bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: AP1G1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
AP1G1 0 2.548 -0.070 -0.460 -0.071 0.366 0.385

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
AP1G1 Ubiquitylation K385 1.119 0.748 _DLDVSIK(gl)R_
AP1G1 Ubiquitylation K595 -0.570 -0.014 _AVEYNALFKK(gl)_

Background Information for AP1G1:


Pubmed-AP1G1 »
Uniprot-AP1G1 »
Biogrid-AP1G1 »
ProteomicsDB-AP1G1 »

Tumorportal-AP1G1 »
COSMIC-AP1G1 »
GenomeRNAi-AP1G1 »
Genecards-AP1G1


Protein-protein Interactions for AP1G1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait AP1S2 Cat. description Hein, Mann, Cell 2015
Category members IP bait GTSE1 Cat. description Hein, Mann, Cell 2015
Category members IP bait AAGAB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait AP1M2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait AP1S2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait AP2M1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait POTEB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PPP6R2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in AP1G1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members ARM-type_fold IPR016024 9.26
Category members Clathrin_a/b/g-adaptin_app_Ig IPR008152 0.33
Category members Coatomer/clathrin_app_Ig-like IPR013041 0.18
Category members AP1_complex_gsu IPR017107 0.09
Category members Clathrin_g-adaptin_app IPR008153 0.04
Category members Clathrin/coatomer_adapt-like_N IPR002553 0


Protein complexes (CORUM database) featuring AP1G1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 144 Gamma-BAR-AP1 complex Database 0.03
Category members Corum 36 AP1 adaptor complex Database 0
Category members Corum 5165 AP1G1-PACS1-FURIN complex Database 0


Categories featuring AP1G1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0016032 viral process Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members Pathway Pathway_197 REACTOME_HIV_INFECTION 0 12.07
Category members Pathway Pathway_196 REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS 0 9.67
Category members GO Category GO:0005488 binding Database 9.32
Category members Pathway Pathway_621 REACTOME_ADAPTIVE_IMMUNE_SYSTEM 0 4.72
Category members GO Category GO:0015031 protein transport Database 3.48
Category members Pathway Pathway_458 REACTOME_IMMUNE_SYSTEM 0 3
Category members GO Category GO:0006886 intracellular protein transport Database 2.48
Category members Pathway Pathway_474 REACTOME_MEMBRANE_TRAFFICKING 0 1.14
Category members GO Category GO:0016192 vesicle-mediated transport Database 1.1
Category members Pathway Pathway_195 REACTOME_NEF_MEDIATES_DOWN_MODULATION_OF_CELL_SURFACE_RECEPTORS_BY_RECRUITING_THEM_TO_CLATHRIN_ADAPTERS 0 1.08
Category members Pathway Pathway_475 REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING 0 0.98
Category members Pathway Pathway_194 REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS 0 0.83
Category members GO Category GO:0005765 lysosomal membrane Database 0.82
Category members Pathway Pathway_520 REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS 0 0.78
Category members GO Category GO:0006892 post-Golgi vesicle-mediated transport Database 0.74
Category members GO Category GO:0030659 cytoplasmic vesicle membrane Database 0.62
Category members Pathway Pathway_1265 REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION 0 0.6
Category members GO Category GO:0050690 regulation of defense response to virus by virus Database 0.49
Category members GO Category GO:0048471 perinuclear region of cytoplasm Database 0.39
Category members Pathway Pathway_1266 REACTOME_NEF_MEDIATED_DOWNREGULATION_OF_MHC_CLASS_I_COMPLEX_CELL_SURFACE_EXPRESSION 0 0.36
Category members GO Category GO:0055037 recycling endosome Database 0.29
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0008565 protein transporter activity Database 0.26
Category members GO Category GO:0030665 clathrin-coated vesicle membrane Database 0.24
Category members GO Category GO:0019886 antigen processing and presentation of exogenous peptide antigen via MHC class II Database 0.13
Category members Pathway Pathway_473 REACTOME_LYSOSOME_VESICLE_BIOGENESIS 0 0.13
Category members GO Category GO:0005802 trans-Golgi network Database 0.13
Category members GO Category GO:0030131 clathrin adaptor complex Database 0.11
Category members GO Category GO:0030136 clathrin-coated vesicle Database 0.06
Category members GO Category GO:0032588 trans-Golgi network membrane Database 0.05
Category members GO Category GO:0030119 AP-type membrane coat adaptor complex Database 0.03
Category members GO Category GO:0019894 kinesin binding Database 0.02
Category members Pathway Pathway_74 KEGG_LYSOSOME 0 0
Category members GO Category GO:0000139 Golgi membrane Database 0
Category members GO Category GO:0005215 transporter activity Database 0
Category members GO Category GO:0030117 membrane coat Database 0


.

© Copyright Svejstrup Laboratory 2015