RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
JUN	3	-0.930	0.930			-0.126
CTNND2	2	-1.450	2.770				1.061	0.147
FYN	1	1.080	-1.100
FYN	1	1.080	-1.100
COMT	1	-2.310	4.960				0.523	0.939
AAAS	1	-1.570	2.880
AAAS	1	-1.570	2.880	-0.236			0.242	0.183
DLG4	1	-0.020	0.320	1.552			0.102	0.488
HTT	1	-0.200	-0.360	0.632			0.847	0.550
ARC	1	0.350	-0.540
VDAC1	1	-1.570	2.490		1.900	-1.029
VDAC1	1	-1.570	2.490	0.739
PRKAR2B	0	-0.290	0.380
PPP3CB	0	-1.240	2.140		-0.298	1.130
PPP3CB	0	-1.240	2.140				0.923	0.537
CHST10	0	0.360	-0.780
FGF13	0	1.100	-1.060
EPHB2	0	-0.630	0.780					0.221
EPHB2	0	-0.630	0.780
ATAD1	0	-1.600	2.330				-0.184	-0.183
SYNJ1	0	0.310	-0.210

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AAAS	Ubiquitylation	K52	0.079	0.309	_GQWINLPVLQLTK(gl)DPLK_
AAAS	Ubiquitylation	K56	-1.545	-0.959	_DPLK(gl)TPGR_
AAAS	Ubiquitylation	K189		-1.183	_VYNASSTIVPSLK(gl)HR_
AAAS	Ubiquitylation	K416		-0.747	_LAVLMK(gl)GK(gl)PR_
AAAS	Ubiquitylation	K418		-0.364	_LAVLMK(gl)GK(gl)PR_
AAAS	Ubiquitylation	K425		-0.805	_VQDGK(gl)PVILLFR_
ARC	Ubiquitylation	K70	-2.090	-2.396	_SVGK(gl)LESNLDGYVPTSDSQR_
ARC	Ubiquitylation	K92		-1.864	_SIK(gl)ACLCR_
ARC	Ubiquitylation	K269		3.154	_NWVEFKK(gl)_
ATAD1	Ubiquitylation	K65		-0.245	_QIGVK(gl)NVK_
ATAD1	Ubiquitylation	K144		0.074	_TLIAK(gl)ATAK_
ATAD1	Ubiquitylation	K263	0.156	-0.080	_FHINQPALK(gl)QR_
ATAD1	Ubiquitylation	K274	0.570	0.005	_LILK(gl)NENVDR_
CHST10	Ubiquitylation	K225		-0.738	_LSSFSDAEIQK(gl)R_
COMT	Ubiquitylation	K159	-0.475	0.002	_MVDFAGVK(gl)DK_
COMT	Ubiquitylation	K161	-0.475	0.002	_MVDFAGVK(gl)DK_
CTNND2	Phosphorylation	S75	0.390	-0.006	_LGAES(ph)PSIASTSSTEK_
CTNND2	Phosphorylation	S221	-0.272	-0.602	_AQS(ph)PSYVISTGVS(ph)PSR_
CTNND2	Phosphorylation	S231	-0.562	-0.103	_AQS(ph)PSYVISTGVS(ph)PSR_
CTNND2	Phosphorylation	S273	-0.230	-0.252	_AAS(ph)PYSQRPAS(ph)PTAIR_
CTNND2	Phosphorylation	S276	-0.230	0.429	_AAS(ph)PYS(ph)QRPASPTAIR_
CTNND2	Phosphorylation	S281	0.155	0.243	_AAS(ph)PYSQRPAS(ph)PTAIR_
CTNND2	Phosphorylation	S314	0.714	0.627	_VGS(ph)PLTLTDAQTR_
CTNND2	Phosphorylation	S327	0.346	0.137	_VAS(ph)PSQGQVGS(ph)SSPK_
CTNND2	Phosphorylation	S336	0.308	0.260	_VASPSQGQVGSS(ph)SPKR_
CTNND2	Phosphorylation	S337	0.059	-0.044	_VAS(ph)PSQGQVGSSS(ph)PK_
CTNND2	Phosphorylation	S406	0.873	0.653	_SAVS(ph)PDLHITPIYEGR_
CTNND2	Phosphorylation	S447	0.245	0.506	_TGS(ph)VGIGNLQR_
CTNND2	Ubiquitylation	K518	-1.745	-1.024	_SPSIDSIQK(gl)DPR_
CTNND2	Phosphorylation	S776		1.519	_LLGLNELDDLLGKES(ph)PSKDSEPSCWGK_
DLG4	Phosphorylation	S102	-1.455		_SKPSEPIQPVNTWEISSLPSSTVTSETLPSSLS(ph)PSVEK_
DLG4	Phosphorylation	T115	-0.707	-1.378	_YQDEDT(ph)PPQEHISPQITNEVIGPELVHVSEK_
DLG4	Phosphorylation	S122		-1.073	_YQDEDTPPQEHIS(ph)PQITNEVIGPELVHVSEK_
DLG4	Phosphorylation	S158		0.773	_NLSEIENVHGFVSHSHIS(ph)PIK_
DLG4	Ubiquitylation	K321	1.264	1.435	_IMEIK(gl)LIK_
DLG4	Ubiquitylation	K361	0.180		_IIEGGAAHK(gl)DGK_
DLG4	Ubiquitylation	K452	-0.704		_YSPVSK(gl)AVLGDDEITREPR_
DLG4	Ubiquitylation	K556	0.105		_FEAK(gl)IHDLR_
