RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
SH3GL1	1	0.960	-1.010
TPM3	1	2.410	-1.030	-0.178	0.366	-0.380	0.330	-1.062
TPM3	1	2.410	-1.030				-1.315
VCAM1	1	1.250	-0.880				-0.412	-0.373
SVIL	1	-1.650	2.870		-1.295	-0.292	0.646	0.534
WDR1	0	0.340	-0.310	0.114			-0.178	-0.143
SH3PXD2A	0	1.170	-0.770
ACTR3	0	1.800	-1.060	0.313	-0.076	0.489	-0.053	-0.011
RHOU	0	0.620	-1.000
PTPN12	0	-0.330	-0.270
DBNL	0	0.940	-0.940	0.425
DBNL	0	1.040	-0.600	0.425
DBNL	0	0.940	-0.940	0.111			0.457	0.226
DBNL	0	1.040	-0.600	0.111			0.457	0.226
HNRNPK	0	-0.160	0.450	-0.273	-1.081	-0.609	-0.231	-0.195
HNRNPK	0	-0.160	0.450
TPM4	0	1.200	0.010	-0.178	0.366	-0.380	0.330	-1.062
SH3PXD2B	0	0.340	-0.580

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ACTR3	Ubiquitylation	K225	-1.054	-1.094	_DREVGIPPEQSLETAK(gl)AVK_
ACTR3	Ubiquitylation	K251	-1.416		_EFNKYDTDGSK(gl)WIK_
ACTR3	Ubiquitylation	K264	-0.776		_QYTGINAISK(gl)K_
ACTR3	Ubiquitylation	K265		-0.295	_QYTGINAISKK(gl)_
ACTR3	Ubiquitylation	K348	0.619	0.713	_LK(gl)LSEELSGGR_
DBNL	Ubiquitylation	K144	0.756		_ASGANYSFHK(gl)ESGR_
DBNL	Ubiquitylation	K164	-0.807	0.448	_FQDVGPQAPVGSVYQK(gl)TNAVSEIKR_
DBNL	Ubiquitylation	K172	-0.071		_TNAVSEIK(gl)R_
DBNL	Phosphorylation	S232		-0.858	_YQEQGGEAS(ph)PQR_
DBNL	Phosphorylation	S269	-0.006	-0.553	_AM(ox)S(ph)TTSISSPQPGK_
DBNL	Phosphorylation	S272	-0.752	-0.377	_AMS(ph)TTS(ph)ISSPQPGK_
DBNL	Phosphorylation	S274	-0.547	-0.544	_AM(ox)STTSIS(ph)SPQPGK_
DBNL	Phosphorylation	S275	-0.547	0.433	_AMSTTSISS(ph)PQPGK_
DBNL	Ubiquitylation	K280	0.113		_AMSTTSISSPQPGK(gl)LR_
DBNL	Phosphorylation	S283	-0.388	0.222	_LRS(ph)PFLQK_
DBNL	Phosphorylation	T291	0.823	-0.150	_QLT(ph)QPETHFGR_
HNRNPK	Ubiquitylation	K34	-0.398	0.033	_RPAEDMEEEQAFK(gl)R_
HNRNPK	Ubiquitylation	K52	1.081	1.257	_ILLQSK(gl)NAGAVIGK_
HNRNPK	Ubiquitylation	K60	0.068		_NAGAVIGK(gl)GGK(gl)NIK_
HNRNPK	Ubiquitylation	K63	-0.065	0.839	_NAGAVIGK(gl)GGK(gl)NIK_
HNRNPK	Phosphorylation	S116	0.499	0.377	_IIPTLEEGLQLPS(ph)PTATSQLPLESDAVECLNYQHYK_
HNRNPK	Phosphorylation	T118	0.679		_KIIPTLEEGLQLPSPT(ph)ATSQLPLESDAVECLNYQHYK_
