bioLOGIC Category
Results for the Category
REACTOME_NEF_MEDIATES_DOWN_MODULATION_OF_CELL_SURFACE_RECEPTORS_BY_RECRUITING_THEM_TO_CLATHRIN_ADAPTERS
(Pathway_195)
RNAi screen result
|
RNAPII IP (MG132) |
CSB IP |
CSB IP (MG132) |
Chrom. |
Chrom. (MG132) |
Ubi /Phospo |
Ubi /Phospho (MG132) |
W |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Gene name |
MGoogle Score |
RNAi high |
RNAi low |
RNAPII-IP (MG132) |
CSB-IP |
CSB-IP (MG132) |
Chrom. |
Chrom. (MG132) |
ATP6V1H
|
2
|
-1.810
|
2.860
|
|
|
|
0.325
|
|
ATP6V1H
|
2
|
-1.810
|
2.860
|
-0.409
|
|
|
|
|
AP2B1
|
0
|
0.890
|
-0.970
|
|
|
|
|
|
AP2B1
|
0
|
0.890
|
-0.970
|
-0.267
|
0.203
|
0.287
|
0.311
|
0.233
|
AP2S1
|
0
|
-0.210
|
0.500
|
-0.049
|
0.539
|
0.830
|
0.375
|
|
AP1M1
|
0
|
-0.550
|
0.780
|
|
|
|
-0.171
|
-0.095
|
AP1M1
|
0
|
-0.550
|
0.780
|
0.192
|
|
|
|
|
AP1B1
|
0
|
-0.890
|
1.670
|
|
|
|
|
|
AP1B1
|
0
|
-0.890
|
1.670
|
-0.267
|
0.203
|
0.287
|
0.311
|
0.233
|
AP1B1
|
0
|
-0.890
|
1.670
|
|
|
|
-1.575
|
-0.671
|
AP1B1
|
0
|
-0.890
|
1.670
|
0.931
|
0.543
|
0.034
|
0.611
|
0.276
|
ARF1
|
0
|
0.020
|
0.040
|
|
0.702
|
-1.163
|
|
|
AP2M1
|
0
|
-1.250
|
2.200
|
-0.363
|
0.794
|
-0.187
|
0.544
|
0.370
|
AP2M1
|
0
|
-1.250
|
2.200
|
|
|
|
|
|
AP1G1
|
0
|
-0.070
|
-0.460
|
-0.071
|
|
|
0.366
|
0.385
|
PACS1
|
0
|
-1.200
|
1.680
|
|
|
|
|
|
AP1S2
|
0
|
1.190
|
-0.690
|
-1.049
|
|
|
|
|
LCK
|
0
|
-0.490
|
1.390
|
|
|
|
0.295
|
0.576
|
AP2A2
|
0
|
-1.330
|
2.130
|
1.006
|
0.165
|
0.468
|
0.244
|
0.392
|
AP2A1
|
0
|
0.510
|
-1.060
|
0.414
|
0.086
|
0.168
|
-0.002
|
0.179
|
HLA-A
|
0
|
0.790
|
-0.840
|
|
|
|
|
|
Gene name |
PTM type |
PTM site |
UV |
UV (MG132) |
Sequence |
AP1B1
|
Ubiquitylation
|
K5
|
0.232
|
0.554
|
_(ac)TDSK(gl)YFTTTK_
|
AP1B1
|
Ubiquitylation
|
K12
|
0.255
|
|
_K(gl)GEIFELK_
|
AP1B1
|
Ubiquitylation
|
K117
|
-0.547
|
|
_VDK(gl)ITEYLCEPLRK_
|
AP1B1
|
Ubiquitylation
|
K131
|
0.324
|
-0.027
|
_CLK(gl)DEDPYVRK_
|
AP1B1
|
Ubiquitylation
|
K860
|
|
-2.206
|
_LQSSNIFTVAK(gl)R_
|
AP1B1
|
Ubiquitylation
|
K899
|
-0.222
|
-0.751
|
_IQPGNPSCTLSLK(gl)CR_
|
AP1G1
|
Ubiquitylation
|
K385
|
1.119
|
0.748
|
_DLDVSIK(gl)R_
|
AP1G1
|
Ubiquitylation
|
K595
|
-0.570
|
-0.014
|
_AVEYNALFKK(gl)_
|
AP1M1
|
Ubiquitylation
|
K43
|
|
-0.691
|
_(ac)SASAVYVLDLK(gl)GK_
|
AP1M1
|
Ubiquitylation
|
K45
|
|
-0.691
|
_(ac)SASAVYVLDLK(gl)GK_
|
AP1M1
|
Ubiquitylation
|
K272
|
-0.542
|
|
_SK(gl)SVELEDVK_
