RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PAFAH1B1	1	0.820	-0.330				1.632	0.711
CHL1	1
ATP1A2	0	0.000	0.440	0.377	0.914	-1.883	0.083	0.031
HIPK2	0	-0.990	0.680
ATP1A3	0	-0.010	0.450	0.377	0.914	-1.883	0.083	0.031
ATP1A3	0	-0.010	0.450
HTRA2	0	1.220	-0.530		0.602		-0.023	1.287
PARK7	0	-0.660	0.930
TBCE	0	1.020	-0.880
TRMT1L	0	1.210	-0.540		-1.420	-0.095		-1.436
PPT1	0	1.320	-0.730
TMOD1	0	-0.360	-0.060	0.837			-0.008
APP	0	0.100	-0.260					0.285
EPS8	0	-0.740	0.680
EPS8	0	-0.740	0.680					1.272
CSTB	0	1.310	-0.560
PBX3	0	-0.340	0.140
BTBD9	0	0.870	-0.670
GIGYF2	0	-0.660	0.630
GIGYF2	0	-0.660	0.630	-0.833			-0.034	-0.175

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
APP	Ubiquitylation	K751	-1.778	-1.280	_HLSK(gl)M(ox)QQNGYENPTYK_
ATP1A2	Ubiquitylation	K9	0.245	0.226	_DK(gl)YEPAAVSEQGDKK_
ATP1A2	Phosphorylation	S16	-0.121	0.100	_DKYEPAAVS(ph)EQGDKK_
ATP1A2	Ubiquitylation	K22	0.726		_DKYEPAAVSEQGDKK(gl)_
ATP1A2	Ubiquitylation	K24	0.135		_YEPAAVSEQGDKKGK(gl)_
ATP1A2	Ubiquitylation	K36	1.089	0.875	_DMDELK(gl)K_
ATP1A2	Ubiquitylation	K37	1.220		_DMDELK(gl)KEVSMDDHK_
ATP1A2	Ubiquitylation	K45	-0.107		_EVSMDDHK(gl)LSLDELHR_
ATP1A2	Ubiquitylation	K54	-1.233	0.206	_K(gl)YGTDLSR_
ATP1A2	Ubiquitylation	K156	-1.024	0.552	_SSK(gl)IMESFK_
ATP1A2	Ubiquitylation	K162	-0.474	0.225	_IMESFK(gl)NMVPQQALVIR_
ATP1A2	Ubiquitylation	K212	-0.693	-0.230	_IISANGCK(gl)VDNSSLTGESEPQTR_
ATP1A2	Ubiquitylation	K377	-1.676	-0.190	_NLEAVETLGSTSTICSDK(gl)TGTLTQNR_
ATP1A2	Ubiquitylation	K444	-0.592	-0.292	_AVFQANQENLPILK(gl)R_
ATP1A2	Ubiquitylation	K468	-0.291	0.462	_CIELCCGSVK(gl)EMR_
ATP1A2	Ubiquitylation	K476		1.195	_YAK(gl)IVEIPFNSTNK_
ATP1A2	Ubiquitylation	K508		-1.151	_NPNTSEPQHLLVMK(gl)GAPER_
ATP1A2	Ubiquitylation	K605	0.393	0.204	_AAVPDAVGK(gl)CR_
ATP1A2	Ubiquitylation	K625	-2.291	-0.674	_VIMVTGDHPITAK(gl)AIAK_
ATP1A2	Ubiquitylation	K629		0.204	_AIAK(gl)GVGIISEGNETVEDIAAR_
ATP1A2	Ubiquitylation	K661	-1.060	-0.037	_DAK(gl)ACVVHGSDLK_
ATP1A2	Ubiquitylation	K698	-1.846	-0.336	_TSPQQK(gl)LIIVEGCQR_
ATP1A2	Ubiquitylation	K726	-1.405	-0.328	_QGAIVAVTGDGVNDSPALK(gl)K_
ATP1A2	Ubiquitylation	K727	-1.257	-0.518	_QGAIVAVTGDGVNDSPALKK(gl)_
ATP1A2	Ubiquitylation	K773		0.165	_LIFDNLK(gl)K_
ATP1A2	Ubiquitylation	K840	-1.467	-0.964	_NPK(gl)TDKLVNER_
ATP1A2	Ubiquitylation	K843		0.143	_TDK(gl)LVNER_
ATP1A2	Ubiquitylation	K950		0.029	_NSVFQQGMK(gl)NK_
ATP1A2	Ubiquitylation	K952	-1.917	0.295	_NSVFQQGMKNK(gl)_
ATP1A3	Ubiquitylation	K9	0.245	0.226	_DK(gl)YEPAAVSEQGDKK_
ATP1A3	Phosphorylation	S16	-0.121	0.100	_DKYEPAAVS(ph)EQGDKK_
ATP1A3	Ubiquitylation	K22	0.726		_DKYEPAAVSEQGDKK(gl)_
ATP1A3	Ubiquitylation	K24	0.135		_YEPAAVSEQGDKKGK(gl)_
ATP1A3	Ubiquitylation	K36	1.089	0.875	_DMDELK(gl)K_
ATP1A3	Ubiquitylation	K37	1.220		_DMDELK(gl)KEVSMDDHK_
ATP1A3	Ubiquitylation	K45	-0.107		_EVSMDDHK(gl)LSLDELHR_
ATP1A3	Ubiquitylation	K54	-1.233	0.206	_K(gl)YGTDLSR_
ATP1A3	Ubiquitylation	K156	-1.024	0.552	_SSK(gl)IMESFK_
