RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
CHEK2	2	0.530	0.100
NEDD4L	0	-0.050	-0.110
CDC42	0	-0.170	0.490	-0.597			-1.527	-1.013
CDC42	0	1.240	-0.940	-0.597			-1.527	-1.013
XPO1	0	-0.520	0.800	0.240	1.064	0.205	0.673	0.522
PSMD3	0	-1.380	2.420				0.202	-0.057
PSMD3	0	-1.380	2.420	0.210	-0.098	-0.037
PPP2CA	0	0.160	-0.540	0.194			0.044	0.215
PPP2CA	0	0.160	-0.540		0.650	1.189
MDM2	0	-0.210	0.080
FURIN	0	1.280	-0.730
PSMD1	0				-0.187	0.210	0.132	0.264
PSMD1	0			0.184
UBXN2A	0	0.000	0.120
PSMD2	0			0.043	-0.332	0.296	0.138	-0.015
FAF1	0	0.870	-0.650	0.213
HGS	0	0.020	0.300	-0.211			0.737	0.264

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CDC42	Ubiquitylation	K173	-1.839		_DDPSTIEK(gl)LAK_
CDC42	Ubiquitylation	K178	-0.801	-0.716	_NK(gl)QKPITPETAEK_
CDC42	Ubiquitylation	K180	-1.806		_QK(gl)PITPETAEK(gl)LAR_
CDC42	Ubiquitylation	K189	-1.082		_QKPITPETAEK(gl)LAR_
CDC42	Ubiquitylation	K198	0.550	1.159	_AVK(gl)YVECSALTQK_
CDC42	Ubiquitylation	K208	-0.937	0.038	_YVECSALTQK(gl)GLK_
CDC42	Ubiquitylation	K228	-2.488		_NVFDEAILAALEPPEPK(gl)K_
CDC42	Ubiquitylation	K229	-1.254		_NVFDEAILAALEPPEPKK(gl)_
CHEK2	Phosphorylation	S260	3.670	3.632	_KFAIGS(ph)AR_
CHEK2	Ubiquitylation	K437		-0.826	_TQVSLK(gl)DQITSGK_
FAF1	Ubiquitylation	K139	-0.732		_QILENELQIPVSK(gl)MLLK_
FAF1	Ubiquitylation	K143	-0.325	0.510	_MLLK(gl)GWK_
FAF1	Ubiquitylation	K146	0.008	0.988	_GWK(gl)TGDVEDSTVLK_
FAF1	Ubiquitylation	K157	-0.570	-0.411	_TGDVEDSTVLK(gl)SLHLPK_
FAF1	Ubiquitylation	K221	0.454	0.951	_EYNLNFSGSSTIQEVK(gl)R_
FAF1	Phosphorylation	T580	-0.344		_IRT(ph)PSGEFLER_
FAF1	Phosphorylation	S582	0.205	0.092	_TPS(ph)GEFLER_
FURIN	Ubiquitylation	K789	-1.074	-0.470	_TAFIK(gl)DQSAL_
HGS	Ubiquitylation	K126	0.088	0.464	_YK(gl)VVQDTYQIMK_
HGS	Ubiquitylation	K192	0.015	0.751	_ACGQIFCGK(gl)CSSK_
HGS	Ubiquitylation	K202	-0.163	0.558	_YSTIPK(gl)FGIEK_
HGS	Ubiquitylation	K207	-0.193	0.798	_FGIEK(gl)EVR_
HGS	Ubiquitylation	K283	-0.826	-0.270	_QK(gl)STYTSYPK_
HGS	Ubiquitylation	K337	0.097		_NYWEK(gl)KQEEAR_
HGS	Ubiquitylation	K473	-0.154		_LYYEGLQDK(gl)LAQIR_
HGS	Ubiquitylation	K513	-0.289		_QIQLAQK(gl)LEIMR_
HGS	Ubiquitylation	K520	0.211	1.230	_QK(gl)KQEYLEVQR_
HGS	Ubiquitylation	K521	-1.344	1.230	_K(gl)QEYLEVQR_
HGS	Ubiquitylation	K551	-0.260	0.554	_LEQQK(gl)QTVQM(ox)R_
MDM2	Phosphorylation	S166	0.576	1.068	_AIS(ph)ETEENSDELSGER_
MDM2	Ubiquitylation	K334		-0.872	_ENWLPEDK(gl)GK_
MDM2	Ubiquitylation	K336		-0.872	_ENWLPEDK(gl)GK_
MDM2	Ubiquitylation	K363		0.883	_LENSTQAEEGFDVPDCK(gl)K_
MDM2	Ubiquitylation	K364		0.883	_LENSTQAEEGFDVPDCK(gl)K_
MDM2	Ubiquitylation	K473		0.806	_NK(gl)PCPVCR_
NEDD4L	Ubiquitylation	K149	-0.001	0.036	_LK(gl)MAYMPK_
NEDD4L	Phosphorylation	T302	0.166	0.120	_T(ph)SPQELSEELSR_
NEDD4L	Phosphorylation	S303	0.166	0.120	_T(ph)SPQELSEELSR_
NEDD4L	Phosphorylation	S448	0.067	-0.137	_SLS(ph)SPTVTLSAPLEGAK_
NEDD4L	Phosphorylation	S449	-0.460	-0.435	_SLSS(ph)PTVTLSAPLEGAK_
