RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
NCL	3	-0.530	0.500	-0.279	-0.044	0.135
RBM17	1	-1.230	1.900	-0.359	-0.577	-0.033	-0.049	0.215
PABPC5	1	2.120	-1.000	0.167	-0.387	-0.147	-0.312	-0.037
SRSF2	1	0.230	-0.340
SRSF2	1	0.230	-0.340	0.316	0.700	-0.680	-0.119	-0.358
PABPC1	0	0.100	-0.400	0.167	-0.387	-0.147	-0.312	-0.037
CNOT4	0	0.000	-0.080
PABPC4	0	0.660	-0.110	0.211	-0.241	0.015	-0.206	0.105
CIRBP	0	-0.810	0.840		0.581	-0.442
PABPC1L	0	1.810	-1.240	0.167	-0.387	-0.147	-0.312	-0.037
TIA1	0	-1.050	1.250
TIA1	0	-1.050	1.250	-0.721	-0.259	-0.319	-0.332	-0.199
TIA1	0	-1.050	1.250	-0.455			0.130	0.623
RBM19	0	-0.170	-0.070				-0.068	-0.145
RBM39	0	0.300	-0.500	0.373	-0.027	-0.100	-0.040	-0.124
ZCRB1	0	1.280	-0.580				-2.000	-0.518
RBMX	0	-0.670	0.330	0.351	-0.686	0.103	0.490	0.315
RBMX	0	-0.420	0.010	0.351	-0.686	0.103	0.490	0.315
RBMXL2	0	-1.150	1.080	0.351	-0.686	0.103	0.490	0.315
RBMXL3	0	0.590	-1.080	0.351	-0.686	0.103	0.490	0.315
TIAL1	0	-0.540	0.100
TIAL1	0	-0.540	0.100	-0.721	-0.259	-0.319	-0.332	-0.199
U2AF1	0	-0.080	-0.050	0.129	-0.015	0.165	0.219	0.101
U2AF1L4	0	-1.280	1.780	0.129	-0.015	0.165	0.219	0.101
ZRSR2	0	0.620	-0.290
PABPC3	0	-0.420	0.200	0.167	-0.387	-0.147	-0.312	-0.037
ELAVL3	0	1.020	-0.910
RBMXL1	0				-0.211	0.404	1.086	0.644
PABPC4L	0
PABPC4L	0			0.211	-0.241	0.015	-0.206	0.105

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CNOT4	Phosphorylation	S2	-0.674	-1.015	_(ac)S(ph)RSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICR_
CNOT4	Phosphorylation	S4	-0.674	-0.627	_S(ph)PDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICR_
ELAVL3	Phosphorylation	S358	1.100	1.114	_VLQVS(ph)FKTSK_
NCL	Phosphorylation	S67	0.084	0.215	_VVVS(ph)PTKK_
NCL	Phosphorylation	T69	0.262	0.250	_KVVVSPT(ph)KK_
NCL	Ubiquitylation	K70	0.073		_KVVVSPTK(gl)K_
NCL	Ubiquitylation	K71	0.073		_KVVVSPTK(gl)K_
NCL	Phosphorylation	T76	-0.311	-1.653	_KVAVAT(ph)PAK_
NCL	Ubiquitylation	K102	0.229		_TVTPAK(gl)AVTTPGKK_
NCL	Ubiquitylation	K116	0.184		_GATPGK(gl)ALVATPGKK_
NCL	Phosphorylation	T121	-0.434	-0.594	_ALVAT(ph)PGKK_
NCL	Ubiquitylation	K135	0.162		_GAAIPAKGAK(gl)_
