RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
WDR62	2
TACC2	2	0.520	-0.920
TACC1	1	-0.060	-0.800
HTT	1	-0.200	-0.360	0.632			0.847	0.550
TACC3	0	1.030	-0.910
PRDM6	0
PSEN1	0	0.930	-1.110
PHGDH	0	-0.190	-0.280	0.032	-0.024	-0.302	1.449	0.834
SMARCA4	0	-0.810	1.520	0.629	-0.158	0.141	0.337	0.333
CHAC1	0	-0.520	0.590
CDK5RAP2	0	-0.900	1.740				-0.181	0.284
PRDM16	0	-1.320	2.300		-0.189	0.565		-1.171
EPHB1	0	-0.220	0.000					0.221
EPHB1	0	-0.220	0.000	-0.042
EPHB1	0	-0.220	0.000
FOXL1	0	0.560	-0.350	-1.217	-0.424	0.659

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CDK5RAP2	Ubiquitylation	K489	-0.006		_HLTESTNQK(gl)DVLLQK_
CDK5RAP2	Phosphorylation	S697		-0.007	_LAS(ph)T(ph)EQTELLASK_
CDK5RAP2	Phosphorylation	T698		-0.007	_LAS(ph)T(ph)EQTELLASK_
CDK5RAP2	Ubiquitylation	K943		-0.252	_SRLPILIK(gl)_
CDK5RAP2	Phosphorylation	S1074	1.217	0.953	_ENPEDVLS(ph)PTSVATYLSSK_
CDK5RAP2	Phosphorylation	S1238	0.477	0.111	_DLS(ph)PPRYDSLVQSQAR_
CDK5RAP2	Phosphorylation	S1350	-1.016	-0.606	_IEEDNLTYQHLLPES(ph)PEPSASHALSDYETSEK_
CDK5RAP2	Phosphorylation	T1885		-0.869	_GNLELRPGGAHPGT(ph)CSPSRPGS_
CDK5RAP2	Phosphorylation	S1887	-0.612	-1.053	_GNLELRPGGAHPGTCS(ph)PSRPGS_
CDK5RAP2	Phosphorylation	S1889		-0.312	_GNLELRPGGAHPGTCSPS(ph)RPGS_
CHAC1	Ubiquitylation	K151	0.442	-0.540	_ALK(gl)YLNVR_
EPHB1	Ubiquitylation	K578	-0.752	-0.618	_QSPEDVYFSK(gl)SEQLKPLK_
EPHB1	Ubiquitylation	K583	0.445	0.124	_SEQLK(gl)PLK_
EPHB1	Ubiquitylation	K617	0.339		_QK(gl)VIGAGEFGEVYK_
EPHB1	Ubiquitylation	K649	-1.219		_TLK(gl)AGYTEK_
EPHB1	Ubiquitylation	K657	0.533		_LKLPGK(gl)R_
EPHB1	Phosphorylation	S897		0.000	_LPS(ph)TSGSEGVPFR_
EPHB1	Phosphorylation	T898	-0.329	0.424	_LPST(ph)SGSEGVPFR_
FOXL1	Phosphorylation	S6	0.325	0.055	_YS(ph)VSSPNSLGVVPYLGGEQSYYR_
FOXL1	Phosphorylation	S235		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXL1	Phosphorylation	S241		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXL1	Phosphorylation	S259	-0.376	-0.198	_IES(ph)PDSSSSSLSSGSSPPGSLPSAR_
FOXL1	Phosphorylation	S320	0.313	0.178	_GS(ph)PQSAAAELSSGLLASAAASSR_
FOXL1	Phosphorylation	S323		0.347	_GSPQS(ph)AAAELSSGLLASAAASSR_
