RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
ERCC2	2	-0.590	1.060	-0.491		1.066
EDF1	2	-2.250	4.580				1.600	-0.444
BRD4	2	-0.320	0.280	0.080	0.220	0.614	0.191	0.117
HMGB1	2	-1.590	3.400		2.856	-1.899	0.030	-0.792
SKI	1	-1.870	2.800		-1.139	-0.588
HIPK2	0	-0.990	0.680
EP300	0	-1.210	1.320	-1.089			-1.694	-0.723
HES1	0	-0.940	0.860
SMARCA4	0	-0.810	1.520	0.629	-0.158	0.141	0.337	0.333
TXN	0	1.900	-1.090		1.120		0.196	-5.026
CEBPG	0	-1.150	1.620
HMGB2	0	-0.350	0.170			-1.810	0.655	0.285
ITGA2	0	-0.370	0.660				0.847	0.435
NME1	0	0.510	-0.420				0.232	0.470
NME1	0	0.510	-0.420	-0.783	0.303	-0.394	-0.805	-0.898

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
BRD4	Phosphorylation	S469	-0.308	-1.544	_MPDEPEEPVVAVS(ph)SPAVPPPTK_
BRD4	Phosphorylation	S470	-0.308	-0.758	_MPDEPEEPVVAVSS(ph)PAVPPPTK_
BRD4	Phosphorylation	S1083	-1.699	-1.783	_EAPSPLMIHSPQMSQFQSLTHQS(ph)PPQQNVQPK_
BRD4	Phosphorylation	S1117	2.833	1.857	_IHS(ph)PIIR_
BRD4	Phosphorylation	S1126	1.336	0.890	_SEPFS(ph)PSLRPEPPKHPESIK_
CEBPG	Ubiquitylation	K98	-0.339		_VNQLK(gl)EENERLEAK_
CEBPG	Ubiquitylation	K113	0.032	0.273	_LLTK(gl)ELSVLK_
EDF1	Ubiquitylation	K102	0.382		_INEK(gl)PQVIADYESGR_
EP300	Phosphorylation	S1038	-0.672	-0.349	_TEIKEEEDQPSTSATQSS(ph)PAPGQSK_
EP300	Phosphorylation	S1726	0.994	0.627	_LGLGLDDESNNQQAAATQS(ph)PGDSRR_
EP300	Phosphorylation	S2328	-1.092	0.725	_PQSQPPHSSPS(ph)PR_
ERCC2	Ubiquitylation	K268	5.973	1.957	_CQGNLETLQK(gl)TVLR_
ERCC2	Ubiquitylation	K507		-2.034	_GNDQVAISSK(gl)FETR_
HES1	Ubiquitylation	K66		0.212	_TLILDALK(gl)K_
HES1	Ubiquitylation	K67		0.212	_TLILDALK(gl)K_
HES1	Ubiquitylation	K109	-0.891		_AQMTAALSTDPSVLGK(gl)YR_
HIPK2	Ubiquitylation	K492		-0.060	_YISQTQGLPAEYLLSAGTK(gl)TTR_
HIPK2	Ubiquitylation	K614		-0.350	_SCFQNMEICK(gl)R_
HMGB1	Ubiquitylation	K50	0.651		_WK(gl)TMSAK_
HMGB1	Ubiquitylation	K59	1.001	0.009	_GK(gl)FEDMAK_
HMGB1	Ubiquitylation	K114		0.314	_IK(gl)GEHPGLSIGDVAK_
HMGB1	Ubiquitylation	K127	0.018		_IKGEHPGLSIGDVAK(gl)K_
HMGB1	Ubiquitylation	K128	-0.407		_K(gl)LGEMWNNTAADDKQPYEK_
HMGB1	Ubiquitylation	K157	0.850		_YEK(gl)DIAAYR_
HMGB2	Ubiquitylation	K114	0.323		_IK(gl)SEHPGLSIGDTAK_
HMGB2	Ubiquitylation	K128	0.363		_K(gl)LGEMWSEQSAK_
HMGB2	Ubiquitylation	K147	0.205	-0.408	_DKQPYEQK(gl)AAK_
HMGB2	Ubiquitylation	K150	-0.251		_DKQPYEQKAAK(gl)_
NME1	Ubiquitylation	K37	0.192	0.188	_TFIAIK(gl)PDGVQR_
NME1	Ubiquitylation	K51	-0.368	0.345	_GLVGEIIK(gl)R_
NME1	Ubiquitylation	K56	-0.240		_FEQK(gl)GFR_
NME1	Ubiquitylation	K125	-0.693	-0.414	_VMLGETNPADSK(gl)PGTIR_
NME1	Ubiquitylation	K264	0.448	0.582	_NIIHGSDSVK(gl)SAEK_
SKI	Ubiquitylation	K294	-0.126	-0.054	_AYILLSQDYTGK(gl)EEQAR_
SKI	Ubiquitylation	K365	-0.244	-0.390	_TLAGSSNK(gl)SLGCVHPR_
SKI	Phosphorylation	S431		-0.475	_VVS(ph)SPPCAAAVSR_
SKI	Phosphorylation	S432	-0.742	-0.438	_VVSS(ph)PPCAAAVSR_
SKI	Phosphorylation	S480	-1.160	-1.491	_LTVDTPGAPETLAPVAAPEEDKDS(ph)EAEVEVESR_
SMARCA4	Ubiquitylation	K357	-0.934		_ITPIQK(gl)PR_
SMARCA4	Ubiquitylation	K405	0.109	1.148	_ATIELK(gl)ALR_
SMARCA4	Ubiquitylation	K437	-0.317		_DTALETALNAK(gl)AYKR_
SMARCA4	Ubiquitylation	K455	0.225		_ITEK(gl)LEK_
SMARCA4	Ubiquitylation	K496		0.923	_SVTGK(gl)IQK_
SMARCA4	Phosphorylation	S677	-0.880	-0.324	_KAENAEGQTPAIGPDGEPLDETSQMS(ph)DLPVK_
SMARCA4	Ubiquitylation	K1283	0.125		_ILAAAK(gl)YK_
SMARCA4	Phosphorylation	S1413	-0.265	0.515	_EVDYSDS(ph)LTEK_
SMARCA4	Phosphorylation	S1486	-0.713	-0.935	_LS(ph)PNPPNLTK_
TXN	Ubiquitylation	K94	0.520		_VGEFSGANK(gl)EK_