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Query: PRDM6

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PRDM6 0 1.305

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PRDM6 Phosphorylation S68 0.643 0.662 _AEPPPDS(ph)LRPR_

Background Information for PRDM6:


Pubmed-PRDM6 »
Uniprot-PRDM6 »
Biogrid-PRDM6 »
ProteomicsDB-PRDM6 »

Tumorportal-PRDM6 »
COSMIC-PRDM6 »
GenomeRNAi-PRDM6 »
Genecards-PRDM6


Protein-protein Interactions for PRDM6
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait C22orf41 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CBFA2T2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PRDM14 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PRDM6
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_C2H2-like IPR015880 1.29
Category members Znf_C2H2 IPR007087 0.92
Category members SET_dom IPR001214 0.29


Protein complexes (CORUM database) featuring PRDM6
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PRDM6
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0045892 negative regulation of transcription, DNA-dependent Database 1.15
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0018024 histone-lysine N-methyltransferase activity Database 0.73
Category members GO Category GO:0022008 neurogenesis Database 0.16
Category members GO Category GO:0042803 protein homodimerization activity Database 0
Category members GO Category GO:0046872 metal ion binding Database 0
Category members GO Category GO:0051151 negative regulation of smooth muscle cell differentiation Database 0


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