NCL	Ubiquitylation	K324	1.129		_SAPELK(gl)TGISDVFAK_
NCL	Ubiquitylation	K333	1.065		_TGISDVFAK(gl)NDLAVVDVR_
NCL	Ubiquitylation	K377	0.914		_VFGNEIK(gl)LEKPK_
NCL	Ubiquitylation	K380	1.047		_VFGNEIKLEK(gl)PK_
NCL	Ubiquitylation	K398	0.982	1.070	_TLLAK(gl)NLPYK_
NCL	Ubiquitylation	K403	1.073		_NLPYK(gl)VTQDELK_
NCL	Ubiquitylation	K429	1.523		_SK(gl)GIAYIEFK_
NCL	Ubiquitylation	K467	1.082		_SISLYYTGEK(gl)GQNQDYR_
NCL	Ubiquitylation	K513	1.291	-0.285	_ATFIK(gl)VPQNQNGK_
NCL	Phosphorylation	S563	-0.006	0.046	_LELQGPRGS(ph)PNAR_
NCL	Phosphorylation	S580	1.509	0.943	_GLS(ph)EDTTEETLK_
NCL	Ubiquitylation	K589	0.843		_GLSEDTTEETLK(gl)ESFDGSVR_
NCL	Phosphorylation	S619	1.522	1.942	_GFGFVDFNS(ph)EEDAK_
PABPC1	Ubiquitylation	K78	-0.883	0.807	_ALDTMNFDVIK(gl)GKPVR_
PABPC1	Ubiquitylation	K95	-0.105	0.553	_K(gl)SGVGNIFIK_
PABPC1	Ubiquitylation	K104	-0.977	-0.336	_SGVGNIFIK(gl)NLDK_
PABPC1	Ubiquitylation	K108	-0.071	0.530	_NLDK(gl)SIDNK_
PABPC1	Ubiquitylation	K138	-0.960		_VVCDENGSK(gl)GYGFVHFETQEAAER_
PABPC1	Ubiquitylation	K157	-0.582		_AIEK(gl)MNGMLLNDRK_
PABPC1	Ubiquitylation	K188	-0.826	-0.017	_AK(gl)EFTNVYIK_
PABPC1	Ubiquitylation	K213	-0.170		_DLFGK(gl)FGPALSVK_
PABPC1	Ubiquitylation	K231	0.080		_SK(gl)GFGFVSFER_
PABPC1	Ubiquitylation	K259	-0.125		_ELNGK(gl)QIYVGR_
PABPC1	Ubiquitylation	K279	-0.143	0.326	_K(gl)FEQMK(gl)QDR_
PABPC1	Ubiquitylation	K284	-0.108	0.322	_K(gl)FEQMK(gl)QDR_
PABPC1	Ubiquitylation	K312	0.122		_K(gl)EFSPFGTITSAK_
PABPC1	Ubiquitylation	K361	-0.142		_IVATK(gl)PLYVALAQR_
PABPC1	Ubiquitylation	K512	-0.640	0.085	_TVPQYK(gl)YAAGVR_
PABPC1L	Ubiquitylation	K78	-0.883	0.807	_ALDTMNFDVIK(gl)GKPVR_
PABPC1L	Ubiquitylation	K95	-0.105	0.553	_K(gl)SGVGNIFIK_
PABPC1L	Ubiquitylation	K104	-0.977	-0.336	_SGVGNIFIK(gl)NLDK_
PABPC1L	Ubiquitylation	K108	-0.071	0.530	_NLDK(gl)SIDNK_
PABPC1L	Ubiquitylation	K138	-0.960		_VVCDENGSK(gl)GYGFVHFETQEAAER_
PABPC1L	Ubiquitylation	K157	-0.582		_AIEK(gl)MNGMLLNDRK_
PABPC1L	Ubiquitylation	K188	-0.826	-0.017	_AK(gl)EFTNVYIK_
PABPC1L	Ubiquitylation	K213	-0.170		_DLFGK(gl)FGPALSVK_
PABPC1L	Ubiquitylation	K231	0.080		_SK(gl)GFGFVSFER_