FOXL1	Ubiquitylation	K554	-0.030	0.013	_TSGAFVYDCSK(gl)F_
HTT	Ubiquitylation	K260		-0.128	_AFIANLK(gl)_
HTT	Phosphorylation	S419	0.595	0.531	_SGS(ph)IVELIAGGGSSCS(ph)PVLSR_
HTT	Phosphorylation	S430	0.402	0.494	_SGSIVELIAGGGSS(ph)CSPVLSR_
HTT	Phosphorylation	S432	0.317	0.640	_SGSIVELIAGGGSSCS(ph)PVLSR_
HTT	Phosphorylation	S1195	-0.222	0.264	_EKEPGEQAS(ph)VPLSPK_
HTT	Phosphorylation	S1199	-0.456	-0.970	_GKEKEPGEQASVPLS(ph)PK_
HTT	Ubiquitylation	K1402	0.169	-0.538	_VSTQLK(gl)TNLTSVTK_
HTT	Phosphorylation	S1874	1.994	1.028	_LLSPQMS(ph)GEEEDSDLAAK_
PHGDH	Ubiquitylation	K21	0.211	0.538	_K(gl)ILQDGGLQVVEK_
PHGDH	Ubiquitylation	K58	-0.078	0.489	_SATK(gl)VTADVINAAEK_
PHGDH	Ubiquitylation	K69	0.277	0.839	_VTADVINAAEK(gl)LQVVGR_
PHGDH	Ubiquitylation	K289	-0.629	-0.819	_ALVDHENVISCPHLGASTK(gl)EAQSR_
PHGDH	Ubiquitylation	K351	-0.346	0.413	_AWAGSPK(gl)GTIQVITQGTSLK_
PHGDH	Ubiquitylation	K384	-0.129	-0.044	_EASK(gl)QADVNLVNAK_
PHGDH	Ubiquitylation	K394	-0.043		_QADVNLVNAK(gl)LLVK_
PRDM16	Phosphorylation	S62	-1.041	-0.744	_EGS(ph)PYKAPIYIPDDIPIPAEFELR_
PRDM16	Phosphorylation	S1039	-0.074	0.136	_NFIGNSNHGSQS(ph)PR_
PRDM6	Phosphorylation	S68	0.643	0.662	_AEPPPDS(ph)LRPR_
PSEN1	Phosphorylation	S313		0.844	_VSKNS(ph)KYNAESTER_
PSEN1	Ubiquitylation	K314	0.016	0.414	_NSK(gl)YNAESTER_
PSEN1	Phosphorylation	S366	-0.340	0.055	_AAVQELSS(ph)SILAGEDPEER_
PSEN1	Phosphorylation	S367	0.005	0.066	_AAVQELSSS(ph)ILAGEDPEER_
SMARCA4	Ubiquitylation	K357	-0.934		_ITPIQK(gl)PR_
SMARCA4	Ubiquitylation	K405	0.109	1.148	_ATIELK(gl)ALR_
SMARCA4	Ubiquitylation	K437	-0.317		_DTALETALNAK(gl)AYKR_
SMARCA4	Ubiquitylation	K455	0.225		_ITEK(gl)LEK_
SMARCA4	Ubiquitylation	K496		0.923	_SVTGK(gl)IQK_
SMARCA4	Phosphorylation	S677	-0.880	-0.324	_KAENAEGQTPAIGPDGEPLDETSQMS(ph)DLPVK_
SMARCA4	Ubiquitylation	K1283	0.125		_ILAAAK(gl)YK_
SMARCA4	Phosphorylation	S1413	-0.265	0.515	_EVDYSDS(ph)LTEK_
SMARCA4	Phosphorylation	S1486	-0.713	-0.935	_LS(ph)PNPPNLTK_
TACC1	Phosphorylation	S44	-0.293	-0.032	_GGAAGEDEAGGPEGDPEEEDS(ph)QAETK_
TACC1	Phosphorylation	S91	0.291	1.551	_S(ph)QESQEADEQLVAEVVEK_
