RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
DICER1	1	-0.810	0.800	1.748			-0.207	-0.634
PPP2R1A	1	-0.260	-0.200		0.714	0.973
PPP2R1A	1	-0.260	-0.200	-0.003			-0.196	0.057
PPP2R1A	1	-0.260	-0.200		1.697	1.450	-1.553
PPP2R1B	1	1.240	-0.730		1.697	1.450	-1.553
PTBP3	1	0.070	0.580		-1.751	2.950	-0.957	0.095
RAF1	1	2.020	-1.230
FGFR1	0	0.210	0.150
GLI3	0	-0.980	1.650
BIRC2	0	-0.730	0.440
BIRC2	0	-0.730	0.440
PPP2CA	0	0.160	-0.540	0.194			0.044	0.215
PPP2CA	0	0.160	-0.540		0.650	1.189
STK25	0	1.220	-0.770				-0.371	0.364
STK25	0	1.220	-0.770	-0.052
SIK1	0	0.130	-0.480
FADS1	0	-0.870	0.300
KLK6	0	-0.160	-0.280
CTNNB1	0	0.490	-0.230
CTNNB1	0	0.490	-0.230	-0.415			0.628	0.215
POU3F2	0	-0.280	0.600
POU3F2	0	-0.280	0.600

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
BIRC2	Ubiquitylation	K15	-0.259	0.307	_(ac)MEDSTILSDWTNSNK(gl)QK_
BIRC2	Ubiquitylation	K17	-0.259	0.307	_(ac)MEDSTILSDWTNSNK(gl)QK_
BIRC2	Ubiquitylation	K38	-0.069		_SIMEDSTILSDWTNSNKQK(gl)_
BIRC2	Ubiquitylation	K102		-1.755	_LGDSPIQK(gl)HK_
BIRC2	Ubiquitylation	K233	-0.511		_LSNWEPK(gl)DDAMSEHR_
BIRC2	Ubiquitylation	K410		0.878	_DLVK(gl)QTVQSK_
BIRC2	Ubiquitylation	K490	0.305	0.534	_ANVINK(gl)QEHDIIK_
BIRC2	Ubiquitylation	K497	-1.934		_ANVINKQEHDIIK(gl)QK_
CTNNB1	Ubiquitylation	K158		-1.265	_AIPELTK(gl)LLNDEDQVVVNK_
CTNNB1	Ubiquitylation	K180	-0.546	-0.636	_AAVM(ox)VHQLSK(gl)K_
CTNNB1	Ubiquitylation	K181	-0.717	-0.729	_AAVMVHQLSKK(gl)_
CTNNB1	Phosphorylation	S191	-0.024	0.129	_S(ph)PQMVSAIVR_
CTNNB1	Ubiquitylation	K435		-0.350	_NK(gl)MM(ox)VCQVGGIEALVR_
CTNNB1	Ubiquitylation	K496		-1.262	_LHYGLPVVVK(gl)_
CTNNB1	Phosphorylation	S552	1.233	1.224	_RTS(ph)MGGTQQQFVEGVR_
CTNNB1	Phosphorylation	T556	1.275	0.995	_RTSM(ox)GGT(ph)QQQFVEGVR_
CTNNB1	Ubiquitylation	K671	-0.941	-0.934	_MSEDKPQDYK(gl)K_
FADS1	Ubiquitylation	K106		0.142	_NK(gl)ELTDEFR_
FADS1	Ubiquitylation	K251		1.457	_ILSVELGK(gl)QK_
FGFR1	Ubiquitylation	K510	1.047	-0.221	_VTK(gl)VAVK_
GLI3	Phosphorylation	S664	-0.582	-0.252	_S(ph)PGRPTQGALGEQQDLSNTTSK_
POU3F2	Phosphorylation	S341	0.357	0.518	_WLEEADSSSGS(ph)PTSIDK_
POU3F2	Ubiquitylation	K377	0.051	-0.035	_LK(gl)PLLNK_
PPP2CA	Ubiquitylation	K4	-0.788	-0.378	_(ac)MDDK(gl)AFTK_
PPP2CA	Ubiquitylation	K4	-0.450	-0.016	_(ac)M(ox)DEK(gl)VFTK_
PPP2CA	Ubiquitylation	K8	-0.522		_VFTK(gl)ELDQWIEQLNECK_
PPP2CA	Ubiquitylation	K21	-1.370		_ELDQWVEQLNECK(gl)QLNENQVR_
PPP2CA	Ubiquitylation	K21	-1.106		_ELDQWIEQLNECK(gl)QLSESQVK_
