Results for the Category
RNA catabolic process
(GO:0006401)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| PPP1R8 | 1 | 1.500 | -0.440 | -2.097 | -1.198 | -1.038 | 0.291 | |
| PNPT1 | 1 | -1.420 | 2.630 | 1.469 | -0.694 | 0.280 | 0.483 | |
| HNRNPD | 1 | -0.108 | ||||||
| HNRNPD | 1 | 0.043 | -0.543 | -0.123 | 0.230 | 0.323 | ||
| ABCE1 | 1 | -0.020 | 0.020 | 0.162 | 0.198 | -0.994 | -0.077 | -0.271 |
| EXOSC7 | 0 | 0.320 | 0.360 | 0.498 | -0.198 | 0.040 | 0.896 | -0.129 |
| EXOSC5 | 0 | -1.260 | 2.170 | |||||
| EXOSC5 | 0 | -1.260 | 2.170 | 0.148 | 0.414 | |||
| XRN2 | 0 | 1.050 | -0.930 | -2.506 | -1.121 | -0.161 | -0.293 | -0.304 |
| PABPC4 | 0 | 0.660 | -0.110 | 0.211 | -0.241 | 0.015 | -0.206 | 0.105 |
| RNASEH2A | 0 | 0.140 | 0.630 | 1.183 | ||||
| SUPV3L1 | 0 | 1.500 | -0.040 | 0.342 | 0.274 | 0.234 | 0.059 | 0.110 |
| RNASEH1 | 0 | 1.440 | -0.940 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| ABCE1 | Ubiquitylation | K36 | 0.119 | _MGK(gl)LCIEVTPQSK_ | |
| ABCE1 | Ubiquitylation | K93 | 0.831 | _YCANAFK(gl)LHR_ | |
| ABCE1 | Ubiquitylation | K121 | 0.462 | 0.459 | _STALK(gl)ILAGK_ |
| ABCE1 | Ubiquitylation | K181 | 3.335 | _AAK(gl)GTVGSILDR_ | |
| ABCE1 | Ubiquitylation | K191 | -0.083 | -1.172 | _GTVGSILDRK(gl)DETK_ |
| ABCE1 | Ubiquitylation | K210 | 0.825 | _TQAIVCQQLDLTHLK(gl)ER_ | |
| ABCE1 | Ubiquitylation | K343 | 1.111 | -0.712 | _VAETANEEEVK(gl)K_ |
| ABCE1 | Ubiquitylation | K344 | 0.510 | -1.178 | _VAETANEEEVKK(gl)_ |
| ABCE1 | Ubiquitylation | K349 | -0.490 | _MCMYK(gl)YPGMK_ | |
| ABCE1 | Ubiquitylation | K397 | 1.151 | -0.084 | _LK(gl)PDEGGEVPVLNVSYKPQK_ |
| EXOSC5 | Ubiquitylation | K68 | -1.576 | _VSK(gl)EIFNK_ | |
| EXOSC5 | Ubiquitylation | K92 | -1.386 | 0.381 | _IGLPGVAEK(gl)SR_ |
| EXOSC5 | Ubiquitylation | K191 | -0.124 | _K(gl)LLMSSTK_ | |
| HNRNPD | Phosphorylation | S71 | 0.207 | 0.564 | _IDAS(ph)KNEEDEGHSNSSPR_ |
| HNRNPD | Ubiquitylation | K72 | -0.128 | _IDASK(gl)NEEDEGHSNSSPR_ | |
| HNRNPD | Phosphorylation | S82 | 0.468 | 0.491 | _IDASKNEEDEGHSNS(ph)SPR_ |
| HNRNPD | Phosphorylation | S83 | 0.540 | 0.447 | _IDASKNEEDEGHSNSS(ph)PR_ |
| HNRNPD | Ubiquitylation | K111 | 1.461 | _MFIGGLSWDTTKK(gl)_ | |
| HNRNPD | Ubiquitylation | K114 | 1.183 | 2.839 | _DLK(gl)DYFSK_ |
| HNRNPD | Ubiquitylation | K129 | -0.154 | _FGEVVDCTLK(gl)LDPITGR_ | |
