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Query: ABCE1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
ABCE1 1 2.831 -0.020 0.020 0.162 0.198 -0.994 -0.077 -0.271

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
ABCE1 Ubiquitylation K121 0.462 0.459 _STALK(gl)ILAGK_
ABCE1 Ubiquitylation K397 1.151 -0.084 _LK(gl)PDEGGEVPVLNVSYKPQK_
ABCE1 Ubiquitylation K349 -0.490 _MCMYK(gl)YPGMK_
ABCE1 Ubiquitylation K343 1.111 -0.712 _VAETANEEEVK(gl)K_
ABCE1 Ubiquitylation K191 -0.083 -1.172 _GTVGSILDRK(gl)DETK_
ABCE1 Ubiquitylation K344 0.510 -1.178 _VAETANEEEVKK(gl)_
ABCE1 Ubiquitylation K36 0.119 _MGK(gl)LCIEVTPQSK_
ABCE1 Ubiquitylation K93 0.831 _YCANAFK(gl)LHR_
ABCE1 Ubiquitylation K181 3.335 _AAK(gl)GTVGSILDR_
ABCE1 Ubiquitylation K210 0.825 _TQAIVCQQLDLTHLK(gl)ER_

Background Information for ABCE1:


Pubmed-ABCE1 »
Uniprot-ABCE1 »
Biogrid-ABCE1 »
ProteomicsDB-ABCE1 »

Tumorportal-ABCE1 »
COSMIC-ABCE1 »
GenomeRNAi-ABCE1 »
Genecards-ABCE1


Protein-protein Interactions for ABCE1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BRCA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait CDC6 Cat. description Hein, Mann, Cell 2015
Category members IP bait KIF13B Cat. description Hein, Mann, Cell 2015
Category members IP bait SIDT2 Cat. description Hein, Mann, Cell 2015
Category members IP bait XRCC5 Cat. description Hein, Mann, Cell 2015


Protein Domains in ABCE1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members P-loop_NTPase IPR027417 2.83
Category members AAA+_ATPase IPR003593 0.38
Category members ABC_transporter-like IPR003439 0.15
Category members 4Fe4S-bd_dom IPR001450 0
Category members RNaseL-inhib_metal-bd_dom IPR007209 0


Protein complexes (CORUM database) featuring ABCE1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring ABCE1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0019048 modulation by virus of host morphology or physiology Database 7.81
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0016887 ATPase activity Database 2.28
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0017111 nucleoside-triphosphatase activity Database 0.5
Category members GO Category GO:0008428 ribonuclease inhibitor activity Database 0.21
Category members GO Category GO:0006401 RNA catabolic process Database 0
Category members GO Category GO:0009615 response to virus Database 0
Category members GO Category GO:0051536 iron-sulfur cluster binding Database 0


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