPALVR_
SLC9A3R1	Phosphorylation	S290	-0.404	-0.401	_SAS(ph)SDTSEELNSQDSPPK_
SMARCD1	Ubiquitylation	K156		-0.309	_K(gl)LDQTIMR_
SMARCD1	Ubiquitylation	K182		-1.309	_SALSK(gl)YDATK_
SMARCD1	Ubiquitylation	K223	0.456	0.835	_LLEDSALSK(gl)YDATK_
SMARCD1	Ubiquitylation	K273		-1.081	_TATTQETDGFQVK(gl)RPGDVNVR_
SMARCD1	Ubiquitylation	K464	-0.278	-0.878	_DLK(gl)TMTDVVGNPEEERR_
SMARCD1	Ubiquitylation	K498		-0.671	_YFYSK(gl)VQQR_
TELO2	Ubiquitylation	K291		-0.932	_LLGNLVVK(gl)NK_
TELO2	Ubiquitylation	K293		-1.334	_LLGNLVVKNK(gl)_
TELO2	Ubiquitylation	K392		-0.874	_DSRDELLASMMAGVK(gl)CR_
TELO2	Ubiquitylation	K510	-0.286	-1.980	_SSK(gl)APAYVR_