TACC1	Phosphorylation	S94		1.530	_SQES(ph)QEADEQLVAEVVEK_
TACC2	Phosphorylation	S2072		0.249	_RKS(ph)TDSVPISK_
TACC2	Phosphorylation	S2226	1.598	2.720	_VQNS(ph)PPVGR_
TACC2	Phosphorylation	S2512	1.543	1.249	_FSS(ph)PTEELDYR_
TACC2	Phosphorylation	S2569	-1.730		_M(ox)SES(ph)PTPCSGSSFEETEALVNTAAK_
TACC3	Phosphorylation	S25	-0.993	-0.186	_NTENCDFLFS(ph)PPEVTGR_
TACC3	Phosphorylation	T59		-2.436	_VTFQT(ph)PLRDPQTHR_
TACC3	Phosphorylation	S71	0.876	1.139	_ILS(ph)PSMASK_
TACC3	Phosphorylation	S175	0.134	0.059	_VS(ph)GSPEQAVEENLSSYSLDR_
TACC3	Phosphorylation	S177	0.248	0.430	_VSGS(ph)PEQAVEENLSSYSLDRR_
TACC3	Phosphorylation	T228		0.779	_AETPHGAEEECKAET(ph)PHGAEEECR_
TACC3	Phosphorylation	T249	-0.679	-0.649	_HGGVCAPAAVAT(ph)SPPGAIPK_
TACC3	Phosphorylation	S250	-0.740	-0.589	_HGGVCAPAAVATS(ph)PPGAIPK_
TACC3	Phosphorylation	T315	1.424		_AM(ox)T(ph)LSPQEEVAAGQMASSSR_
TACC3	Phosphorylation	S317	1.040	1.242	_AM(ox)TLS(ph)PQEEVAAGQM(ox)ASSSR_
TACC3	Phosphorylation	S434	0.179	0.184	_SGCSEAQPPES(ph)PETR_
TACC3	Ubiquitylation	K649		-0.831	_DLDAVVK(gl)ATQEENR_
TACC3	Ubiquitylation	K819	0.067		_TK(gl)ENEELTR_
WDR62	Phosphorylation	S32	-1.724	-1.340	_RGQS(ph)SPPPAPPICLR_
WDR62	Phosphorylation	S33	-0.818	-1.182	_RGQSS(ph)PPPAPPICLR_
WDR62	Phosphorylation	S49		0.012	_TRLS(ph)TASEETVQNR_
WDR62	Phosphorylation	S1070		0.700	_HHFETLTES(ph)PCR_
WDR62	Phosphorylation	S1123	1.354	1.533	_ATQCLVKS(ph)PEVK_
WDR62	Phosphorylation	T1140	0.715	1.046	_AGT(ph)GYASPDRTHVLAAGK_
WDR62	Phosphorylation	S1144	0.823	1.189	_AGTGYAS(ph)PDRTHVLAAGK_
WDR62	Phosphorylation	S1226	-0.377	-0.367	_S(ph)ISLGDSEGPIVATLAQPLR_
WDR62	Phosphorylation	S1228	-0.358	-0.330	_SIS(ph)LGDSEGPIVATLAQPLR_
WDR62	Phosphorylation	S1248	-1.061	-1.122	_RPS(ph)SVGELASLGQELQAITTATTPSLDSEGQEPALR_
WDR62	Phosphorylation	S1249	-1.023	-1.122	_RPSS(ph)VGELASLGQELQAITTATT(ph)PSLDSEGQEPALR_
WDR62	Phosphorylation	S1255	-1.122		_RPSSVGELAS(ph)LGQELQAITTATTPSLDSEGQEPALR_
WDR62	Phosphorylation	T1268	1.841		_RPS(ph)SVGELASLGQELQAITTATT(ph)PSLDSEGQEPALR_
WDR62	Phosphorylation	S1348		-1.872	_LHGSAFRPSLPAPES(ph)PGLPAHPSNPQLPEAR_