PABPC1L	Ubiquitylation	K259	-0.125		_ELNGK(gl)QIYVGR_
PABPC1L	Ubiquitylation	K279	-0.143	0.326	_K(gl)FEQMK(gl)QDR_
PABPC1L	Ubiquitylation	K284	-0.108	0.322	_K(gl)FEQMK(gl)QDR_
PABPC1L	Ubiquitylation	K312	0.122		_K(gl)EFSPFGTITSAK_
PABPC1L	Ubiquitylation	K361	-0.142		_IVATK(gl)PLYVALAQR_
PABPC1L	Ubiquitylation	K512	-0.640	0.085	_TVPQYK(gl)YAAGVR_
PABPC3	Ubiquitylation	K78	-0.883	0.807	_ALDTMNFDVIK(gl)GKPVR_
PABPC3	Ubiquitylation	K95	-0.105	0.553	_K(gl)SGVGNIFIK_
PABPC3	Ubiquitylation	K104	-0.977	-0.336	_SGVGNIFIK(gl)NLDK_
PABPC3	Ubiquitylation	K108	-0.071	0.530	_NLDK(gl)SIDNK_
PABPC3	Ubiquitylation	K138	-0.960		_VVCDENGSK(gl)GYGFVHFETQEAAER_
PABPC3	Ubiquitylation	K157	-0.582		_AIEK(gl)MNGMLLNDRK_
PABPC3	Ubiquitylation	K188	-0.826	-0.017	_AK(gl)EFTNVYIK_
PABPC3	Ubiquitylation	K213	-0.170		_DLFGK(gl)FGPALSVK_
PABPC3	Ubiquitylation	K231	0.080		_SK(gl)GFGFVSFER_
PABPC3	Ubiquitylation	K259	-0.125		_ELNGK(gl)QIYVGR_
PABPC3	Ubiquitylation	K279	-0.143	0.326	_K(gl)FEQMK(gl)QDR_
PABPC3	Ubiquitylation	K284	-0.108	0.322	_K(gl)FEQMK(gl)QDR_
PABPC3	Ubiquitylation	K312	0.122		_K(gl)EFSPFGTITSAK_
PABPC3	Ubiquitylation	K361	-0.142		_IVATK(gl)PLYVALAQR_
PABPC3	Ubiquitylation	K512	-0.640	0.085	_TVPQYK(gl)YAAGVR_
PABPC4	Ubiquitylation	K78	-1.247		_ALDTMNFDVIK(gl)GKPIR_
PABPC4	Ubiquitylation	K95	-0.387	0.662	_K(gl)SGVGNVFIK_
PABPC4	Ubiquitylation	K104	-1.334		_SGVGNVFIK(gl)NLDK_
PABPC4	Ubiquitylation	K108	-0.071	0.530	_NLDK(gl)SIDNK_
PABPC4	Ubiquitylation	K186	-0.875	-0.344	_EAELGAK(gl)AK_
PABPC4	Ubiquitylation	K188	-0.826	-0.017	_AK(gl)EFTNVYIK_
PABPC4	Ubiquitylation	K279	0.039	0.151	_K(gl)FEQLKQER_
PABPC4	Ubiquitylation	K284	-0.160	0.349	_FEQLK(gl)QER_
PABPC4	Ubiquitylation	K309	0.526		_NLDDTIDDEK(gl)LRK_
PABPC4	Ubiquitylation	K312	-0.971		_K(gl)EFSPFGSITSAK_
PABPC4	Ubiquitylation	K361		-0.217	_IVGSK(gl)PLYVALAQR_
PABPC4	Ubiquitylation	K375	0.739		_K(gl)AHLTNQYMQR_
PABPC4L	Ubiquitylation	K6	-1.519	-0.756	_(ac)M(ox)NVAAK(gl)YR_
PABPC4L	Ubiquitylation	K78	-1.247		_ALDTMNFDVIK(gl)GKPIR_
PABPC4L	Ubiquitylation	K95	-0.387	0.662	_K(gl)SGVGNVFIK_
