bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: TBCE

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TBCE 0 0.529 1.020 -0.880

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TBCE Ubiquitylation K128 0.529 _QQSQLSK(gl)LQEVSLR_
TBCE Ubiquitylation K145 -0.691 _NCAVSCAGEK(gl)GGVAEACPNIR_

Background Information for TBCE:





Protein-protein Interactions for TBCE

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BHMT2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CLCC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CYP1A1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HSPA8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NFKBIA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SERBP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SFTA2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRIM11 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZFC3H1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TBCE

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ubiquitin-rel_dom IPR029071 1.79
Category members CAP-Gly_domain IPR000938 0.04
Category members Ribosomal_S21e IPR001931 0


Protein complexes (CORUM database) featuring TBCE

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TBCE

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003735 structural constituent of ribosome Database INF
Category members GO Category GO:0006412 translation Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005840 ribosome Database 12.2
Category members Pathway Pathway_11 REACTOME_METABOLISM_OF_PROTEINS 0 12.01
Category members GO Category GO:0044267 cellular protein metabolic process Database 10.42
Category members GO Category GO:0006457 protein folding Database 4.93
Category members GO Category GO:0051087 chaperone binding Database 1.69
Category members GO Category GO:0005874 microtubule Database 1.21
Category members Pathway Pathway_742 REACTOME_PROTEIN_FOLDING 0 0.9
Category members GO Category GO:0051084 'de novo' posttranslational protein folding Database 0.63
Category members GO Category GO:0000226 microtubule cytoskeleton organization Database 0.5
Category members GO Category GO:0048589 developmental growth Database 0.45
Category members GO Category GO:0005622 intracellular Database 0.32
Category members GO Category GO:0007409 axonogenesis Database 0.13
Category members Pathway Pathway_1295 REACTOME_POST_CHAPERONIN_TUBULIN_FOLDING_PATHWAY 0 0.07
Category members GO Category GO:0048936 peripheral nervous system neuron axonogenesis Database 0.05
Category members GO Category GO:0007023 post-chaperonin tubulin folding pathway Database 0
Category members GO Category GO:0008344 adult locomotory behavior Database 0
Category members GO Category GO:0009791 post-embryonic development Database 0


© Copyright Svejstrup Laboratory 2015