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Query: EDF1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
EDF1 2 6.118 -2.250 4.580 1.600 -0.444

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
EDF1 Ubiquitylation K102 0.382 _INEK(gl)PQVIADYESGR_

Background Information for EDF1:


Pubmed-EDF1 »
Uniprot-EDF1 »
Biogrid-EDF1 »
ProteomicsDB-EDF1 »

Tumorportal-EDF1 »
COSMIC-EDF1 »
GenomeRNAi-EDF1 »
Genecards-EDF1


Protein-protein Interactions for EDF1
Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in EDF1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Lambda_DNA-bd_dom IPR010982 0


Protein complexes (CORUM database) featuring EDF1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring EDF1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0003713 transcription coactivator activity Database 3.68
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0005516 calmodulin binding Database 0.74
Category members GO Category GO:0005622 intracellular Database 0.32
Category members GO Category GO:0007275 multicellular organismal development Database 0.31
Category members GO Category GO:0045893 positive regulation of transcription, DNA-dependent Database 0.28
Category members GO Category GO:0043565 sequence-specific DNA binding Database 0.18
Category members GO Category GO:0005669 transcription factor TFIID complex Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0019216 regulation of lipid metabolic process Database 0
Category members GO Category GO:0043388 positive regulation of DNA binding Database 0
Category members GO Category GO:0045446 endothelial cell differentiation Database 0


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