ATP1A3	Ubiquitylation	K162	-0.474	0.225	_IMESFK(gl)NMVPQQALVIR_
ATP1A3	Ubiquitylation	K212	-0.693	-0.230	_IISANGCK(gl)VDNSSLTGESEPQTR_
ATP1A3	Ubiquitylation	K377	-1.676	-0.190	_NLEAVETLGSTSTICSDK(gl)TGTLTQNR_
ATP1A3	Ubiquitylation	K434		0.025	_GGQDNIPVLK(gl)R_
ATP1A3	Ubiquitylation	K444	-0.592	-0.292	_AVFQANQENLPILK(gl)R_
ATP1A3	Ubiquitylation	K468	-0.291	0.462	_CIELCCGSVK(gl)EMR_
ATP1A3	Ubiquitylation	K476		1.195	_YAK(gl)IVEIPFNSTNK_
ATP1A3	Ubiquitylation	K508		-1.151	_NPNTSEPQHLLVMK(gl)GAPER_
ATP1A3	Ubiquitylation	K605	0.393	0.204	_AAVPDAVGK(gl)CR_
ATP1A3	Ubiquitylation	K625	-2.291	-0.674	_VIMVTGDHPITAK(gl)AIAK_
ATP1A3	Ubiquitylation	K629		0.204	_AIAK(gl)GVGIISEGNETVEDIAAR_
ATP1A3	Ubiquitylation	K661	-1.060	-0.037	_DAK(gl)ACVVHGSDLK_
ATP1A3	Ubiquitylation	K698	-1.846	-0.336	_TSPQQK(gl)LIIVEGCQR_
ATP1A3	Ubiquitylation	K726	-1.405	-0.328	_QGAIVAVTGDGVNDSPALK(gl)K_
ATP1A3	Ubiquitylation	K727	-1.257	-0.518	_QGAIVAVTGDGVNDSPALKK(gl)_
ATP1A3	Ubiquitylation	K773		0.165	_LIFDNLK(gl)K_
ATP1A3	Ubiquitylation	K840	-1.467	-0.964	_NPK(gl)TDKLVNER_
ATP1A3	Ubiquitylation	K843		0.143	_TDK(gl)LVNER_
ATP1A3	Ubiquitylation	K950		0.029	_NSVFQQGMK(gl)NK_
ATP1A3	Ubiquitylation	K952	-1.917	0.295	_NSVFQQGMKNK(gl)_
BTBD9	Ubiquitylation	K281		0.159	_GMLIPEENIATMK(gl)YGAQVVK_
BTBD9	Ubiquitylation	K288		0.273	_YGAQVVK(gl)GELK_
CHL1	Phosphorylation	T91	4.193		_IIPSNNS(ph)GTFR_
CSTB	Ubiquitylation	K91	-0.129		_AK(gl)HDELTYF_
EPS8	Phosphorylation	S625		-2.045	_PADTPPAPS(ph)PPPTPAPVPVPLPPSTPAPVPVSK_
GIGYF2	Phosphorylation	S20	1.394	0.572	_ALSS(ph)GGSITS(ph)PPLSPALPK_
GIGYF2	Phosphorylation	T25	-1.198	-0.724	_ALSSGGSIT(ph)SPPLSPALPK_
GIGYF2	Phosphorylation	S26	-1.157	-0.630	_ALSSGGSITS(ph)PPLSPALPK_
GIGYF2	Phosphorylation	S30	-1.557	-1.373	_ALSSGGSITS(ph)PPLS(ph)PALPK_
GIGYF2	Phosphorylation	T404	-0.311	-0.134	_PGT(ph)PSDHQSQEASQFER_
GIGYF2	Ubiquitylation	K1007	0.724	-1.404	_ALQQQQQQQQQK(gl)LSGWGNVSKPSGTTK_
GIGYF2	Ubiquitylation	K1016		-0.562	_LSGWGNVSK(gl)PSGTTK_
GIGYF2	Ubiquitylation	K1106	0.994		_NSNMGFWDDAVK(gl)EVGPR_
GIGYF2	Ubiquitylation	K1125	0.915	-0.414	_NNASLSK(gl)SVGVSNR_
HIPK2	Ubiquitylation	K492		-0.060	_YISQTQGLPAEYLLSAGTK(gl)TTR_
HIPK2	Ubiquitylation	K614		-0.350	_SCFQNMEICK(gl)R_
HTRA2	Ubiquitylation	K237	-1.868	-0.270	_IQTK(gl)EPLPTLPLGR_
PAFAH1B1	Ubiquitylation	K76	-0.530		_LNEAK(gl)EEFTSGGPLGQK_
PARK7	Ubiquitylation	K41	0.222	0.590	_VTVAGLAGK(gl)DPVQCSR_
PARK7	Ubiquitylation	K93	-0.291		_EILK(gl)EQENR_
PARK7	Ubiquitylation	K132	0.639		_VTTHPLAKDK(gl)_
PBX3	Ubiquitylation	K195	-1.614		_TRPISPK(gl)EIER_
PPT1	Ubiquitylation	K174		-0.445	_TLNAGAYSK(gl)VVQER_
PPT1	Ubiquitylation	K224		1.077	_NLMALKK(gl)_
PPT1	Ubiquitylation	K253		0.222	_SGQAK(gl)ETIPLQETSLYTQDR_
TBCE	Ubiquitylation	K128	0.529		_QQSQLSK(gl)LQEVSLR_
TBCE	Ubiquitylation	K145	-0.691		_NCAVSCAGEK(gl)GGVAEACPNIR_
TRMT1L	Phosphorylation	S66	-3.763		_DSAGVPAPAPDSALDSAPTPASAPAPAPALAQAPALS(ph)PSLASAPEEAK_