HNRNPK	Phosphorylation	T120		0.365	_IIPTLEEGLQLPSPTAT(ph)SQLPLESDAVECLNYQHYK_
HNRNPK	Ubiquitylation	K163	0.329		_LLIHQSLAGGIIGVK(gl)GAK_
HNRNPK	Ubiquitylation	K179	-0.020	-0.161	_ENTQTTIK(gl)LFQECCPHSTDR_
HNRNPK	Ubiquitylation	K198	-0.013	0.077	_VVLIGGK(gl)PDR_
HNRNPK	Phosphorylation	S216	0.474	0.302	_IILDLISES(ph)PIK_
HNRNPK	Ubiquitylation	K219	-0.125	0.098	_IILDLISESPIK(gl)GR_
HNRNPK	Phosphorylation	S284	0.141	-0.133	_RDYDDMS(ph)PR_
HNRNPK	Phosphorylation	S379	-0.481	0.342	_GS(ph)YGDLGGPIITTQVTIPK_
HNRNPK	Ubiquitylation	K405	0.830	0.378	_DLAGSIIGK(gl)GGQR_
PTPN12	Phosphorylation	S571	-1.186	-0.973	_TVSLTPS(ph)PTTQVETPDLVDHDNTSPLFR_
PTPN12	Phosphorylation	S588	-1.129	-1.279	_TVSLTPSPTTQVETPDLVDHDNTS(ph)PLFR_
PTPN12	Phosphorylation	S673	-0.767	-0.786	_DVDVSEDS(ph)PPPLPER_
RHOU	Ubiquitylation	K248	-0.507		_NLSK(gl)SWWK_
SH3GL1	Ubiquitylation	K7		-0.268	_(ac)SVAGLK(gl)K_
SH3GL1	Ubiquitylation	K8	-0.654		_(ac)SVAGLKK(gl)_
SH3GL1	Ubiquitylation	K76	-0.032	1.606	_LTMLNTVSK(gl)IR_
SH3GL1	Ubiquitylation	K177	-0.477	0.450	_QGK(gl)IPDEELR_
SH3GL1	Phosphorylation	S287	-0.011	0.143	_IAASS(ph)SFR_
SH3GL1	Phosphorylation	S288	0.348	-0.194	_IAASSS(ph)FR_
SH3PXD2A	Ubiquitylation	K282	0.122		_YVTVQPYTSQSK(gl)DEIGFEK_
SH3PXD2A	Phosphorylation	S421	0.568	0.137	_AQISS(ph)PNLR_
SH3PXD2A	Phosphorylation	S515		0.383	_RTS(ph)TLTRPK_
SH3PXD2B	Phosphorylation	S770		-3.158	_KTSS(ph)SSRPLPEVR_
SVIL	Phosphorylation	S245	0.066	0.019	_DSSFTEVPRS(ph)PK_
SVIL	Phosphorylation	S263		-0.874	_SPS(ph)FGDPQLS(ph)PEAR_
SVIL	Phosphorylation	S270		-0.874	_SPS(ph)FGDPQLS(ph)PEAR_
SVIL	Ubiquitylation	K697		0.800	_LSVAAK(gl)R_
SVIL	Phosphorylation	S707	0.430	0.681	_EM(ox)EKS(ph)FDEQNVPK_
SVIL	Phosphorylation	S769	0.192	0.347	_LPS(ph)PTVAR_
SVIL	Phosphorylation	S913	0.231	0.034	_FSS(ph)SIENSDSPVR_
SVIL	Phosphorylation	S914	0.522	0.237	_FSSS(ph)IENSDSPVR_
SVIL	Phosphorylation	S968	0.381	0.329	_YGS(ph)FEEAEASYPILNR_
SVIL	Phosphorylation	S1120	-1.875		_TPTGEGLLDS(ph)PSK_
SVIL	Phosphorylation	S1122	-0.368		_TPTGEGLLDSPS(ph)K_