| HNRNPD | Ubiquitylation | K165 | 0.293 | _LNGK(gl)VIDPK_ | |
| HNRNPD | Phosphorylation | S190 | 0.067 | 0.142 | _IFVGGLS(ph)PDTPEEK_ |
| HNRNPD | Ubiquitylation | K197 | 0.079 | 0.081 | _IFVGGLSPDTPEEK(gl)IR_ |
| HNRNPD | Ubiquitylation | K251 | 0.873 | _YHNVGLSK(gl)CEIK_ | |
| HNRNPD | Ubiquitylation | K255 | 1.330 | 0.804 | _CEIK(gl)VAMSK_ |
| HNRNPD | Ubiquitylation | K260 | 0.443 | -1.116 | _VAMSK(gl)EQYQQQQQWGSR_ |
| PABPC4 | Ubiquitylation | K78 | -1.247 | _ALDTMNFDVIK(gl)GKPIR_ | |
| PABPC4 | Ubiquitylation | K95 | -0.387 | 0.662 | _K(gl)SGVGNVFIK_ |
| PABPC4 | Ubiquitylation | K104 | -1.334 | _SGVGNVFIK(gl)NLDK_ | |
| PABPC4 | Ubiquitylation | K108 | -0.071 | 0.530 | _NLDK(gl)SIDNK_ |
| PABPC4 | Ubiquitylation | K186 | -0.875 | -0.344 | _EAELGAK(gl)AK_ |
| PABPC4 | Ubiquitylation | K188 | -0.826 | -0.017 | _AK(gl)EFTNVYIK_ |
| PABPC4 | Ubiquitylation | K279 | 0.039 | 0.151 | _K(gl)FEQLKQER_ |
| PABPC4 | Ubiquitylation | K284 | -0.160 | 0.349 | _FEQLK(gl)QER_ |
| PABPC4 | Ubiquitylation | K309 | 0.526 | _NLDDTIDDEK(gl)LRK_ | |
| PABPC4 | Ubiquitylation | K312 | -0.971 | _K(gl)EFSPFGSITSAK_ | |
| PABPC4 | Ubiquitylation | K361 | -0.217 | _IVGSK(gl)PLYVALAQR_ | |
| PABPC4 | Ubiquitylation | K375 | 0.739 | _K(gl)AHLTNQYMQR_ | |
| PPP1R8 | Ubiquitylation | K234 | 1.514 | _NMVQTAVVPVK(gl)K_ | |
| PPP1R8 | Ubiquitylation | K235 | 1.514 | _NMVQTAVVPVK(gl)K_ | |
| RNASEH1 | Phosphorylation | S76 | -0.334 | -0.047 | _SAS(ph)PEVSEGHENQHGQESEAK_ |
| RNASEH2A | Ubiquitylation | K64 | -0.163 | -0.965 | _LADLEALK(gl)VADSK_ |
| RNASEH2A | Ubiquitylation | K69 | -1.087 | _VADSK(gl)TLLESERER_ | |
| SUPV3L1 | Phosphorylation | S725 | -0.599 | -0.964 | _ATEPPS(ph)PDAGELSLASR_ |
| XRN2 | Ubiquitylation | K132 | 0.183 | _EGMEAAVEK(gl)QR_ | |
| XRN2 | Phosphorylation | T439 | -0.332 | -1.539 | _RDQPAFTPSGILT(ph)PHALGSR_ |
| XRN2 | Phosphorylation | S448 | 0.425 | 0.037 | _NS(ph)PGSQVASNPR_ |
| XRN2 | Phosphorylation | S473 | 0.104 | -0.751 | _MQNNSSPS(ph)ISPNTSFTSDGSPSPLGGIK_ |
| XRN2 | Phosphorylation | S475 | 0.436 | _MQNNSSPSIS(ph)PNTSFTSDGSPSPLGGIK_ | |
| XRN2 | Ubiquitylation | K493 | -1.223 | _MQNNSSPSISPNTSFTSDGSPSPLGGIK(gl)R_ | |
| XRN2 | Phosphorylation | S499 | -1.444 | _AEDS(ph)DSEPEPEDNVR_ | |
| XRN2 | Ubiquitylation | K533 | 0.431 | _NKFDVDAADEK(gl)FR_ |
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