|
AP1M1
|
Ubiquitylation
|
K280
|
|
-0.292
|
_SVELEDVK(gl)FHQCVR_
|
AP1M1
|
Ubiquitylation
|
K369
|
0.791
|
0.647
|
_FK(gl)TTVGSVK_
|
AP2A1
|
Phosphorylation
|
S655
|
|
-1.574
|
_DPSSNDINGGM(ox)EPTPSTVSTPS(ph)PSADLLGLR_
|
AP2A1
|
Ubiquitylation
|
K880
|
-0.136
|
|
_WK(gl)QLSLPQQEAQK_
|
AP2A2
|
Ubiquitylation
|
K6
|
-0.477
|
0.972
|
_PAVSK(gl)GDGMR_
|
AP2A2
|
Ubiquitylation
|
K616
|
-0.123
|
|
_ESSILAKLK(gl)_
|
AP2A2
|
Ubiquitylation
|
K631
|
-0.267
|
-0.317
|
_KGPSTVTDLEDTK(gl)R_
|
AP2B1
|
Ubiquitylation
|
K5
|
0.145
|
0.310
|
_(ac)TDSK(gl)YFTTNK_
|
AP2B1
|
Ubiquitylation
|
K12
|
0.255
|
|
_K(gl)GEIFELK_
|
AP2B1
|
Ubiquitylation
|
K117
|
-0.547
|
|
_VDK(gl)ITEYLCEPLRK_
|
AP2B1
|
Ubiquitylation
|
K131
|
0.324
|
-0.027
|
_CLK(gl)DEDPYVRK_
|
AP2B1
|
Ubiquitylation
|
K733
|
|
-0.273
|
_AVWLPAVK(gl)AK_
|
AP2B1
|
Ubiquitylation
|
K735
|
-0.839
|
-0.273
|
_AVWLPAVKAK(gl)_
|
AP2M1
|
Ubiquitylation
|
K249
|
0.386
|
0.460
|
_IVIEK(gl)QGK_
|
AP2M1
|
Ubiquitylation
|
K263
|
-0.058
|
-0.236
|
_SGK(gl)QSIAIDDCTFHQCVR_
|
AP2M1
|
Ubiquitylation
|
K281
|
-0.401
|
0.214
|
_LSK(gl)FDSER_
|
AP2M1
|
Ubiquitylation
|
K306
|
-2.014
|
-0.836
|
_TTK(gl)DIILPFR_
|
AP2M1
|
Ubiquitylation
|
K337
|
-1.115
|
|
_SNFK(gl)PSLLAQK_
|
AP2M1
|
Ubiquitylation
|
K364
|
-1.253
|
|
_IPTPLNTSGVQVICMK(gl)GK_
|
AP2S1
|
Ubiquitylation
|
K45
|
-1.058
|
-0.297
|
_DAK(gl)HTNFVEFR_
|
AP2S1
|
Ubiquitylation
|
K130
|
-1.793
|
0.099
|
_ETSQTK(gl)VLK_
|
ATP6V1H
|
Ubiquitylation
|
K176
|
1.541
|
0.958
|
_TQLSSQK(gl)LR_
|
HLA-A
|
Ubiquitylation
|
K92
|
|
-0.349
|
_NVK(gl)AQSQTDRVDLGTLR_
|
HLA-A
|
Ubiquitylation
|
K168
|
|
0.549
|
_SWTAADMAAQITK(gl)R_
|
HLA-A
|
Ubiquitylation
|
K346
|
-0.072
|
-0.211
|
_K(gl)GGSYTQAASSDSAQGSDVSLTACK(gl)V_
|
HLA-A
|
Ubiquitylation
|
K370
|
0.345
|
0.434
|
_K(gl)GGSYTQAASSDSAQGSDVSLTACK(gl)V_
|
LCK
|
Phosphorylation
|
T37
|
|
-0.435
|
_YRPENTPEPVSTSVSHYGAEPT(ph)TVSPCPSSSAK_
|
LCK
|
Ubiquitylation
|
K191
|
-0.112
|
0.264
|
_ESETTK(gl)GAYSLSIR_
|
LCK
|
Ubiquitylation
|
K235
|
0.323
|
|
_AQFDTLQK(gl)LVK_
|
LCK
|
Ubiquitylation
|
K259
|
|
-1.613
|
_LTTVCPTVK(gl)PQTQGLAK_
|
PACS1
|
Phosphorylation
|
T429
|
|
1.102
|
_DTT(ph)SPMELAALEK_
|
PACS1
|
Phosphorylation
|
S430
|
|
1.190
|
_DTTS(ph)PMELAALEK_
|
PACS1
|
Phosphorylation
|
S493
|
|
0.618
|
_TDLQGS(ph)ASPSKVEGVHTPR_
|
PACS1
|
Phosphorylation
|
S495
|
-0.220
|
|
_TDLQGSAS(ph)PSKVEGVHTPR_
|
© Copyright Svejstrup Laboratory 2015