PPP2CA	Ubiquitylation	K29	0.211	0.122	_QLSESQVK(gl)SLCEK_
PPP2CA	Ubiquitylation	K36	-0.455	0.187	_AK(gl)EILTK_
PPP2CA	Ubiquitylation	K36	-0.455	0.187	_AK(gl)EILTK_
PPP2CA	Ubiquitylation	K41	-0.049	0.003	_EILTK(gl)ESNVQEVR_
PPP2CA	Ubiquitylation	K74	-0.316	-0.316	_IGGK(gl)SPDTNYLFMGDYVDR_
PPP2R1A	Ubiquitylation	K34	0.304		_K(gl)LSTIALALGVER_
PPP2R1A	Ubiquitylation	K107	0.584	0.441	_DK(gl)AVESLR_
PPP2R1A	Ubiquitylation	K163	0.106	0.149	_VSSAVK(gl)AELR_
PPP2R1A	Ubiquitylation	K175		-0.351	_ASNAVK(gl)AEIR_
PPP2R1A	Ubiquitylation	K188	0.395	0.130	_AAASK(gl)LGEFAK_
PPP2R1A	Ubiquitylation	K255	0.301	0.202	_QAAEDK(gl)SWR_
PPP2R1A	Ubiquitylation	K266	0.464	0.338	_YMVADK(gl)FTELQK_
PPP2R1A	Ubiquitylation	K284		-0.575	_FSELQK(gl)AMGPK_
PPP2R1A	Ubiquitylation	K307	0.224	0.500	_VK(gl)EFCENLSADCR_
PPP2R1A	Ubiquitylation	K467		0.890	_EAATSNLK(gl)K_
PPP2R1A	Ubiquitylation	K468		0.890	_EAATSNLK(gl)K_
PPP2R1A	Ubiquitylation	K542		-0.187	_FNVAK(gl)SLQK_
PPP2R1B	Ubiquitylation	K175		-0.351	_ASNAVK(gl)AEIR_
PPP2R1B	Ubiquitylation	K284		-0.575	_FSELQK(gl)AMGPK_
PTBP3	Phosphorylation	S56	-0.802	-0.313	_RDRPPCS(ph)PSR_
PTBP3	Ubiquitylation	K137	0.374	-0.013	_ELK(gl)TDNLPNQAR_
PTBP3	Ubiquitylation	K423	-0.297		_LYGK(gl)VLR_
PTBP3	Ubiquitylation	K431	0.177		_ATLSK(gl)HQAVQLPR_
RAF1	Phosphorylation	S29	0.028	-0.571	_DAVFDGSSCIS(ph)PTIVQQFGYQR_
RAF1	Phosphorylation	T31	0.028	-0.669	_DAVFDGSSCIS(ph)PTIVQQFGYQR_
RAF1	Phosphorylation	S244		0.053	_YSTPHAFTFNTSS(ph)PSSEGSLSQR_
RAF1	Phosphorylation	S259	-0.069	0.054	_STS(ph)TPNVHM(ox)VSTTLPVDSR_
RAF1	Phosphorylation	S301		-0.651	_SHSESASPSALSSSPNNLS(ph)PTGWSQPK_
RAF1	Phosphorylation	T303		-0.664	_SHSESASPSALSSSPNNLSPT(ph)GWSQPK_
RAF1	Phosphorylation	S497		-0.449	_SRWS(ph)GSQQVEQPTGSVLWMAPEVIR_
RAF1	Phosphorylation	S621	0.212	0.271	_SAS(ph)EPSLHR_
RAF1	Phosphorylation	S642	-0.197	0.463	_AAHTEDINACTLTTS(ph)PR_
SIK1	Phosphorylation	S435		-0.305	_PVS(ph)PSSLLDTAISEEAR_
STK25	Phosphorylation	S4	0.269	0.161	_(ac)AHS(ph)PVAVQVPGMQNNIADPEELFTK_
STK25	Ubiquitylation	K162	-0.327	0.155	_GLDYLHSEKK(gl)_
STK25	Ubiquitylation	K197	-0.399	0.038	_LADFGVAGQLTDTQIK(gl)R_
STK25	Ubiquitylation	K255	-0.986		_VLFLIPK(gl)NNPPTLVGDFTK_
STK25	Ubiquitylation	K298	0.008	-0.419	_FIVK(gl)NSK_
STK25	Ubiquitylation	K302	-0.101	0.068	_K(gl)TSYLTELIDR_
STK25	Ubiquitylation	K420	-0.470		_SIAVAEAACPGITDK(gl)MVK_
STK25	Ubiquitylation	K423	-0.470	-0.024	_SIAVAEAACPGITDKMVK(gl)_