PABPC4L	Ubiquitylation	K104	-1.334		_SGVGNVFIK(gl)NLDK_
PABPC4L	Ubiquitylation	K107	-0.071	0.530	_NLDK(gl)SIDNK_
PABPC4L	Ubiquitylation	K108	-0.071	0.530	_NLDK(gl)SIDNK_
PABPC4L	Ubiquitylation	K186	-0.875	-0.344	_EAELGAK(gl)AK_
PABPC4L	Ubiquitylation	K188	-0.826	-0.017	_AK(gl)EFTNVYIK_
PABPC4L	Ubiquitylation	K279	0.039	0.151	_K(gl)FEQLKQER_
PABPC4L	Ubiquitylation	K284	-0.160	0.349	_FEQLK(gl)QER_
PABPC4L	Ubiquitylation	K309	0.526		_NLDDTIDDEK(gl)LRK_
PABPC4L	Ubiquitylation	K312	-0.971		_K(gl)EFSPFGSITSAK_
PABPC4L	Ubiquitylation	K361		-0.217	_IVGSK(gl)PLYVALAQR_
PABPC4L	Ubiquitylation	K375	0.739		_K(gl)AHLTNQYMQR_
PABPC5	Ubiquitylation	K78	-0.883	0.807	_ALDTMNFDVIK(gl)GKPVR_
PABPC5	Ubiquitylation	K95	-0.105	0.553	_K(gl)SGVGNIFIK_
PABPC5	Ubiquitylation	K104	-0.977	-0.336	_SGVGNIFIK(gl)NLDK_
PABPC5	Ubiquitylation	K108	-0.071	0.530	_NLDK(gl)SIDNK_
PABPC5	Ubiquitylation	K138	-0.960		_VVCDENGSK(gl)GYGFVHFETQEAAER_
PABPC5	Ubiquitylation	K157	-0.582		_AIEK(gl)MNGMLLNDRK_
PABPC5	Ubiquitylation	K188	-0.826	-0.017	_AK(gl)EFTNVYIK_
PABPC5	Ubiquitylation	K213	-0.170		_DLFGK(gl)FGPALSVK_
PABPC5	Ubiquitylation	K231	0.080		_SK(gl)GFGFVSFER_
PABPC5	Ubiquitylation	K259	-0.125		_ELNGK(gl)QIYVGR_
PABPC5	Ubiquitylation	K279	-0.143	0.326	_K(gl)FEQMK(gl)QDR_
PABPC5	Ubiquitylation	K284	-0.108	0.322	_K(gl)FEQMK(gl)QDR_
PABPC5	Ubiquitylation	K312	0.122		_K(gl)EFSPFGTITSAK_
PABPC5	Ubiquitylation	K361	-0.142		_IVATK(gl)PLYVALAQR_
PABPC5	Ubiquitylation	K512	-0.640	0.085	_TVPQYK(gl)YAAGVR_
RBM17	Phosphorylation	S2		1.665	_(ac)S(ph)LYDDLGVETSDSK_
RBM17	Phosphorylation	S155	-0.257	-0.289	_RPDPDS(ph)DEDEDYERER_
RBM17	Phosphorylation	S169		-1.481	_S(ph)MGGAAIAPPTSLVEK_
RBM17	Phosphorylation	S222	0.222	-0.079	_S(ph)PTGPSNSFLANMGGTVAHK_
RBM17	Phosphorylation	T224	0.201		_SPT(ph)GPSNSFLANMGGTVAHK_
RBM39	Phosphorylation	S97	0.076	-0.250	_YRS(ph)PYSGPK_
RBM39	Phosphorylation	S117	-0.782	-0.233	_IGLPHS(ph)IK_
RBM39	Ubiquitylation	K119		0.803	_IGLPHSIK(gl)LSR_
RBM39	Phosphorylation	S136	-0.830	-0.414	_S(ph)PVREPIDNLTPEER_
RBM39	Phosphorylation	S333	0.768	0.511	_TDAS(ph)SASSFLDSDELER_
RBM39	Phosphorylation	S334	0.122	0.530	_TDASS(ph)ASSFLDSDELER_
