Results for the Category
BARDET-BIEDL SYNDROME
(BARDET-BIEDL_SYNDROME)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| TRIM32 | 1 | 0.220 | 0.640 | -1.832 | -0.176 | -1.091 | ||
| BBS2 | 1 | -0.810 | 0.820 | |||||
| CEP290 | 1 | 1.020 | -0.690 | |||||
| CEP290 | 1 | 2.010 | -1.090 | |||||
| MKS1 | 0 | |||||||
| SDCCAG8 | 0 | 0.350 | -0.490 | |||||
| BBS7 | 0 | |||||||
| BBS4 | 0 | 0.310 | 0.160 | |||||
| CCDC28B | 0 | 1.570 | -0.410 | |||||
| BBS5 | 0 | -0.760 | -0.060 | |||||
| BBS5 | 0 | -0.090 | 0.120 | |||||
| BBS5 | 0 | -0.030 | 0.000 | |||||
| TMEM67 | 0 | -0.480 | 0.280 | |||||
| TTC8 | 0 | 0.800 | -1.070 | |||||
| KIF7 | 0 | -0.700 | 0.600 | 0.688 | ||||
| KIF7 | 0 | 0.280 | -0.500 | 0.688 | ||||
| BBS10 | 0 | -0.750 | 1.270 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| BBS10 | Ubiquitylation | K40 | -1.233 | 0.530 | _QVLCTK(gl)PTGEVLLSR_ |
| BBS2 | Ubiquitylation | K231 | -0.482 | _FGYALSNGTVGVYDK(gl)TSR_ | |
| BBS2 | Ubiquitylation | K360 | -1.721 | _NYEENAK(gl)AELASPLNEADGHR_ | |
| BBS2 | Phosphorylation | S365 | 2.366 | _AELAS(ph)PLNEADGHR_ | |
| BBS2 | Ubiquitylation | K659 | -0.582 | _DLLNGYK(gl)IR_ | |
| BBS4 | Ubiquitylation | K28 | -0.615 | _TQFPVSTESQK(gl)PR_ | |
| BBS4 | Ubiquitylation | K302 | -2.331 | _YVAAISCLK(gl)R_ | |
| BBS4 | Ubiquitylation | K408 | -2.242 | _NALAQYQEMEK(gl)K_ | |
| BBS4 | Ubiquitylation | K409 | -2.242 | _NALAQYQEMEK(gl)K_ | |
| BBS5 | Ubiquitylation | K150 | -1.116 | _SALIQNK(gl)QLR_ | |
| BBS7 | Ubiquitylation | K59 | -1.507 | _KGEAAAVFK(gl)TLPGPK_ | |
| BBS7 | Ubiquitylation | K479 | -0.952 | _IQPK(gl)TCQVR_ | |
| BBS7 | Ubiquitylation | K685 | -0.505 | _FK(gl)GTNVK_ | |
| CCDC28B | Ubiquitylation | K128 | -0.006 | _EMQEK(gl)LAR_ | |
| CEP290 | Ubiquitylation | K593 | -1.125 | _K(gl)LDLLSLK_ | |
| CEP290 | Ubiquitylation | K735 | -1.199 | _KEAINYSQQLAK(gl)ANLK_ | |
| CEP290 | Ubiquitylation | K830 | 0.626 | _EYLSEK(gl)ETWK_ | |
| CEP290 | Ubiquitylation | K1178 | -1.408 | _DK(gl)EVESLR_ | |
| CEP290 | Ubiquitylation | K1336 | -0.794 | _GLEELISTLK(gl)DTK_ | |
| CEP290 | Ubiquitylation | K1552 | -0.135 | _LNQK(gl)EEVLKK_ | |
| CEP290 | Ubiquitylation | K1682 | 0.578 | _LQLQENHEDEVKK(gl)_ | |
| KIF7 | Ubiquitylation | K1208 | 0.476 | _YMWINQELK(gl)QK_ | |
| MKS1 | Ubiquitylation | K178 | -0.574 | 0.716 | _GMEGGILK(gl)SR_ |
| MKS1 | Ubiquitylation | K469 | -0.213 | _IPGSFK(gl)GER_ | |
| MKS1 | Ubiquitylation | K507 | 0.137 | -0.095 | _AFMESSSLQK(gl)R_ |
| SDCCAG8 | Phosphorylation | S4 | 1.097 | 1.380 | _(ac)AKS(ph)PENSTLEEILGQYQR_ |
| TMEM67 | Ubiquitylation | K650 | 1.063 | 0.642 | _VLK(gl)AVEGEGGVR_ |
| TMEM67 | Ubiquitylation | K986 | 0.268 | _NLASK(gl)TLVDQR_ | |
| TRIM32 | Ubiquitylation | K175 | 0.333 | -0.305 | _AALEGVSK(gl)DLQAR_ |
| TRIM32 | Ubiquitylation | K204 | 1.221 | _K(gl)FFTGSLAEVEK_ | |
| TRIM32 | Ubiquitylation | K405 | 2.753 | _GFLK(gl)EIRR_ | |
| TRIM32 | Ubiquitylation | K506 | 0.638 | _GSGVVK(gl)YSCLCSAVRPK_ | |
| TTC8 | Ubiquitylation | K184 | -0.765 | _LNLTK(gl)YSQKPK_ | |
| TTC8 | Ubiquitylation | K259 | 0.324 | _VQIGK(gl)CYYR_ |
.
© Copyright Svejstrup Laboratory 2015