RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
SEC61A1	2	1.170	-1.120				0.304	0.263
SEC62	1	0.680	-0.300	1.850			0.588	0.566
RANGRF	1	-1.570	2.600
STAU1	1	0.240	0.480	-1.307	-0.562	-0.501	-1.328	-0.200
PSEN1	0	0.930	-1.110
SUCO	0	-0.620	0.980					0.408
HM13	0	-0.640	0.080				-0.261	0.099
RPN2	0	1.000	-0.610
RPN2	0	1.000	-0.610	0.994
RAB14	0	0.630	-0.150				0.314	0.321
GLUL	0	0.010	-0.210					-2.755
EPHA5	0	-0.280	0.790
CDKAL1	0	0.070	0.220				0.046	0.108
SLC7A11	0	-0.760	1.480
RPN1	0	0.940	0.740	0.262	0.018	-0.781	0.557	0.400
FKRP	0	0.150	-0.420					-0.393

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CDKAL1	Phosphorylation	S3		1.102	_PS(ph)ASCDTLLDDIEDIVSQEDSKPQDR_
CDKAL1	Phosphorylation	S5		0.811	_PSAS(ph)CDTLLDDIEDIVSQEDSKPQDR_
CDKAL1	Ubiquitylation	K343		0.633	_EYCVADFK(gl)R_
CDKAL1	Ubiquitylation	K496		-1.923	_GQPVSDAK(gl)VYTPSISKPLAK_
CDKAL1	Ubiquitylation	K516	0.544	0.286	_GEVSGLTK(gl)DFR_
EPHA5	Ubiquitylation	K657	0.533		_LKLPGK(gl)R_
GLUL	Ubiquitylation	K11	-0.594	0.440	_(ac)TTSASSHLNK(gl)GIK_
GLUL	Ubiquitylation	K14	-0.422	-0.252	_GIK(gl)QVYMSLPQGEK_
GLUL	Ubiquitylation	K91		-0.709	_DPFRK(gl)DPNK_
GLUL	Ubiquitylation	K95	0.072	-0.295	_DPNK(gl)LVLCEVFK_
GLUL	Ubiquitylation	K276	-0.768		_YIEEAIEK(gl)LSK_
GLUL	Ubiquitylation	K279		0.464	_YIEEAIEKLSK(gl)_
GLUL	Ubiquitylation	K291		-0.474	_AYDPK(gl)GGLDNARR_
GLUL	Ubiquitylation	K372	-1.094	-0.523	_TCLLNETGDEPFQYK(gl)N_
HM13	Ubiquitylation	K61	-0.651	0.407	_GK(gl)NASDMPETITSR_
HM13	Ubiquitylation	K241		1.147	_SFEAPIK(gl)LVFPQDLLEK_
HM13	Ubiquitylation	K285		1.086	_FDISLKK(gl)_
HM13	Ubiquitylation	K370	-0.544	0.500	_EGTEASASK(gl)GLEK_
PSEN1	Phosphorylation	S313		0.844	_VSKNS(ph)KYNAESTER_
PSEN1	Ubiquitylation	K314	0.016	0.414	_NSK(gl)YNAESTER_
PSEN1	Phosphorylation	S366	-0.340	0.055	_AAVQELSS(ph)SILAGEDPEER_
PSEN1	Phosphorylation	S367	0.005	0.066	_AAVQELSSS(ph)ILAGEDPEER_
RAB14	Ubiquitylation	K170	-1.161		_TGENVEDAFLEAAK(gl)K_
RAB14	Ubiquitylation	K171	-1.161	-0.915	_TGENVEDAFLEAAKK(gl)_
RAB14	Ubiquitylation	K193		-0.640	_IYQNIQDGSLDLNAAESGVQHK(gl)PSAPQGGR_
