bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: PBX3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PBX3 0 -1.474 -0.340 0.140

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PBX3 Ubiquitylation K195 -1.614 _TRPISPK(gl)EIER_

Background Information for PBX3:


Pubmed-PBX3 »
Uniprot-PBX3 »
Biogrid-PBX3 »
ProteomicsDB-PBX3 »

Tumorportal-PBX3 »
COSMIC-PBX3 »
GenomeRNAi-PBX3 »
Genecards-PBX3


Protein-protein Interactions for PBX3
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait C12orf34 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C16orf71 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C5orf24 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CCDC120 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LMX1B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MAB21L1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MAB21L2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MAGEA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MEIS2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMOD3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VWA5A Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PBX3
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Homeobox_dom IPR001356 0.63
Category members PBX IPR005542 0
Category members Homeodomain-like IPR009057 0


Protein complexes (CORUM database) featuring PBX3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PBX3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members GO Category GO:0005667 transcription factor complex Database 0.19
Category members GO Category GO:0043565 sequence-specific DNA binding Database 0.18
Category members GO Category GO:0007585 respiratory gaseous exchange Database 0.08
Category members GO Category GO:0002087 regulation of respiratory gaseous exchange by neurological system process Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0008344 adult locomotory behavior Database 0
Category members GO Category GO:0021516 dorsal spinal cord development Database 0
Category members GO Category GO:0048666 neuron development Database 0


.

© Copyright Svejstrup Laboratory 2015