bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Category

Results for the Category
cholesterol transport
(GO:0030301)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

 Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
OSBPL5 0 0.550 -0.090 -1.590 -0.451 0.036 0.268
OSBPL5 0 0.550 -0.090
SCARB1 0 0.990 -0.330
SCARB1 0 0.990 -0.330 -0.012 -0.480
APOB 0 0.130 0.050 -4.359 0.702
CAV1 0 1.150 -0.150
CAV1 0 1.150 -0.150
CAV1 0 1.150 -0.150
APOA1 0 0.850 -0.420 -3.959
VPS4B 0 -0.670 1.580
LDLR 0 0.610 -0.680 -0.328
NPC1 0 0.620 -0.700 0.275 0.103
ABCG1 0 -0.770 2.080
ARV1 0 0.640 -0.640

PTM Sites:

 Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
ABCG1 Ubiquitylation K446 -1.109 _GK(gl)VCNLVPYLR_
ARV1 Ubiquitylation K13 -1.119 -0.127 _SGLQQGK(gl)GNVDGVAATPTAASASCQYR_
ARV1 Ubiquitylation K42 0.302 _CIECNQEAK(gl)ELYR_
CAV1 Ubiquitylation K5 0.591 0.963 _(ac)SGGK(gl)YVDSEGHLYTVPIR_
CAV1 Phosphorylation S6 0.836 0.688 _(ac)ADELS(ph)EKQVYDAHTK_
CAV1 Ubiquitylation K8 0.244 0.734 _(ac)ADELSEK(gl)QVYDAHTK_
CAV1 Ubiquitylation K26 0.724 0.894 _EQGNIYK(gl)PNNK_
CAV1 Ubiquitylation K30 -0.008 0.317 _EQGNIYKPNNK(gl)AMADELSEK_
CAV1 Ubiquitylation K39 0.690 1.170 _AMADELSEK(gl)QVYDAHTK_
CAV1 Phosphorylation S76 0.607 0.527 _AMADELS(ph)EK_
CAV1 Ubiquitylation K176 -0.259 _INLQK(gl)EI_
NPC1 Ubiquitylation K1191 0.981 _AFTVSMK(gl)GSR_
OSBPL5 Phosphorylation T13 0.040 _(ac)M(ox)EGGLADGEPDRT(ph)SLLGDSKDVLGPSTVVANSDESQLLTPGK_
OSBPL5 Phosphorylation S14 0.237 0.627 _(ac)MEGGLADGEPDRTS(ph)LLGDSK_
OSBPL5 Phosphorylation T39 -0.210 _DVLGPSTVVANSDESQLLT(ph)PGK_
OSBPL5 Phosphorylation S63 -0.125 0.863 _DLHQPS(ph)LSPASPHSQGFER_
OSBPL5 Phosphorylation T64 -0.728 _DEGPPT(ph)PSSATK_
OSBPL5 Phosphorylation S65 -0.155 0.044 _DLHQPSLS(ph)PASPHSQGFER_
OSBPL5 Phosphorylation S68 -0.891 -0.231 _DLHQPSLSPAS(ph)PHSQGFER_
OSBPL5 Phosphorylation S71 0.689 _DLHQPSLSPASPHS(ph)QGFER_
OSBPL5 Phosphorylation S120 1.496 1.221 _KES(ph)LKVQK_
OSBPL5 Ubiquitylation K698 0.085 -0.077 _AINAK(gl)DQTEATQEK_
SCARB1 Ubiquitylation K480 0.325 0.520 _GSVLQEAK(gl)L_
VPS4B Phosphorylation S102 -0.658 -0.952 _EGQPSPADEKGNDS(ph)DGEGESDDPEK_


.

© Copyright Svejstrup Laboratory 2015