RANGRF	Ubiquitylation	K113		0.395	_QQIAK(gl)ENQQVAK_
RPN1	Ubiquitylation	K187	0.225	0.149	_NVESYTK(gl)LGNPTR_
RPN1	Ubiquitylation	K258		-0.934	_HTGAVLK(gl)GPFSR_
RPN1	Ubiquitylation	K517	0.437	0.831	_DISTLNSGKK(gl)_
RPN1	Ubiquitylation	K538	0.059	0.574	_LK(gl)TEGSDLCDRVSEMQK_
RPN1	Ubiquitylation	K553	-0.570	0.943	_VSEMQK(gl)LDAQVK_
RPN1	Ubiquitylation	K564	-1.249		_ELVLK(gl)SAVEAER_
RPN1	Ubiquitylation	K576	-0.148		_LVAGK(gl)LKK_
RPN1	Ubiquitylation	K578	-0.355		_LK(gl)KDTYIENEK_
RPN1	Ubiquitylation	K587	-1.128		_DTYIENEK(gl)LISGK_
RPN2	Ubiquitylation	K70		1.069	_K(gl)ACTYIR_
RPN2	Ubiquitylation	K403		-0.045	_VTYPAKAK(gl)_
RPN2	Ubiquitylation	K627	-0.931	0.454	_MLAQQAVK(gl)R_
SEC61A1	Ubiquitylation	K113		-0.118	_IIEVGDTPK(gl)DR_
SEC61A1	Ubiquitylation	K394		1.586	_TWIEVSGSSAK(gl)DVAK_
SEC61A1	Ubiquitylation	K398		0.253	_DVAK(gl)QLK_
SEC61A1	Ubiquitylation	K401	-1.030	0.553	_QLK(gl)EQQMVMR_
SEC61A1	Phosphorylation	S414		0.827	_ETS(ph)MVHELNR_
SEC62	Ubiquitylation	K19	0.553	0.063	_IQEVGEPSK(gl)EEK_
SEC62	Ubiquitylation	K22	0.368		_RIQEVGEPSKEEK(gl)_
SEC62	Ubiquitylation	K26	0.519	0.921	_AVAK(gl)YLR_
SEC62	Ubiquitylation	K35	0.603		_FNCPTK(gl)STNMMGHR_
SEC62	Ubiquitylation	K60	0.986		_AVDCLLDSK(gl)WAK_
SEC62	Ubiquitylation	K65	1.149	1.308	_AK(gl)KGEEALFTTR_
SEC62	Ubiquitylation	K66	0.507		_K(gl)GEEALFTTR_
SEC62	Phosphorylation	T375	0.112	-0.148	_EELEQQT(ph)DGDCEEDEEEENDGETPK_
SLC7A11	Ubiquitylation	K4	0.814	0.337	_K(gl)PVVSTISK_
SLC7A11	Ubiquitylation	K12	0.383	-0.300	_KPVVSTISK(gl)GGYLQGNVNGR_
SLC7A11	Phosphorylation	S26	-1.054	-0.909	_LPS(ph)LGNKEPPGQEK_
SLC7A11	Ubiquitylation	K30	0.117	-0.427	_LPSLGNK(gl)EPPGQEK_
SLC7A11	Ubiquitylation	K222		0.668	_GQTQNFK(gl)DAFSGR_
SLC7A11	Ubiquitylation	K483		0.668	_IMSEK(gl)ITR_
STAU1	Phosphorylation	S16		2.213	_(ac)S(ph)QVQVQVQNPSAALSGSQILNK_
STAU1	Phosphorylation	T291	-0.635	-1.062	_TKPIVKPQT(ph)SPEYGQGINPISR_
STAU1	Phosphorylation	S292		-1.034	_TKPIVKPQTS(ph)PEYGQGINPISR_
STAU1	Ubiquitylation	K521	-0.050		_VQGFQVEYK(gl)DFPK_
SUCO	Phosphorylation	S1233	1.063	0.911	_SKS(ph)LQLTGK_