RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
JAG1	0	-0.260	0.070
CDK6	0	-0.190	0.160
CDK6	0	-0.190	0.160				-0.510	0.013
GLI3	0	-0.980	1.650
HES1	0	-0.940	0.860
TWIST1	0	-0.640	1.150
ITGB1	0	0.390	-0.650				0.101	-0.036
CTNNB1	0	0.490	-0.230
CTNNB1	0	0.490	-0.230	-0.415			0.628	0.215
RBPJ	0	1.900	-0.160	-0.367	0.284	0.723	-0.090	0.134
SIX2	0	1.040	-0.950		-0.334	0.495
SUZ12	0	-0.710	0.770		0.451	1.156
SUZ12	0	-0.710	0.770	-0.670			0.955	0.457
SOX2	0	-0.250	0.870
PRAME	0	-0.110	-0.120

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CDK6	Ubiquitylation	K3	0.121	0.039	_(ac)MEK(gl)DGLCR_
CDK6	Phosphorylation	S236		0.095	_QDDS(ph)PSGASYGQDYDLS(ph)PSR_
CDK6	Phosphorylation	S249		0.095	_QDDS(ph)PSGASYGQDYDLS(ph)PSR_
CDK6	Phosphorylation	S385		0.649	_HSSIS(ph)PVRLPLNSSLGAELSR_
CDK6	Phosphorylation	S420	0.004	-0.202	_ES(ph)KGSPVFLPR_
CDK6	Phosphorylation	S423	-0.155	-0.297	_GS(ph)PVFLPR_
CDK6	Phosphorylation	T514	0.364	0.570	_DSKPIALKEEIVT(ph)PK_
CDK6	Phosphorylation	S681	-2.532	-2.051	_HLLTDLPLPPELPGGDLS(ph)PPDS(ph)PEPK_
CDK6	Phosphorylation	S685		-2.729	_HLLTDLPLPPELPGGDLS(ph)PPDS(ph)PEPK_
CDK6	Phosphorylation	T692	-0.765	-1.849	_AIT(ph)PPQQPYK_
CDK6	Phosphorylation	S1082	-1.661	-0.980	_KETTSGTSTEPVKNS(ph)SPAPPQPAPGK_
CDK6	Phosphorylation	S1083	-1.093	-1.330	_NSS(ph)PAPPQPAPGK_
CDK6	Phosphorylation	T1244		-0.956	_RT(ph)PTMPQEEAAACPPHILPPEK_
CTNNB1	Ubiquitylation	K158		-1.265	_AIPELTK(gl)LLNDEDQVVVNK_
CTNNB1	Ubiquitylation	K180	-0.546	-0.636	_AAVM(ox)VHQLSK(gl)K_
CTNNB1	Ubiquitylation	K181	-0.717	-0.729	_AAVMVHQLSKK(gl)_
CTNNB1	Phosphorylation	S191	-0.024	0.129	_S(ph)PQMVSAIVR_
CTNNB1	Ubiquitylation	K435		-0.350	_NK(gl)MM(ox)VCQVGGIEALVR_
CTNNB1	Ubiquitylation	K496		-1.262	_LHYGLPVVVK(gl)_
CTNNB1	Phosphorylation	S552	1.233	1.224	_RTS(ph)MGGTQQQFVEGVR_
CTNNB1	Phosphorylation	T556	1.275	0.995	_RTSM(ox)GGT(ph)QQQFVEGVR_
CTNNB1	Ubiquitylation	K671	-0.941	-0.934	_MSEDKPQDYK(gl)K_
GLI3	Phosphorylation	S664	-0.582	-0.252	_S(ph)PGRPTQGALGEQQDLSNTTSK_
HES1	Ubiquitylation	K66		0.212	_TLILDALK(gl)K_
HES1	Ubiquitylation	K67		0.212	_TLILDALK(gl)K_
HES1	Ubiquitylation	K109	-0.891		_AQMTAALSTDPSVLGK(gl)YR_
ITGB1	Ubiquitylation	K774	0.402		_MNAK(gl)WDTGENPIYK_
ITGB1	Ubiquitylation	K784	-0.172	0.350	_WDTGENPIYK(gl)SAVTTVVNPK_
ITGB1	Ubiquitylation	K794	0.755	0.604	_SAVTTVVNPK(gl)YEGK_
JAG1	Ubiquitylation	K1142	-0.783		_HGANTVPIKDYENK(gl)_
PRAME	Ubiquitylation	K157		-2.418	_ASLYSFPEPEAAQPMTK(gl)K_
PRAME	Ubiquitylation	K158		-2.418	_ASLYSFPEPEAAQPMTK(gl)K_
SIX2	Ubiquitylation	K53	0.475		_AK(gl)AVVAFHR_
SOX2	Phosphorylation	S251	0.157	-0.109	_SEASSS(ph)PPVVTSSSHSR_
SUZ12	Ubiquitylation	K341	-0.110	-0.960	_ATWETILDGK(gl)R_
SUZ12	Ubiquitylation	K390	-0.696		_NSESLHQENK(gl)PGSVKPTQTIAVK_
SUZ12	Phosphorylation	S546	0.533	0.248	_ASM(ox)SEFLES(ph)EDGEVEQQR_
SUZ12	Phosphorylation	S583		-0.295	_LYFHSDTCLPLRPQEMEVDS(ph)EDEKDPEWLR_
TWIST1	Ubiquitylation	K150		-0.176	_IQTLK(gl)LAAR_