RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
THRAP3	3	1.430	-0.880	0.813	-0.969	0.662	0.407	0.317
TRIP12	2	-1.630	2.710				-0.585	-0.217
TRIP12	2	-1.630	2.710				0.578	0.523
MED24	1	-1.120	1.330	-0.351	-0.190	0.792		-0.333
MED17	1	0.700	-0.990	-1.647		1.651	-0.170	-0.346
HMGN3	1	0.310	-0.590				-1.537	-1.454
MED1	1	0.780	-0.520				-1.530	-0.219
MED4	1	-1.480	2.730
GTF2B	1	0.010	-0.230		-1.841	-0.911
MED30	1	2.100	-1.330
MED16	1	-0.070	-0.120	-0.498	0.991	1.893	-1.924	-1.039
TAF7	1	0.270	-0.210
MED14	1	-0.700	0.420	-2.483	0.951	1.842	-1.302	-0.509
MED13	0	0.640	-0.690
NCOA3	0	0.000	-0.330
NCOR1	0	-0.820	1.130	-0.827			-0.215	0.037
NSD1	0	-0.750	1.060				-0.118	-0.211
JMJD1C	0	-0.430	0.080
MED12	0	-0.180	-0.500				-1.501	-0.491
NCOA6	0	-0.430	0.770				-0.167	0.096
NUP62	0						1.019	0.665

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
GTF2B	Ubiquitylation	K59	0.815		_TFSNDK(gl)ATKDPSR_
GTF2B	Phosphorylation	S70	0.024	1.199	_VGDS(ph)QNPLLSDGDLSTMIGK_
GTF2B	Ubiquitylation	K100	0.563		_GTGAASFDEFGNSK(gl)YQNRR_
GTF2B	Ubiquitylation	K149	0.704		_QVYEQK(gl)SLK_
GTF2B	Ubiquitylation	K178	1.874		_TFK(gl)EICAVSR_
HMGN3	Phosphorylation	T10		-0.157	_RKSPENT(ph)EGK_
HMGN3	Phosphorylation	S31	-1.777	-1.714	_LS(ph)AKPAPPKPEPK_
HMGN3	Ubiquitylation	K33	-1.736		_LSAK(gl)PAPPKPEPKPR_
HMGN3	Phosphorylation	S78	3.475		_EGTAPS(ph)ENGETKAEEAQK_
HMGN3	Phosphorylation	S93	0.325	0.602	_AEEAQKTES(ph)VDNEGE_
JMJD1C	Phosphorylation	S943	-0.429	-0.212	_ITAHSS(ph)PPLTK_
JMJD1C	Phosphorylation	S1185	0.452	0.810	_NDCRS(ph)PTHLTVSSTNTLR_
JMJD1C	Phosphorylation	T1187		0.467	_NDCRS(ph)PTHLTVSSTNTLR_
JMJD1C	Phosphorylation	S2005	-0.899	-1.455	_LTPPES(ph)QSPLHWLADLAEQK_
JMJD1C	Phosphorylation	S2007	-0.154	-0.813	_LTPPESQS(ph)PLHWLADLAEQK_
JMJD1C	Phosphorylation	T2052	-0.154	0.770	_T(ph)SPLVSQNNEQGSTLR_
JMJD1C	Phosphorylation	S2053	0.101	0.770	_T(ph)SPLVSQNNEQGSTLR_
MED1	Phosphorylation	S664		3.368	_DNPAQDFSTLYGSS(ph)PLER_
MED1	Phosphorylation	S771	-1.422		_LSS(ph)SDSIGPDVTDILSDIAEEASKLPSTSDDCPAIGTPLR_
MED1	Phosphorylation	T1051	-1.201	-1.247	_SQT(ph)PPGVATPPIPK_
MED1	Phosphorylation	T1057		-1.294	_SQT(ph)PPGVAT(ph)PPIPK_
MED1	Phosphorylation	S1155	0.689		_NSSQSGGKPGS(ph)SPITK_
MED1	Phosphorylation	S1156	0.829	1.055	_NSSQSGGKPGSS(ph)PITK_
MED1	Phosphorylation	S1192		-0.792	_PSSLM(ox)NPSLSKPNIS(ph)PSHSRPPGGSDK_