NEDD4L	Ubiquitylation	K462	-0.635	-0.011	_SLSSPTVTLSAPLEGAK(gl)DSPVRR_
NEDD4L	Ubiquitylation	K471	-0.787		_AVK(gl)DTLSNPQSPQPSPYNSPKPQHK_
NEDD4L	Ubiquitylation	K531		0.704	_LK(gl)FPVHMR_
NEDD4L	Ubiquitylation	K539	-1.106	-1.175	_SK(gl)TSLNPNDLGPLPPGWEER_
NEDD4L	Ubiquitylation	K639	0.649	0.864	_IMSVK(gl)RPDVLK_
PPP2CA	Ubiquitylation	K4	-0.788	-0.378	_(ac)MDDK(gl)AFTK_
PPP2CA	Ubiquitylation	K4	-0.450	-0.016	_(ac)M(ox)DEK(gl)VFTK_
PPP2CA	Ubiquitylation	K8	-0.522		_VFTK(gl)ELDQWIEQLNECK_
PPP2CA	Ubiquitylation	K21	-1.370		_ELDQWVEQLNECK(gl)QLNENQVR_
PPP2CA	Ubiquitylation	K21	-1.106		_ELDQWIEQLNECK(gl)QLSESQVK_
PPP2CA	Ubiquitylation	K29	0.211	0.122	_QLSESQVK(gl)SLCEK_
PPP2CA	Ubiquitylation	K36	-0.455	0.187	_AK(gl)EILTK_
PPP2CA	Ubiquitylation	K36	-0.455	0.187	_AK(gl)EILTK_
PPP2CA	Ubiquitylation	K41	-0.049	0.003	_EILTK(gl)ESNVQEVR_
PPP2CA	Ubiquitylation	K74	-0.316	-0.316	_IGGK(gl)SPDTNYLFMGDYVDR_
PSMD1	Phosphorylation	T270	0.323	0.393	_T(ph)VGTPIASVPGSTNTGTVPGSEK_
PSMD1	Phosphorylation	T273	0.280	0.378	_TVGT(ph)PIASVPGSTNTGTVPGSEKDSDSMETEEK_
PSMD1	Ubiquitylation	K310	-1.079	-0.773	_TSSAFVGK(gl)TPEASPEPK_
PSMD1	Phosphorylation	T311	0.661	0.439	_TSSAFVGKT(ph)PEAS(ph)PEPK_
PSMD1	Phosphorylation	S315	-1.451	-0.115	_TSSAFVGKT(ph)PEAS(ph)PEPK_
PSMD1	Ubiquitylation	K324	1.017	0.838	_DQTLK(gl)MIK_
PSMD1	Ubiquitylation	K354		0.084	_NNNTDLMILK(gl)NTK_
PSMD1	Ubiquitylation	K357		0.084	_NNNTDLMILK(gl)NTK_
PSMD1	Ubiquitylation	K574	0.139		_DK(gl)DPILRR_
PSMD1	Ubiquitylation	K720	0.311	0.372	_VINDK(gl)HDDVMAK_
PSMD1	Ubiquitylation	K838	0.226		_VSTAVLSITAK(gl)AK_
PSMD1	Ubiquitylation	K840	-0.173	1.036	_VSTAVLSITAKAK(gl)_
PSMD1	Ubiquitylation	K890	-0.281	0.179	_VMPAQLK(gl)VLTMPETCR_
PSMD2	Phosphorylation	S21	-1.000	-0.678	_DKAPVQPQQS(ph)PAAAPGGTDEKPSGK_
PSMD2	Ubiquitylation	K32	-2.200	-1.091	_APVQPQQSPAAAPGGTDEK(gl)PSGK_
PSMD2	Ubiquitylation	K36	-2.226	-1.995	_APVQPQQSPAAAPGGTDEKPSGK(gl)ER_
PSMD2	Ubiquitylation	K71	-0.701		_LGEK(gl)DTSLYRPALEELR_
PSMD2	Ubiquitylation	K297	0.714		_DVVVQK(gl)QMAFMLGR_
PSMD2	Ubiquitylation	K402	0.124	0.785	_LLTDDGNK(gl)WLYK_
PSMD2	Ubiquitylation	K556		0.234	_SETELK(gl)DTYAR_
PSMD2	Ubiquitylation	K863	-0.651	-0.426	_VGQAVDVVGQAGK(gl)PK_
PSMD2	Ubiquitylation	K907	-0.089		_K(gl)NPNYDL_
PSMD3	Ubiquitylation	K38	-3.662		_AKPPPGGGEQEPPPPPAPQDVEMK(gl)EEAATGGGSTGEADGK_
PSMD3	Ubiquitylation	K84	0.341		_QLEK(gl)AVSGKEPR_
PSMD3	Ubiquitylation	K273	-0.674		_LVSK(gl)SVFPEQANNNEWAR_
PSMD3	Ubiquitylation	K296	0.726	0.732	_IK(gl)AIQLEYSEARR_
PSMD3	Ubiquitylation	K503	-0.296	-0.569	_SYNK(gl)DLESAEERR_
UBXN2A	Ubiquitylation	K50	-1.406	0.352	_VSSK(gl)CVSPAEQKK_
XPO1	Phosphorylation	S391	-0.074	0.083	_ESPFSTSAS(ph)PLLSGSQHFDVPPR_
XPO1	Ubiquitylation	K455	0.519	0.708	_DTDSINLYK(gl)NM(ox)R_
XPO1	Ubiquitylation	K531	0.402		_DLLGLCEQK(gl)R_
XPO1	Ubiquitylation	K680		-0.376	_NVDILK(gl)DPETVK_
XPO1	Ubiquitylation	K693	0.285	0.582	_QLGSILK(gl)TNVR_
XPO1	Ubiquitylation	K700	-0.104		_ACK(gl)AVGHPFVIQLGR_