bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Category

Results for the Category
RNA polymerase II regulatory region sequence-specific DNA binding
(GO:0000977)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

 Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
ETS2 1 -0.200 -0.330
TFAP2D 0 -0.410 1.030 -2.682 -0.269 -3.231
NME2 0 0.040 0.180 -0.783 0.303 -0.394 -0.805 -0.898
RUNX3 0 -0.550 0.450
MEF2A 0 0.820 -0.530
MEF2A 0 0.820 -0.530
FOSL2 0 0.940 -0.940
MEF2C 0 -0.980 1.550
MEF2C 0 -0.980 1.550
CREB3 0 0.180 -0.820
GATA3 0 0.000 -0.660
MEF2D 0 -0.080 -0.210
MEF2D 0 -0.080 -0.210
MEF2D 0 -0.080 -0.210
KLF12 0 0.920 -1.000
SMARCA4 0 -0.810 1.520 0.629 -0.158 0.141 0.337 0.333
GATA4 0 -0.670 0.350
LEF1 0 -0.710 0.790 -0.741
HAND2 0 0.000 0.600
NFIL3 0 0.140 -0.170 -0.223 -0.003
JUNB 0 0.350 -0.410
NME1 0 0.510 -0.420 0.232 0.470
NME1 0 0.510 -0.420 -0.783 0.303 -0.394 -0.805 -0.898

PTM Sites:

 Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
CREB3 Ubiquitylation K176 -0.114 _TEEQILK(gl)R_
ETS2 Ubiquitylation K144 -0.476 _FGMNGQMLCNLGK(gl)ER_
ETS2 Ubiquitylation K416 7.479 _MNYEK(gl)LSR_
ETS2 Ubiquitylation K427 -0.895 _YYYDK(gl)NIIHK_
FOSL2 Phosphorylation S200 -0.517 _S(ph)PPAPGLQPMR_
GATA3 Phosphorylation S162 -1.195 -0.563 _DVS(ph)PDPSLSTPGSAGSAR_
GATA4 Phosphorylation S109 -0.520 -0.425 _FS(ph)FPGTTGSLAAAAAAAAAR_
GATA4 Phosphorylation S407 -0.185 0.124 _LS(ph)PQGYASPVSQSPQTSSK_
HAND2 Ubiquitylation K183 0.800 1.236 _K(gl)ELNEILK_
JUNB Phosphorylation T255 -0.205 _DAT(ph)PPVS(ph)PINMEDQER_
JUNB Phosphorylation S259 -0.205 _DAT(ph)PPVS(ph)PINMEDQER_
KLF12 Phosphorylation S202 0.961 1.049 _S(ph)PGNVNNTIVVPLLEDGR_
LEF1 Ubiquitylation K88 -0.867 -0.222 _ESLEEAAK(gl)R_
MEF2A Ubiquitylation K23 -0.140 _QVTFTK(gl)R_
MEF2A Phosphorylation S235 0.664 -0.092 _AS(ph)PNLIGATGANSLGK_
MEF2A Phosphorylation T253 -1.271 _VMPT(ph)KSPPPPGGGNLGMNSR_
MEF2A Phosphorylation S255 -1.235 _VMPTKS(ph)PPPPGGGNLGMNSR_
MEF2A Phosphorylation S408 -0.173 -0.049 _SEPIS(ph)PPRDR_
MEF2A Phosphorylation S494 -0.858 -1.232 _GDFHSPIVLGRPPNTEDRES(ph)PSVK_
MEF2C Ubiquitylation K23 -0.140 _QVTFTK(gl)R_
MEF2C Phosphorylation S240 0.008 0.302 _NS(ph)PGLLVSPGNLNK_
MEF2C Phosphorylation S406 0.272 0.338 _SEPVS(ph)PPRDR_
MEF2D Ubiquitylation K23 -0.140 _QVTFTK(gl)R_
MEF2D Phosphorylation S184 -1.118 -1.050 _VIPAKS(ph)PPPPTHSTQLGAPSR_
MEF2D Phosphorylation S185 0.259 -0.467 _LLS(ph)PQQPALQR_
MEF2D Phosphorylation S377 0.418 0.181 _SEPVS(ph)PSRER_
NME1 Ubiquitylation K37 0.192 0.188 _TFIAIK(gl)PDGVQR_
NME1 Ubiquitylation K51 -0.368 0.345 _GLVGEIIK(gl)R_
NME1 Ubiquitylation K56 -0.240 _FEQK(gl)GFR_
NME1 Ubiquitylation K125 -0.693 -0.414 _VMLGETNPADSK(gl)PGTIR_
NME1 Ubiquitylation K264 0.448 0.582 _NIIHGSDSVK(gl)SAEK_
NME2 Ubiquitylation K37 0.192 0.188 _TFIAIK(gl)PDGVQR_
NME2 Ubiquitylation K51 -0.368 0.345 _GLVGEIIK(gl)R_
NME2 Ubiquitylation K56 -0.240 _FEQK(gl)GFR_
NME2 Ubiquitylation K125 -0.693 -0.414 _VMLGETNPADSK(gl)PGTIR_
NME2 Ubiquitylation K264 0.448 0.582 _NIIHGSDSVK(gl)SAEK_
RUNX3 Ubiquitylation K244 0.258 _NASAVMK(gl)NQVAR_
SMARCA4 Ubiquitylation K357 -0.934 _ITPIQK(gl)PR_
SMARCA4 Ubiquitylation K405 0.109 1.148 _ATIELK(gl)ALR_
SMARCA4 Ubiquitylation K437 -0.317 _DTALETALNAK(gl)AYKR_
SMARCA4 Ubiquitylation K455 0.225 _ITEK(gl)LEK_
SMARCA4 Ubiquitylation K496 0.923 _SVTGK(gl)IQK_
SMARCA4 Phosphorylation S677 -0.880 -0.324 _KAENAEGQTPAIGPDGEPLDETSQMS(ph)DLPVK_
SMARCA4 Ubiquitylation K1283 0.125 _ILAAAK(gl)YK_
SMARCA4 Phosphorylation S1413 -0.265 0.515 _EVDYSDS(ph)LTEK_
SMARCA4 Phosphorylation S1486 -0.713 -0.935 _LS(ph)PNPPNLTK_


.

© Copyright Svejstrup Laboratory 2015