MED1	Phosphorylation	S1223	1.061	1.013	_AKS(ph)PISSGSGGSHM(ox)SGTSSSSGM(ox)K_
MED1	Phosphorylation	S1433	-0.191		_NYGS(ph)PLISGSTPK_
MED12	Ubiquitylation	K429		-0.439	_EIEQQIK(gl)ER_
MED12	Ubiquitylation	K531		-0.272	_AMVVAKLLEK(gl)_
MED12	Phosphorylation	S635	-1.278	-0.801	_GDLAFGAPGPRPPS(ph)PFDDPADDPEHK_
MED12	Ubiquitylation	K1001		-1.092	_VK(gl)NTIYCNVEPSESNMR_
MED12	Ubiquitylation	K1661		-1.781	_DVITCEPQGSLIDTK(gl)GNK_
MED12	Ubiquitylation	K1682		-0.745	_EGLQVSTK(gl)QK_
MED12	Ubiquitylation	K1684		-0.960	_EGLQVSTK(gl)QK_
MED13	Phosphorylation	S890		0.092	_IEVDEGFCS(ph)PKPSEIK_
MED13	Ubiquitylation	K1890		0.843	_NLQSLSK(gl)R_
MED14	Ubiquitylation	K176		-0.354	_DK(gl)IIPPDPITK_
MED14	Ubiquitylation	K487		0.044	_SVNDDMK(gl)R_
MED14	Ubiquitylation	K699		-0.410	_GITEETQK(gl)ALDR_
MED14	Phosphorylation	S986	-1.229	-1.699	_SVNEDDNPPS(ph)PIGGDM(ox)MDSLISQLQPPPQQQPFPK_
MED14	Ubiquitylation	K1256		-1.340	_VALSPK(gl)TNQTLQLK_
MED16	Ubiquitylation	K158		-0.972	_SGASSFGEK(gl)FSR_
MED16	Ubiquitylation	K252		-0.659	_VCVSVVSEK(gl)CR_
MED16	Ubiquitylation	K796		-1.345	_LHLGACPTEECK(gl)ACTR_
MED16	Ubiquitylation	K817		-0.515	_TTAVK(gl)QWEQR_
MED24	Phosphorylation	S862	1.164	0.238	_LLS(ph)SNEDDANILSS(ph)PTDR_
MED24	Phosphorylation	S863	2.413		_LLSS(ph)NEDDANILSS(ph)PTDR_
MED24	Phosphorylation	S873	0.174	0.861	_LLSSNEDDANILSS(ph)PTDR_
MED30	Phosphorylation	S2	-0.188	-0.097	_(ac)S(ph)TPPLAASGMAPGPFAGPQAQQAAR_
MED30	Phosphorylation	T3	-0.188	-0.624	_(ac)ST(ph)PPLAASGMAPGPFAGPQAQQAAR_
MED4	Ubiquitylation	K112		0.878	_DSDIQQLQK(gl)QLK_
MED4	Ubiquitylation	K150	-0.369		_KGAISSEEIIK(gl)YAHR_
NCOA3	Phosphorylation	S861	-0.217	-0.429	_AVS(ph)LDSPVSVGSSPPVK_
NCOA3	Phosphorylation	S870	-0.416	-0.360	_AVS(ph)LDSPVSVGS(ph)SPPVK_
NCOA3	Phosphorylation	S1333		-0.364	_VSS(ph)PPNAMMSSR_
NCOR1	Phosphorylation	S1195	-0.029	0.716	_MPIEDS(ph)SPEKGREEAASK_
NCOR1	Phosphorylation	S1196	0.087	0.141	_MPIEDSS(ph)PEKGR_
NCOR1	Phosphorylation	S1472	0.700	0.536	_AQLS(ph)PGIYDDTSAR_
NCOR1	Phosphorylation	S1977	-0.959	-0.974	_YETPSDAIEVIS(ph)PASSPAPPQEK_
NCOR1	Ubiquitylation	K1998		-2.086	_LQTYQPEVVK(gl)ANQAENDPTR_
NCOR1	Phosphorylation	S2120	0.148	0.154	_VS(ph)PENLVDK_
NCOR1	Phosphorylation	S2151	-1.006	-0.922	_SHVSSEPYEPIS(ph)PPQVPVVHEK_
NCOR1	Phosphorylation	S2184	0.120	0.226	_S(ph)PGSISYLPSFFTK_