DLG4	Phosphorylation	S573	0.697		_EQM(ox)M(ox)NSSISSGS(ph)GSLR_
DLG4	Phosphorylation	S575	0.255	0.729	_EQMMNSSISSGSGS(ph)LR_
DLG4	Ubiquitylation	K843	1.259		_SMENIMEMNK(gl)R_
EPHB2	Ubiquitylation	K578	-0.752	-0.618	_QSPEDVYFSK(gl)SEQLKPLK_
EPHB2	Ubiquitylation	K583	0.445	0.124	_SEQLK(gl)PLK_
EPHB2	Ubiquitylation	K617	0.339		_QK(gl)VIGAGEFGEVYK_
EPHB2	Ubiquitylation	K649	-1.219		_TLK(gl)AGYTEK_
EPHB2	Phosphorylation	S776	-0.147	-0.171	_FLEDDTS(ph)DPTYTSALGGK_
EPHB2	Phosphorylation	S897		0.000	_LPS(ph)TSGSEGVPFR_
EPHB2	Phosphorylation	T898	-0.329	0.424	_LPST(ph)SGSEGVPFR_
FGF13	Ubiquitylation	K57	-0.429	0.063	_AK(gl)CHEIFCCPLK_
FGF13	Phosphorylation	S224	0.090	0.488	_VAMYKEPS(ph)LHDLTEFSR_
FYN	Ubiquitylation	K13	0.286		_DKEATK(gl)LTEER_
FYN	Phosphorylation	S21	0.373	0.731	_DGS(ph)LNQSSGYR_
FYN	Ubiquitylation	K259		0.921	_LTDLSVK(gl)TK_
FYN	Ubiquitylation	K261	0.099		_LTDLSVKTK(gl)_
FYN	Ubiquitylation	K273	6.025		_SLCLEKK(gl)_
FYN	Ubiquitylation	K275	-0.521		_ESLQLIK(gl)R_
HTT	Ubiquitylation	K260		-0.128	_AFIANLK(gl)_
HTT	Phosphorylation	S419	0.595	0.531	_SGS(ph)IVELIAGGGSSCS(ph)PVLSR_
HTT	Phosphorylation	S430	0.402	0.494	_SGSIVELIAGGGSS(ph)CSPVLSR_
HTT	Phosphorylation	S432	0.317	0.640	_SGSIVELIAGGGSSCS(ph)PVLSR_
HTT	Phosphorylation	S1195	-0.222	0.264	_EKEPGEQAS(ph)VPLSPK_
HTT	Phosphorylation	S1199	-0.456	-0.970	_GKEKEPGEQASVPLS(ph)PK_
HTT	Ubiquitylation	K1402	0.169	-0.538	_VSTQLK(gl)TNLTSVTK_
HTT	Phosphorylation	S1874	1.994	1.028	_LLSPQMS(ph)GEEEDSDLAAK_
JUN	Phosphorylation	S58	-0.167	-1.247	_AKNS(ph)DLLTSPDVGLLK_
JUN	Phosphorylation	T62	2.545	1.674	_NSDLLT(ph)SPDVGLLK_
JUN	Phosphorylation	S63	2.030	1.458	_NSDLLTS(ph)PDVGLLK_
JUN	Ubiquitylation	K70	9.213		_NSDLLTSPDVGLLK(gl)_
JUN	Phosphorylation	S73	1.499	0.845	_LAS(ph)PELER_
JUN	Phosphorylation	S243	-0.642	-1.399	_LQALKEEPQTVPEMPGETPPLS(ph)PIDMESQER_
JUN	Ubiquitylation	K309	1.034	0.155	_EQVAQLK(gl)QK_
PPP3CB	Ubiquitylation	K32	-0.137		_LTAK(gl)EVFDNDGKPR_
PPP3CB	Ubiquitylation	K56		0.132	_VDVLK(gl)NHLVK_
PPP3CB	Ubiquitylation	K323		0.705	_AAVLK(gl)YENNVMNIR_
PPP3CB	Ubiquitylation	K405		0.078	_AIGK(gl)MAR_
PRKAR2B	Phosphorylation	T69		-0.367	_TWGDLGAAAGGGT(ph)PSK_
PRKAR2B	Phosphorylation	S114	0.366	0.525	_RAS(ph)VCAEAYNPDEEEDDAESR_
PRKAR2B	Ubiquitylation	K359	0.640		_GQYFGELALVTNK(gl)PR_
SYNJ1	Phosphorylation	T1220	-0.313	-0.087	_ASAGRLT(ph)PESQSK_
SYNJ1	Phosphorylation	S1391	-1.402	-0.873	_S(ph)SPNPFITGLTR_
SYNJ1	Phosphorylation	S1392	-0.543	-0.378	_SS(ph)PNPFITGLTR_
SYNJ1	Phosphorylation	S1565	0.717	0.918	_AS(ph)PTLDFTER_
VDAC1	Ubiquitylation	K20	0.718	0.885	_DVFTK(gl)GYGFGLIK_
VDAC1	Ubiquitylation	K61		1.135	_VTGSLETK(gl)YR_
VDAC1	Phosphorylation	S102	0.928	0.928	_LTFDSS(ph)FSPNTGKK_
VDAC1	Phosphorylation	S104	0.569	0.615	_LTFDSSFS(ph)PNTGK_
VDAC1	Phosphorylation	T107		0.493	_LTFDSSFSPNT(ph)GKK_
VDAC1	Ubiquitylation	K109	0.352		_LTFDSSFSPNTGK(gl)K_
VDAC1	Ubiquitylation	K110	0.406	0.270	_LTFDSSFSPNTGKK(gl)_
VDAC1	Ubiquitylation	K274	0.839		_NVNAGGHK(gl)LGLGLEFQA_