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Query: PABPC4

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PABPC4 0 1.512 0.660 -0.110 0.211 -0.241 0.015 -0.206 0.105

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PABPC4 Ubiquitylation K95 -0.387 0.662 _K(gl)SGVGNVFIK_
PABPC4 Ubiquitylation K108 -0.071 0.530 _NLDK(gl)SIDNK_
PABPC4 Ubiquitylation K284 -0.160 0.349 _FEQLK(gl)QER_
PABPC4 Ubiquitylation K279 0.039 0.151 _K(gl)FEQLKQER_
PABPC4 Ubiquitylation K188 -0.826 -0.017 _AK(gl)EFTNVYIK_
PABPC4 Ubiquitylation K361 -0.217 _IVGSK(gl)PLYVALAQR_
PABPC4 Ubiquitylation K186 -0.875 -0.344 _EAELGAK(gl)AK_
PABPC4 Ubiquitylation K78 -1.247 _ALDTMNFDVIK(gl)GKPIR_
PABPC4 Ubiquitylation K104 -1.334 _SGVGNVFIK(gl)NLDK_
PABPC4 Ubiquitylation K309 0.526 _NLDDTIDDEK(gl)LRK_
PABPC4 Ubiquitylation K312 -0.971 _K(gl)EFSPFGSITSAK_
PABPC4 Ubiquitylation K375 0.739 _K(gl)AHLTNQYMQR_

Background Information for PABPC4:


Pubmed-PABPC4 »
Uniprot-PABPC4 »
Biogrid-PABPC4 »
ProteomicsDB-PABPC4 »

Tumorportal-PABPC4 »
COSMIC-PABPC4 »
GenomeRNAi-PABPC4 »
Genecards-PABPC4


Protein-protein Interactions for PABPC4
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait GSPT1;GSPT2 Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPU Cat. description Hein, Mann, Cell 2015
Category members IP bait NPM1 Cat. description Hein, Mann, Cell 2015
Category members IP bait PABPC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait PPP1CB Cat. description Hein, Mann, Cell 2015
Category members IP bait APOBEC3D Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ELAVL2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GSPT2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HNRPDL Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRA2A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZFC3H1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PABPC4
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members RRM_dom IPR000504 4.34
Category members RRM_dom_euk IPR003954 0.18
Category members PABP_HYD IPR002004 0
Category members PABP_1234 IPR006515 0


Protein complexes (CORUM database) featuring PABPC4
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PABPC4
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members DDR Literature pubmedid:24332808 Marechal et al., 2014 RPA-mediated recruitment INF
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0006412 translation Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members DDR Literature pubmedid:TBD1_UV_decreased Elia et al, 2015 UV decreased acetylation events Elia et al. 10.54
Category members GO Category GO:0030529 ribonucleoprotein complex Database 8.45
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0010494 cytoplasmic stress granule Database 1.32
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0008143 poly(A) RNA binding Database 0.44
Category members GO Category GO:0007596 blood coagulation Database 0.4
Category members GO Category GO:0006396 RNA processing Database 0.17
Category members GO Category GO:0006401 RNA catabolic process Database 0
Category members GO Category GO:0008266 poly(U) RNA binding Database 0


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