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Query: VAMP7

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
VAMP7 0 2.490 0.400 0.320 0.660 -0.175

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
VAMP7 Ubiquitylation K125 0.653 1.311 _GLDK(gl)VMETQAQVDELK_
VAMP7 Ubiquitylation K137 0.694 1.092 _VMETQAQVDELK(gl)GIMVR_
VAMP7 Ubiquitylation K172 0.306 _TENLVDSSVTFK(gl)TTSR_

Background Information for VAMP7:


Pubmed-VAMP7 »
Uniprot-VAMP7 »
Biogrid-VAMP7 »
ProteomicsDB-VAMP7 »

Tumorportal-VAMP7 »
COSMIC-VAMP7 »
GenomeRNAi-VAMP7 »
Genecards-VAMP7


Protein-protein Interactions for VAMP7
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait C6orf72 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SIRT2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNAP29 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STX12 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STX7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in VAMP7
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Longin-like_dom IPR011012 0.34
Category members Synaptobrevin IPR001388 0
Category members Longin_dom IPR010908 0


Protein complexes (CORUM database) featuring VAMP7
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 733 SNARE complex (STX4, VAMP1, VAMP7) Database 0.27


Categories featuring VAMP7
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0005789 endoplasmic reticulum membrane Database 1.57
Category members Pathway Pathway_1261 KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT 0 1.52
Category members GO Category GO:0006906 vesicle fusion Database 1.28
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members Pathway Pathway_474 REACTOME_MEMBRANE_TRAFFICKING 0 1.14
Category members GO Category GO:0016192 vesicle-mediated transport Database 1.1
Category members Pathway Pathway_475 REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING 0 0.98
Category members GO Category GO:0005765 lysosomal membrane Database 0.82
Category members Pathway Pathway_520 REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS 0 0.78
Category members GO Category GO:0006892 post-Golgi vesicle-mediated transport Database 0.74
Category members GO Category GO:0043312 neutrophil degranulation Database 0.62
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0031201 SNARE complex Database 0.49
Category members GO Category GO:0008333 endosome to lysosome transport Database 0.49
Category members GO Category GO:0043231 intracellular membrane-bounded organelle Database 0.43
Category members GO Category GO:0048471 perinuclear region of cytoplasm Database 0.39
Category members GO Category GO:0030670 phagocytic vesicle membrane Database 0.37
Category members GO Category GO:0043001 Golgi to plasma membrane protein transport Database 0.32
Category members GO Category GO:0006888 ER to Golgi vesicle-mediated transport Database 0.28
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0045335 phagocytic vesicle Database 0.16
Category members Pathway Pathway_473 REACTOME_LYSOSOME_VESICLE_BIOGENESIS 0 0.13
Category members GO Category GO:0043005 neuron projection Database 0.08
Category members GO Category GO:0045202 synapse Database 0.06
Category members GO Category GO:0019905 syntaxin binding Database 0.05
Category members GO Category GO:0048280 vesicle fusion with Golgi apparatus Database 0.04
Category members GO Category GO:0006911 phagocytosis, engulfment Database 0.03
Category members GO Category GO:0006810 transport Database 0
Category members GO Category GO:0017156 calcium ion-dependent exocytosis Database 0
Category members GO Category GO:0030054 cell junction Database 0
Category members GO Category GO:0030658 transport vesicle membrane Database 0
Category members GO Category GO:0031902 late endosome membrane Database 0
Category members GO Category GO:0034197 triglyceride transport Database 0
Category members GO Category GO:0045177 apical part of cell Database 0


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