NCOR1	Phosphorylation	S2187		0.396	_SPGS(ph)ISYLPSFFTK_
NSD1	Phosphorylation	S1510		0.148	_TATS(ph)PKETVEEGVEHDPGMPASK_
NSD1	Phosphorylation	S2471	-0.515	-0.677	_AAS(ph)PHQVTPQADEK_
NUP62	Phosphorylation	S408	1.068	1.163	_ELEDLLS(ph)PLEELVK_
NUP62	Ubiquitylation	K445	-0.151	-0.030	_LAENIDAQLK(gl)R_
NUP62	Ubiquitylation	K504	0.340	-0.091	_K(gl)VEEVTK(gl)VCEGR_
TAF7	Ubiquitylation	K40	-0.984	0.784	_AVQSGHVNLK(gl)DR_
TAF7	Phosphorylation	S171		1.574	_LLS(ph)TDAEAVSTR_
TAF7	Phosphorylation	S201	0.225	0.409	_EAENQGLDISS(ph)PGMSGHR_
THRAP3	Phosphorylation	S184	0.079	0.248	_SSS(ph)KDSRPSQAAGDNQGDEAK_
THRAP3	Phosphorylation	T210	3.824		_EQTFSGGT(ph)SQDTK_
THRAP3	Phosphorylation	S211	3.487	3.148	_EQTFSGGTS(ph)QDTK_
THRAP3	Phosphorylation	S232	-0.501	-0.585	_ASESSKPWPDATYGTGS(ph)ASR_
THRAP3	Phosphorylation	S243	0.422	0.427	_ASAVSELS(ph)PR_
THRAP3	Phosphorylation	S248	0.461	0.278	_ERS(ph)PALKSPLQSVVVR_
THRAP3	Phosphorylation	S253	0.721	1.235	_SPALKS(ph)PLQSVVVR_
THRAP3	Phosphorylation	S315		0.541	_KS(ph)PVGKS(ph)PPSTGSTYGSSQK_
THRAP3	Phosphorylation	S320	-0.234	-0.545	_KSPVGKS(ph)PPSTGSTYGSSQK_
THRAP3	Phosphorylation	S377	2.629	2.451	_IKEKGS(ph)FSDTGLGDGK_
THRAP3	Phosphorylation	S379	0.975	1.024	_GSFS(ph)DTGLGDGK_
THRAP3	Phosphorylation	S575	1.245	0.792	_MDS(ph)FDEDLARPSGLLAQER_
THRAP3	Phosphorylation	S672	0.274	0.190	_NKKS(ph)PEIHR_
THRAP3	Phosphorylation	S682	0.380	0.508	_IDIS(ph)PSTFR_
THRAP3	Phosphorylation	S684	0.619	0.637	_RIDISPS(ph)TFRK_
THRAP3	Phosphorylation	T874	-1.185	-1.519	_NREEEWDPEYT(ph)PK_
THRAP3	Phosphorylation	S928	0.752	0.713	_WAHDKFS(ph)GEEGEIEDDESGTENR_
THRAP3	Phosphorylation	S939	0.345	0.471	_FSGEEGEIEDDES(ph)GTENR_
THRAP3	Phosphorylation	T953	-0.085		_FSGEEGEIEDDESGTENREEKDNIQPT(ph)TE_
TRIP12	Phosphorylation	S354	-0.672	-0.510	_RSES(ph)PPAELPSLR_
TRIP12	Phosphorylation	S990		-1.351	_HLAESESLLTS(ph)PPK_
TRIP12	Phosphorylation	S1039	-1.279	-0.356	_DDSLDLS(ph)PQGR_
TRIP12	Ubiquitylation	K1049	0.143	0.864	_LSDVLK(gl)R_
TRIP12	Phosphorylation	S1064	0.034	-0.036	_YS(ph)PPRDDDKVDNQAK_
TRIP12	Ubiquitylation	K1086	-1.660	-1.398	_SPTTTQSPK(gl)SSFLASLNPK_
TRIP12	Ubiquitylation	K1096	2.593		_SSFLASLNPK(gl)TWGR_
TRIP12	Ubiquitylation	K1473		-0.085	_AQTAPTK(gl)TSPR_
TRIP12	Ubiquitylation	K1709	-0.044	-0.188	_GEEVTLSNPK(gl)GSQEGTK_