RBM39	Phosphorylation	S337	-0.224	-0.022	_TDASSASS(ph)FLDSDELER_
RBMX	Ubiquitylation	K22	-0.311	1.156	_LFIGGLNTETNEK(gl)ALEAVFGK_
RBMX	Ubiquitylation	K30	0.487	1.225	_ALEAVFGK(gl)YGR_
RBMX	Phosphorylation	S58	0.307	-0.033	_GFAFVTFES(ph)PADAK_
RBMX	Ubiquitylation	K63	0.299	0.084	_GFAFVTFESPADAK(gl)DAAR_
RBMX	Ubiquitylation	K80	0.062		_AIK(gl)VEQATKPSFESGR_
RBMX	Ubiquitylation	K86	0.062		_AIK(gl)VEQATKPSFESGR_
RBMX	Phosphorylation	S88	0.714	0.720	_VEQATKPS(ph)FESGR_
RBMX	Ubiquitylation	K150	-0.568		_GPLPVK(gl)R_
RBMX	Phosphorylation	S208	0.568	0.751	_RDVYLS(ph)PR_
RBMX	Ubiquitylation	K217	-0.306	0.061	_DDGYSTK(gl)DSYSSR_
RBMX	Phosphorylation	S249	-0.240	-0.241	_DYGHS(ph)SSRDDYPSR_
RBMX	Phosphorylation	S250	0.748		_DYGHSS(ph)SRDDYPSR_
RBMX	Phosphorylation	S280	-0.500	0.128	_DRDYSDHPSGGS(ph)YR_
RBMX	Phosphorylation	S316	0.753	0.816	_YDDYSSS(ph)RDGYGGSR_
RBMX	Phosphorylation	S326	0.461	0.344	_DGYGGSRDS(ph)YSSSR_
RBMX	Phosphorylation	S332	-0.194	-0.215	_DSYSSSRS(ph)DLYSSGR_
RBMX	Phosphorylation	S352	-0.127	-0.202	_GLPPS(ph)MER_
RBMXL1	Phosphorylation	T85	1.053		_VEQAT(ph)KPSFER_
RBMXL1	Phosphorylation	S88	0.764	0.638	_VEQATKPS(ph)FER_
RBMXL1	Phosphorylation	S326	0.461	0.344	_DGYGGSRDS(ph)YSSSR_
RBMXL1	Phosphorylation	S351	-0.719		_GLPPS(ph)VER_
RBMXL2	Ubiquitylation	K22	-0.311	1.156	_LFIGGLNTETNEK(gl)ALEAVFGK_
RBMXL2	Ubiquitylation	K30	0.487	1.225	_ALEAVFGK(gl)YGR_
RBMXL2	Phosphorylation	S58	0.307	-0.033	_GFAFVTFES(ph)PADAK_
RBMXL2	Ubiquitylation	K63	0.299	0.084	_GFAFVTFESPADAK(gl)DAAR_
RBMXL2	Ubiquitylation	K80	0.062		_AIK(gl)VEQATKPSFESGR_
RBMXL2	Ubiquitylation	K86	0.062		_AIK(gl)VEQATKPSFESGR_
RBMXL2	Phosphorylation	S88	0.714	0.720	_VEQATKPS(ph)FESGR_
RBMXL2	Ubiquitylation	K150	-0.568		_GPLPVK(gl)R_
RBMXL2	Phosphorylation	S208	0.568	0.751	_RDVYLS(ph)PR_
RBMXL2	Ubiquitylation	K217	-0.306	0.061	_DDGYSTK(gl)DSYSSR_
RBMXL2	Phosphorylation	S249	-0.240	-0.241	_DYGHS(ph)SSRDDYPSR_
RBMXL2	Phosphorylation	S250	0.748		_DYGHSS(ph)SRDDYPSR_
RBMXL2	Phosphorylation	S280	-0.500	0.128	_DRDYSDHPSGGS(ph)YR_
RBMXL2	Phosphorylation	S316	0.753	0.816	_YDDYSSS(ph)RDGYGGSR_
