RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PDS5A	1	0.590	-0.570	-0.833	0.206	0.212	0.449	0.249
ATR	1	-1.040	0.920	0.671			1.041	0.708
WAPAL	0	-0.050	1.110	-0.551	0.359	0.266	-0.378	0.010
CDC6	0	-1.190	2.070
TGFB1	0	-0.550	1.050
GTPBP4	0	-1.150	1.590		-0.623	-0.725
GTPBP4	0	-1.150	1.590				-0.486	0.142
GMNN	0	0.620	-1.000
TGFB3	0	0.900	-0.540
TTF1	0						-0.858	-0.752
CDAN1	0
TP53	0	-1.070	1.050	-2.808	0.076	-0.094	0.436	0.497
TERF1	0	-1.080	1.620
S100A11	0	-0.480	0.500					-3.500
S100A11	0	-0.480	0.500
INPPL1	0	1.690	-0.810
NF2	0	-1.080	1.470				0.218	-0.073
NF2	0	-1.080	1.470

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ATR	Ubiquitylation	K32		-0.929	_ELGSATPEEYNTVVQK(gl)PR_
ATR	Phosphorylation	S435	0.516	0.284	_RLS(ph)SSLNPSK_
ATR	Ubiquitylation	K746		-1.823	_NLK(gl)ATSQHECSSSQLK_
ATR	Ubiquitylation	K1019	1.662		_TLGK(gl)QLNVNRR_
ATR	Ubiquitylation	K1600	-0.437		_FQALK(gl)AEK_
ATR	Ubiquitylation	K2106		-0.136	_AYEWEK(gl)AGR_
ATR	Ubiquitylation	K2604	0.657	1.118	_LQGVIK(gl)TR_
CDAN1	Phosphorylation	S285	-0.303	0.017	_TGS(ph)LTDEPADPAR_
CDC6	Ubiquitylation	K33		1.448	_NSSDAK(gl)LEPTNVQTVTCSPR_
CDC6	Phosphorylation	S45		-0.996	_LEPTNVQTVTCS(ph)PR_
CDC6	Phosphorylation	S54		-0.860	_ALPLS(ph)PR_
CDC6	Phosphorylation	S106		-0.049	_LVFDNQLTIKS(ph)PSK_
CDC6	Ubiquitylation	K221		1.075	_ILQDLKK(gl)_
GMNN	Ubiquitylation	K50	-0.622	-0.151	_ENELSAGLSK(gl)R_
GMNN	Phosphorylation	S63	0.028	-0.793	_NDHLTSTTS(ph)SPGVIVPESSENK_
GTPBP4	Ubiquitylation	K187		0.585	_SSFINK(gl)VTR_
INPPL1	Phosphorylation	S1003	-1.290		_NSFNNPAYYVLEGVPHQLLPPEPPS(ph)PAR_
NF2	Phosphorylation	S13	0.833	0.924	_MSFSS(ph)LKR_
NF2	Phosphorylation	S493	1.436	1.115	_RLS(ph)MEIEK_
NF2	Ubiquitylation	K586	0.399	-0.041	_LTLQSAK(gl)SR_
PDS5A	Ubiquitylation	K366	5.856		_DLTEYLK(gl)VR_
PDS5A	Ubiquitylation	K558	1.282	0.231	_AQDFVKK(gl)_
PDS5A	Ubiquitylation	K974	0.230	0.773	_QCLLK(gl)NISIR_
PDS5A	Phosphorylation	S1305	0.624	0.507	_RAAVGQES(ph)PGGLEAGNAK_
S100A11	Ubiquitylation	K3	-0.520	0.599	_(ac)AK(gl)ISSPTETER_
S100A11	Ubiquitylation	K27	0.659	1.346	_YAGK(gl)DGYNYTLSK_
S100A11	Ubiquitylation	K55	-0.307	1.000	_NQK(gl)DPGVLDR_
TERF1	Phosphorylation	S11	-0.248	-0.254	_(ac)AEDVSSAAPS(ph)PR_
TGFB1	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
TGFB3	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
TP53	Ubiquitylation	K120	-0.188		_LGFLHSGTAK(gl)SVTCTYSPALNK_
TP53	Ubiquitylation	K164	0.157	-1.260	_AMAIYK(gl)QSQHMTEVVR_
TP53	Phosphorylation	S314	-0.695	-1.000	_ALPNNTSS(ph)SPQPK_
TP53	Phosphorylation	S315	-0.762	-0.959	_RALPNNTSSS(ph)PQPK_
TP53	Ubiquitylation	K320	-0.978		_ALPNNTSSSPQPKK(gl)_
TP53	Ubiquitylation	K357	-0.231	-0.823	_ELNEALELKDAQAGK(gl)EPGGSR_
TTF1	Phosphorylation	S65	-0.298	-0.047	_DFQHLISS(ph)PLKK_
TTF1	Phosphorylation	S487	-1.206	-0.120	_YLSADSGDADDS(ph)DADLGSAVK_
TTF1	Ubiquitylation	K765		0.657	_AK(gl)VSLIER_
WAPAL	Phosphorylation	S77		0.020	_VEEESTGDPFGFDS(ph)DDESLPVSSK_
WAPAL	Phosphorylation	S221	-0.285	-0.043	_RPES(ph)PSEISPIK_
WAPAL	Phosphorylation	S223	-0.180	0.118	_RPESPS(ph)EISPIK_
WAPAL	Phosphorylation	S226	-0.473	-0.494	_RPES(ph)PSEIS(ph)PIKGSVR_
WAPAL	Phosphorylation	S380		-0.868	_S(ph)MDEFTASTPADLGEAGR_