RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
UBE3A	2	-0.310	-0.470
CTNNA1	1	-0.520	1.660		-0.690	-1.164
CTNNA1	1	-0.520	1.660	0.139			0.436	0.323
FOXC1	1	-2.160	3.640	-1.217	-0.424	0.659
PCYT1B	1	0.580	-0.120				1.645	1.375
PCYT1B	1	0.580	-0.120
ZFX	0	-0.670	0.680	-0.103			1.047	0.485
BAX	0	1.590	-1.170				0.811	0.359
EIF2B4	0	-0.600	0.760	-1.449			-0.595	0.243
EIF2B2	0	-0.010	0.410
KDR	0	0.860	-0.680
TAF4	0			0.967	0.295	0.068	1.083	0.605
SOD1	0	1.450	-1.250
EIF2B5	0	-0.630	0.250	-0.711			0.154	-0.822
BCL2L1	0
BCL2	0	0.910	-0.740
IMMP2L	0	0.650	-0.270
FANCG	0	0.390	-0.740		0.107	0.986

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
BAX	Ubiquitylation	K57		-1.174	_MGGEAPELALDPVPQDASTK(gl)K_
BAX	Ubiquitylation	K58	-1.718	-1.174	_MGGEAPELALDPVPQDASTKK(gl)_
BAX	Ubiquitylation	K64	0.708	1.306	_LSECLK(gl)R_
BCL2	Ubiquitylation	K22	1.480		_YIHYK(gl)LSQR_
BCL2L1	Ubiquitylation	K87	0.026		_EVIPMAAVK(gl)QALR_
CTNNA1	Ubiquitylation	K16	-0.194	-0.141	_WDPK(gl)SLEIR_
CTNNA1	Ubiquitylation	K45	-1.131	-0.728	_LLEPLVTQVTTLVNTNSK(gl)GPSNK_
CTNNA1	Ubiquitylation	K120		-0.333	_AAAGEFADDPCSSVK(gl)R_
CTNNA1	Ubiquitylation	K414	0.977		_NGNEK(gl)EVKEYAQVFR_
CTNNA1	Ubiquitylation	K417	0.211		_NGNEK(gl)EVKEYAQVFR_
CTNNA1	Phosphorylation	S641	-0.056	0.089	_TPEELDDS(ph)DFETEDFDVR_
CTNNA1	Phosphorylation	T654	0.808	0.392	_SRT(ph)SVQTEDDQLIAGQSAR_
CTNNA1	Phosphorylation	S655	1.043	0.882	_SRTS(ph)VQTEDDQLIAGQSAR_
CTNNA1	Ubiquitylation	K683	3.760	-0.837	_AIMAQLPQEQKAK(gl)_
CTNNA1	Ubiquitylation	K747		-0.384	_NTSDVISAAK(gl)K_
CTNNA1	Ubiquitylation	K748	-0.083	-0.384	_NTSDVISAAKK(gl)_
EIF2B2	Ubiquitylation	K7	-0.071		_PGSAAK(gl)GSELSER_
EIF2B4	Phosphorylation	S21	1.059		_SLS(ph)GSLCALFSDADSGSGM(ox)K_
EIF2B4	Phosphorylation	S151	-1.351	-1.042	_KGEQGGPPPKAS(ph)PSTAGETPSGVK_
EIF2B5	Phosphorylation	S544	0.200	0.349	_GGS(ph)PQM(ox)DDIK_
FANCG	Ubiquitylation	K28		-0.599	_QAK(gl)VAQNSGLTLR_
FANCG	Ubiquitylation	K504		-1.806	_ATPEEKEQGAAFNCEQGCK(gl)SDAALQQLR_
FOXC1	Phosphorylation	S6	0.325	0.055	_YS(ph)VSSPNSLGVVPYLGGEQSYYR_
FOXC1	Phosphorylation	S235		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXC1	Phosphorylation	S241		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXC1	Phosphorylation	S259	-0.376	-0.198	_IES(ph)PDSSSSSLSSGSSPPGSLPSAR_
FOXC1	Phosphorylation	S320	0.313	0.178	_GS(ph)PQSAAAELSSGLLASAAASSR_
FOXC1	Phosphorylation	S323		0.347	_GSPQS(ph)AAAELSSGLLASAAASSR_
FOXC1	Ubiquitylation	K554	-0.030	0.013	_TSGAFVYDCSK(gl)F_
IMMP2L	Ubiquitylation	K83		-1.186	_GDIVSLVSPK(gl)NPEQK_
KDR	Ubiquitylation	K1064		-1.119	_DIYK(gl)DPDYVR_
PCYT1B	Ubiquitylation	K228		0.196	_GYTAK(gl)ELNVSFINEK_
PCYT1B	Phosphorylation	S315	-0.223	0.319	_MLQALS(ph)PK_
SOD1	Ubiquitylation	K4	-0.329		_(ac)ATK(gl)AVCVLK_
SOD1	Ubiquitylation	K10	0.211	0.582	_AVCVLK(gl)GDGPVQGIINFEQK_
SOD1	Ubiquitylation	K24	-0.435	-0.086	_GDGPVQGIINFEQK(gl)ESNGPVK_
SOD1	Ubiquitylation	K31	-0.109	0.332	_ESNGPVK(gl)VWGSIK_
SOD1	Phosphorylation	S99		0.405	_HVGDLGNVTADKDGVADVS(ph)IEDSVISLSGDHCIIGR_
SOD1	Ubiquitylation	K123	0.352	0.004	_TLVVHEK(gl)ADDLGK_
SOD1	Ubiquitylation	K129	0.143		_ADDLGK(gl)GGNEESTK_
SOD1	Ubiquitylation	K137	0.464	0.934	_ADDLGKGGNEESTK(gl)TGNAGSR_
UBE3A	Ubiquitylation	K77	0.131	0.538	_ALELYK(gl)INAK_
UBE3A	Ubiquitylation	K89	-0.782		_LCDPHPSK(gl)K_
UBE3A	Ubiquitylation	K90	-0.804		_LCDPHPSKK(gl)_
UBE3A	Ubiquitylation	K112	-0.670		_GAPNNSCSEIK(gl)MNKK_
UBE3A	Ubiquitylation	K123	0.184		_IDFK(gl)DVTYLTEEK_
UBE3A	Phosphorylation	S218	3.592	3.254	_IGDSS(ph)QGDNNLQK_
UBE3A	Ubiquitylation	K315		-0.507	_AMSK(gl)LPLAAQGK_
UBE3A	Ubiquitylation	K323		-0.547	_LPLAAQGK(gl)LIR_
UBE3A	Ubiquitylation	K373	1.085	1.052	_NLVNDDDAIVAASK(gl)CLK_
UBE3A	Ubiquitylation	K552	-0.235	0.125	_LEMIAMENPADLK(gl)K_
UBE3A	Ubiquitylation	K553	-0.235	0.125	_LEMIAMENPADLK(gl)K_
UBE3A	Ubiquitylation	K824		0.226	_LK(gl)MIIAK_
ZFX	Phosphorylation	S313	-0.303	-0.112	_ADPGEDDLGGTVDIVES(ph)EPENDHGVELLDQNSSIR_