TPM3	Ubiquitylation	K11	0.368	1.125	_(ac)AGITTIEAVK(gl)R_
TPM3	Ubiquitylation	K116	-0.031		_MELQEIQLKEAK(gl)_
TPM3	Ubiquitylation	K223	0.612		_TIDDLEDK(gl)LK_
TPM3	Ubiquitylation	K225	0.564		_TIDDLEDKLK(gl)CTK_
TPM3	Ubiquitylation	K228	1.242	0.668	_CTK(gl)EEHLCTQR_
TPM4	Ubiquitylation	K11	0.368	1.125	_(ac)AGITTIEAVK(gl)R_
TPM4	Ubiquitylation	K116	-0.031		_MELQEIQLKEAK(gl)_
TPM4	Ubiquitylation	K223	0.612		_TIDDLEDK(gl)LK_
TPM4	Ubiquitylation	K225	0.564		_TIDDLEDKLK(gl)CTK_
TPM4	Ubiquitylation	K228	1.242	0.668	_CTK(gl)EEHLCTQR_
VCAM1	Ubiquitylation	K263	0.419	-0.113	_STLQIGK(gl)R_
VCAM1	Phosphorylation	S276		0.013	_RDANSSFFDNSSS(ph)PHLLDQLK_
VCAM1	Ubiquitylation	K293		-0.460	_NK(gl)INELELR_
VCAM1	Ubiquitylation	K326		-0.856	_FQELQLQLEKAK(gl)_
VCAM1	Ubiquitylation	K513		-1.965	_NIK(gl)QCLNQSQNFAEEMK_
VCAM1	Ubiquitylation	K555	-0.739	-0.237	_INQQENSLTLEK(gl)LK_
VCAM1	Ubiquitylation	K606		0.112	_ALLSALELKK(gl)_
VCAM1	Ubiquitylation	K657	-0.600	0.172	_TQQIK(gl)SHEYNER_
VCAM1	Ubiquitylation	K689		-0.011	_NLHNVLDSK(gl)SVEVETQK_
VCAM1	Ubiquitylation	K770	-1.636	-0.056	_SK(gl)DASLVTNEDHQR_
VCAM1	Ubiquitylation	K823	-1.207	-0.686	_LEADQSPK(gl)NSAILQNR_
VCAM1	Phosphorylation	S834		1.282	_VDS(ph)LEFSLESQK_
VCAM1	Ubiquitylation	K1022	-0.770		_SISELSDQYKQEK(gl)_
VCAM1	Phosphorylation	S1255		2.400	_GDLETSNLQDMQS(ph)QEISGLKDCEIDAEEK_
VCAM1	Phosphorylation	S1747		-0.145	_LQLQGLDLS(ph)SR_
VCAM1	Phosphorylation	S1750	-1.171	-0.117	_S(ph)LLGIDTEDAIQGR_
VCAM1	Phosphorylation	T1825		-0.475	_ITETGAVKPTGECSGEQSPDT(ph)NYEPPGEDK_
VCAM1	Ubiquitylation	K2069	-0.699		_GELDTMSKK(gl)_
VCAM1	Ubiquitylation	K2713		0.058	_MTAK(gl)ETELQR_
VCAM1	Ubiquitylation	K2739	-1.524		_TAELQEELSGEK(gl)NR_
VCAM1	Phosphorylation	S2996	-1.047	-1.005	_GS(ph)PLLGPVVPGPS(ph)PIPSVTEK_
VCAM1	Phosphorylation	S3007	-0.910	-2.059	_GS(ph)PLLGPVVPGPS(ph)PIPSVTEK_
VCAM1	Phosphorylation	S3119	-0.975	-0.328	_LALS(ph)PLSLGK_
VCAM1	Phosphorylation	S3150	1.391	1.078	_VAQRS(ph)PVDSGTILR_
VCAM1	Phosphorylation	S3175	1.052	0.884	_SVPVNNLPERS(ph)PTDSPR_
WDR1	Ubiquitylation	K423	-0.583	-0.863	_DYSGQGVVK(gl)LDVQPK_