RBMXL2	Phosphorylation	S326	0.461	0.344	_DGYGGSRDS(ph)YSSSR_
RBMXL2	Phosphorylation	S332	-0.194	-0.215	_DSYSSSRS(ph)DLYSSGR_
RBMXL2	Phosphorylation	S352	-0.127	-0.202	_GLPPS(ph)MER_
RBMXL3	Ubiquitylation	K22	-0.311	1.156	_LFIGGLNTETNEK(gl)ALEAVFGK_
RBMXL3	Ubiquitylation	K30	0.487	1.225	_ALEAVFGK(gl)YGR_
RBMXL3	Phosphorylation	S58	0.307	-0.033	_GFAFVTFES(ph)PADAK_
RBMXL3	Ubiquitylation	K63	0.299	0.084	_GFAFVTFESPADAK(gl)DAAR_
RBMXL3	Ubiquitylation	K80	0.062		_AIK(gl)VEQATKPSFESGR_
RBMXL3	Ubiquitylation	K86	0.062		_AIK(gl)VEQATKPSFESGR_
RBMXL3	Phosphorylation	S88	0.714	0.720	_VEQATKPS(ph)FESGR_
RBMXL3	Ubiquitylation	K150	-0.568		_GPLPVK(gl)R_
RBMXL3	Phosphorylation	S208	0.568	0.751	_RDVYLS(ph)PR_
RBMXL3	Ubiquitylation	K217	-0.306	0.061	_DDGYSTK(gl)DSYSSR_
RBMXL3	Phosphorylation	S249	-0.240	-0.241	_DYGHS(ph)SSRDDYPSR_
RBMXL3	Phosphorylation	S250	0.748		_DYGHSS(ph)SRDDYPSR_
RBMXL3	Phosphorylation	S280	-0.500	0.128	_DRDYSDHPSGGS(ph)YR_
RBMXL3	Phosphorylation	S316	0.753	0.816	_YDDYSSS(ph)RDGYGGSR_
RBMXL3	Phosphorylation	S326	0.461	0.344	_DGYGGSRDS(ph)YSSSR_
RBMXL3	Phosphorylation	S332	-0.194	-0.215	_DSYSSSRS(ph)DLYSSGR_
RBMXL3	Phosphorylation	S352	-0.127	-0.202	_GLPPS(ph)MER_
SRSF2	Phosphorylation	S2	-0.541	0.173	_(ac)S(ph)YGRPPPDVEGMTSLK_
SRSF2	Phosphorylation	T22	0.740	0.763	_VDNLT(ph)YRTSPDTLR_
SRSF2	Phosphorylation	T25	0.781	0.654	_VDNLTYRT(ph)SPDTLR_
SRSF2	Phosphorylation	S26	0.636	0.891	_VDNLTYRTS(ph)PDTLR_
SRSF2	Phosphorylation	T29		0.970	_VDNLTYRTSPDT(ph)LR_
SRSF2	Ubiquitylation	K63	1.341	1.921	_VFEK(gl)YGR_
SRSF2	Phosphorylation	S182	-0.171	-0.115	_SKS(ph)PPKSPEEEGAVSS_
TIA1	Ubiquitylation	K91	0.902		_VNWATTPSSQKK(gl)_
TIAL1	Ubiquitylation	K91	0.902		_VNWATTPSSQKK(gl)_
TIAL1	Ubiquitylation	K122	0.503	0.809	_SAFAPFGK(gl)ISDAR_
U2AF1	Ubiquitylation	K15	0.020		_DK(gl)VNCSFYFK_
U2AF1L4	Ubiquitylation	K15	0.020		_DK(gl)VNCSFYFK_
ZCRB1	Ubiquitylation	K74		0.027	_AINNK(gl)QLFGR_
ZCRB1	Phosphorylation	S155	-0.945	-0.900	_KAPEPEEEIEEVEES(ph)EDEGEDPALDSLSQAIAFQQAK_
ZRSR2	Phosphorylation	S349	-0.162	0.086	_DIYLS(ph)PDR_
ZRSR2	Phosphorylation	S384		0.014	_RNPS(ph)PDHSYK_