Results for the Category
REACTOME_NEF_MEDIATED_DOWNREGULATION_OF_MHC_CLASS_I_COMPLEX_CELL_SURFACE_EXPRESSION
(Pathway_1266)
RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
W | |||||||
Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
---|---|---|---|---|---|---|---|---|
AP1M1 | 0 | -0.550 | 0.780 | -0.171 | -0.095 | |||
AP1M1 | 0 | -0.550 | 0.780 | 0.192 | ||||
AP1B1 | 0 | -0.890 | 1.670 | |||||
AP1B1 | 0 | -0.890 | 1.670 | -0.267 | 0.203 | 0.287 | 0.311 | 0.233 |
AP1B1 | 0 | -0.890 | 1.670 | -1.575 | -0.671 | |||
AP1B1 | 0 | -0.890 | 1.670 | 0.931 | 0.543 | 0.034 | 0.611 | 0.276 |
AP1G1 | 0 | -0.070 | -0.460 | -0.071 | 0.366 | 0.385 | ||
PACS1 | 0 | -1.200 | 1.680 | |||||
AP1S2 | 0 | 1.190 | -0.690 | -1.049 | ||||
HLA-A | 0 | 0.790 | -0.840 |
Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
---|---|---|---|---|---|
AP1B1 | Ubiquitylation | K5 | 0.232 | 0.554 | _(ac)TDSK(gl)YFTTTK_ |
AP1B1 | Ubiquitylation | K12 | 0.255 | _K(gl)GEIFELK_ | |
AP1B1 | Ubiquitylation | K117 | -0.547 | _VDK(gl)ITEYLCEPLRK_ | |
AP1B1 | Ubiquitylation | K131 | 0.324 | -0.027 | _CLK(gl)DEDPYVRK_ |
AP1B1 | Ubiquitylation | K860 | -2.206 | _LQSSNIFTVAK(gl)R_ | |
AP1B1 | Ubiquitylation | K899 | -0.222 | -0.751 | _IQPGNPSCTLSLK(gl)CR_ |
AP1G1 | Ubiquitylation | K385 | 1.119 | 0.748 | _DLDVSIK(gl)R_ |
AP1G1 | Ubiquitylation | K595 | -0.570 | -0.014 | _AVEYNALFKK(gl)_ |
AP1M1 | Ubiquitylation | K43 | -0.691 | _(ac)SASAVYVLDLK(gl)GK_ | |
AP1M1 | Ubiquitylation | K45 | -0.691 | _(ac)SASAVYVLDLK(gl)GK_ | |
AP1M1 | Ubiquitylation | K272 | -0.542 | _SK(gl)SVELEDVK_ | |
AP1M1 | Ubiquitylation | K280 | -0.292 | _SVELEDVK(gl)FHQCVR_ | |
AP1M1 | Ubiquitylation | K369 | 0.791 | 0.647 | _FK(gl)TTVGSVK_ |
HLA-A | Ubiquitylation | K92 | -0.349 | _NVK(gl)AQSQTDRVDLGTLR_ | |
HLA-A | Ubiquitylation | K168 | 0.549 | _SWTAADMAAQITK(gl)R_ | |
HLA-A | Ubiquitylation | K346 | -0.072 | -0.211 | _K(gl)GGSYTQAASSDSAQGSDVSLTACK(gl)V_ |
HLA-A | Ubiquitylation | K370 | 0.345 | 0.434 | _K(gl)GGSYTQAASSDSAQGSDVSLTACK(gl)V_ |
PACS1 | Phosphorylation | T429 | 1.102 | _DTT(ph)SPMELAALEK_ | |
PACS1 | Phosphorylation | S430 | 1.190 | _DTTS(ph)PMELAALEK_ | |
PACS1 | Phosphorylation | S493 | 0.618 | _TDLQGS(ph)ASPSKVEGVHTPR_ | |
PACS1 | Phosphorylation | S495 | -0.220 | _TDLQGSAS(ph)PSKVEGVHTPR_ |
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