RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PAM	1	0.410	-0.620
SYPL1	0	-0.600	1.070				0.482	0.154
VAMP3	0	-0.800	0.690				0.418
VAMP3	0	-0.800	0.690
CDC42	0	-0.170	0.490	-0.597			-1.527	-1.013
CDC42	0	1.240	-0.940	-0.597			-1.527	-1.013
TGFB1	0	-0.550	1.050
GARS	0	0.600	0.070	-0.091	-0.963	-1.068	0.415	0.276
VAMP8	0	0.400	-0.770
TGFB3	0	0.900	-0.540
RAB11FIP5	0	1.040	-0.620					-0.819
HSPD1	0	1.020	-0.650	1.151	0.719	-0.757
SLC30A5	0	0.070	-0.510					1.107
EBAG9	0	-0.450	0.740
ATP7A	0	-0.210	0.370
RAB3B	0	-0.490	0.220
RAB3B	0	-0.490	0.220				-0.216
HGS	0	0.020	0.300	-0.211			0.737	0.264
MYO5A	0	-0.820	1.800				0.524	0.248
RAB12	0	0.390	0.030

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ATP7A	Ubiquitylation	K333	0.029		_K(gl)AIEAVSPGLYR_
CDC42	Ubiquitylation	K173	-1.839		_DDPSTIEK(gl)LAK_
CDC42	Ubiquitylation	K178	-0.801	-0.716	_NK(gl)QKPITPETAEK_
CDC42	Ubiquitylation	K180	-1.806		_QK(gl)PITPETAEK(gl)LAR_
CDC42	Ubiquitylation	K189	-1.082		_QKPITPETAEK(gl)LAR_
CDC42	Ubiquitylation	K198	0.550	1.159	_AVK(gl)YVECSALTQK_
CDC42	Ubiquitylation	K208	-0.937	0.038	_YVECSALTQK(gl)GLK_
CDC42	Ubiquitylation	K228	-2.488		_NVFDEAILAALEPPEPK(gl)K_
CDC42	Ubiquitylation	K229	-1.254		_NVFDEAILAALEPPEPKK(gl)_
EBAG9	Phosphorylation	S36	0.426	0.505	_KLS(ph)GDQITLPTTVDYSSVPK_
GARS	Ubiquitylation	K82	-0.419		_LK(gl)EDKAPQVDVDK_
GARS	Ubiquitylation	K99	0.546	0.812	_AVAELK(gl)AR_
GARS	Ubiquitylation	K108	0.135		_VLEAK(gl)ELALQPK_
GARS	Ubiquitylation	K129		0.405	_MEDTLK(gl)R_
GARS	Ubiquitylation	K207	0.107		_DVK(gl)NGECFR_
GARS	Ubiquitylation	K224	0.110		_AHLQK(gl)LMSDKK_
GARS	Ubiquitylation	K506	0.535		_GAIGK(gl)AYKK_
GARS	Ubiquitylation	K559	-0.409	-0.291	_DMINVK(gl)R_
GARS	Ubiquitylation	K733	0.251		_YPLFEGQETGK(gl)KETIEE_
GARS	Ubiquitylation	K734	0.251		_YPLFEGQETGK(gl)KETIEE_
HGS	Ubiquitylation	K126	0.088	0.464	_YK(gl)VVQDTYQIMK_
HGS	Ubiquitylation	K192	0.015	0.751	_ACGQIFCGK(gl)CSSK_
HGS	Ubiquitylation	K202	-0.163	0.558	_YSTIPK(gl)FGIEK_
HGS	Ubiquitylation	K207	-0.193	0.798	_FGIEK(gl)EVR_
HGS	Ubiquitylation	K283	-0.826	-0.270	_QK(gl)STYTSYPK_
HGS	Ubiquitylation	K337	0.097		_NYWEK(gl)KQEEAR_
HGS	Ubiquitylation	K473	-0.154		_LYYEGLQDK(gl)LAQIR_
HGS	Ubiquitylation	K513	-0.289		_QIQLAQK(gl)LEIMR_
HGS	Ubiquitylation	K520	0.211	1.230	_QK(gl)KQEYLEVQR_
HGS	Ubiquitylation	K521	-1.344	1.230	_K(gl)QEYLEVQR_
HGS	Ubiquitylation	K551	-0.260	0.554	_LEQQK(gl)QTVQM(ox)R_
HSPD1	Phosphorylation	S70	0.210	0.487	_TVIIEQSWGS(ph)PK_
HSPD1	Ubiquitylation	K82	-0.300		_DGVTVAK(gl)SIDLK_
HSPD1	Ubiquitylation	K87	-0.005	0.292	_SIDLK(gl)DKYK_
HSPD1	Ubiquitylation	K130		-0.428	_EGFEK(gl)ISK_
HSPD1	Ubiquitylation	K233	0.853	0.024	_GYISPYFINTSK(gl)GQK_
HSPD1	Ubiquitylation	K292	0.339		_LK(gl)VGLQVVAVK_
MYO5A	Phosphorylation	S600	0.774	0.889	_AIS(ph)PTSATSSGR_
MYO5A	Ubiquitylation	K1232	-1.807		_ALSEK(gl)SAPEVTAPGAPAYR_
MYO5A	Phosphorylation	S1677	0.994	0.878	_TSS(ph)IADEGTYTLDSILR_
PAM	Ubiquitylation	K716		-1.381	_TDTK(gl)EFVR_
PAM	Phosphorylation	S918	0.585	1.654	_GKGS(ph)GGLNLGNFFASR_
RAB11FIP5	Phosphorylation	S188	0.498	-1.279	_DKPRS(ph)PFSK_
RAB11FIP5	Phosphorylation	S307	0.920	0.806	_TYS(ph)DEANQMR_
RAB11FIP5	Phosphorylation	S393		0.820	_S(ph)NSSSEAVLGQEELSAQAK_
RAB11FIP5	Phosphorylation	S395	0.748	0.537	_SNS(ph)SSEAVLGQEELSAQAK_
RAB11FIP5	Phosphorylation	S494		0.084	_GGPILGAS(ph)PHHSSSGEEK_
RAB11FIP5	Ubiquitylation	K560	-0.629		_LK(gl)TVTSGSIQPVTQAPQAGQMVDTKR_
RAB11FIP5	Ubiquitylation	K583	-0.213	-0.841	_TVTSGSIQPVTQAPQAGQMVDTK(gl)R_
RAB11FIP5	Ubiquitylation	K586	0.485	0.189	_LK(gl)DSAVLDQSAK_
RAB12	Phosphorylation	S21	-0.451	0.146	_RAGGGGGLGAGS(ph)PALSGGQGR_
RAB12	Ubiquitylation	K172	0.251	0.981	_QQGEK(gl)FAQQITGMR_
RAB3B	Ubiquitylation	K8	0.091	0.366	_(ac)ASVTDGK(gl)TGVK_
RAB3B	Phosphorylation	S190		1.210	_MSDS(ph)LDTDPSMLGSSK_
RAB3B	Ubiquitylation	K202	-0.287	0.224	_MSDSLDTDPSMLGSSK(gl)NTR_
SLC30A5	Ubiquitylation	K235		0.440	_LSVDVGGAK(gl)R_
SLC30A5	Ubiquitylation	K300		0.253	_MEVSK(gl)CAR_
SLC30A5	Phosphorylation	S378		0.328	_GTLIGYS(ph)PEGTPLYNFMGDAFQHSSQSIPR_
SLC30A5	Ubiquitylation	K404		0.832	_FIK(gl)ESLK_
SLC30A5	Ubiquitylation	K756	-2.508	-0.094	_QMESMK(gl)YCK_
SLC30A5	Ubiquitylation	K759	-1.161	-0.391	_YCK(gl)DGTYIM_
TGFB1	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
TGFB3	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
VAMP3	Phosphorylation	T9	0.318	-0.040	_(ac)STGPTAAT(ph)GSNR_
VAMP3	Phosphorylation	S11	0.474	0.952	_(ac)STGPTAATGS(ph)NR_
VAMP3	Ubiquitylation	K54	0.408	0.792	_VNVDK(gl)VLER_
VAMP3	Phosphorylation	S58	-0.407	0.612	_ADALQAGAS(ph)QFETSAAK_
VAMP3	Ubiquitylation	K61	0.558	0.387	_VLERDQK(gl)LSELDDR_
VAMP3	Phosphorylation	S63		0.374	_ADALQAGASQFETS(ph)AAK_
VAMP8	Ubiquitylation	K47	0.262	0.420	_NK(gl)TEDLEATSEHFK_
VAMP8	Phosphorylation	S55	0.753	0.547	_NKTEDLEATS(ph)EHFK_
VAMP8	Ubiquitylation	K59	-0.052		_NKTEDLEATSEHFK(gl)TTSQK_