bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Category

Results for the Category
RC complex during S-phase of cell cycle
(1004)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

 Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
RPA1 6 0.500 0.350 3.133 3.046 0.303 1.770 2.112
RFC1 3 2.530 -1.230 0.635 1.060 1.028 0.826
RPA3 3 -0.760 1.900 1.805
RPA2 3 -1.830 3.700 1.524
RPA2 3 -1.830 3.700 2.592
TOP1 3 0.970 -0.880
TOP1 3 0.970 -0.880 0.567 0.872 1.232 0.631 0.425
PARP1 2
PARP1 2 -0.200 0.357 0.412 0.442 0.293
POLD1 0 1.600 -1.300 -0.932 0.362 0.283
POLD1 0 1.600 -1.300
POLA1 0 0.720 -0.610 0.594 0.355 0.027
LIG1 0 0.370 -0.580
CDK2 0 -0.040 -0.300 -0.578 -0.797
CDK2 0 -0.040 -0.300 -0.202 -0.884 -0.107 -0.097 -0.501
CCNA2 0 -0.530 0.260
POLE 0 -0.404 0.128 -0.376 -0.212
POLE 0 -0.273

PTM Sites:

 Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
CCNA2 Ubiquitylation K54 -0.746 _AALAVLK(gl)SGNPR_
CCNA2 Ubiquitylation K68 -1.274 _GLAQQQRPK(gl)TR_
CDK2 Ubiquitylation K6 -0.130 -0.399 _(ac)MENFQK(gl)VEK_
CDK2 Ubiquitylation K6 0.011 -0.784 _(ac)M(ox)EDYTK(gl)IEK_
CDK2 Phosphorylation T14 0.429 _IGEGT(ph)YGVVYK_
CDK2 Phosphorylation Y15 0.697 0.743 _IGEGTY(ph)GVVYK_
CDK2 Ubiquitylation K20 0.272 _IGEGTYGVVYK(gl)AR_
CDK2 Ubiquitylation K20 -0.327 -0.270 _IGEGTYGVVYK(gl)GR_
CDK2 Ubiquitylation K24 0.366 _NK(gl)LTGEVVALKK_
CDK2 Ubiquitylation K33 0.033 _NKLTGEVVALK(gl)K_
CDK2 Ubiquitylation K33 0.736 0.239 _TTGQVVAMK(gl)K_
CDK2 Ubiquitylation K34 0.542 _LTGEVVALKK(gl)_
CDK2 Ubiquitylation K34 -0.306 _TTGQVVAMKK(gl)_
CDK2 Ubiquitylation K58 0.312 -0.262 _EISLLK(gl)ELR_
CDK2 Ubiquitylation K136 -0.468 _DLK(gl)PQNLLIDDK(gl)GTIK_
CDK2 Ubiquitylation K145 0.161 -0.954 _DLKPQNLLIDDK(gl)GTIK_
CDK2 Ubiquitylation K149 -0.038 _GTIK(gl)LADFGLAR_
CDK2 Ubiquitylation K251 -0.047 -1.236 _WK(gl)PGSLASHVK_
CDK2 Ubiquitylation K280 0.179 -1.210 _MLIYDPAK(gl)R_
CDK2 Ubiquitylation K298 -1.907 -2.380 _QDFSK(gl)VVPPLDEDGR_
LIG1 Phosphorylation S49 0.101 _EWNGVVSES(ph)DSPVK_
LIG1 Phosphorylation S51 0.145 -0.066 _EWNGVVSESDS(ph)PVK_
LIG1 Phosphorylation S66 0.671 0.408 _VLGS(ph)EGEEEDEALSPAK_
LIG1 Phosphorylation S76 -0.083 0.108 _VLGSEGEEEDEALS(ph)PAK_
LIG1 Phosphorylation S88 1.273 _GQKPALDCS(ph)QVSPPRPATSPENNASLSDTSPMDSSPSGIPK_
LIG1 Phosphorylation S141 0.697 0.877 _TIQEVLEEQS(ph)EDEDREAK_
LIG1 Phosphorylation T182 -0.768 -0.709 _EGEDGDQPT(ph)TPPKPLK_
LIG1 Phosphorylation T183 -0.923 -0.825 _EGEDGDQPTT(ph)PPKPLK_
LIG1 Phosphorylation T195 0.021 0.224 _AET(ph)PTESVS(ph)EPEVATK_
LIG1 Phosphorylation T197 0.441 0.125 _AETPT(ph)ESVSEPEVATK_
LIG1 Phosphorylation S199 0.721 _AET(ph)PTES(ph)VSEPEVATK_
LIG1 Phosphorylation S201 -0.213 0.070 _AET(ph)PTESVS(ph)EPEVATK_
PARP1 Phosphorylation S41 -0.803 _MAIMVQS(ph)PMFDGK_
PARP1 Ubiquitylation K84 1.223 _WDDQQK(gl)VK_
PARP1 Ubiquitylation K86 1.058 _VK(gl)KTAEAGGVTGK_
PARP1 Ubiquitylation K87 1.058 _VK(gl)KTAEAGGVTGK_
PARP1 Ubiquitylation K97 1.386 0.406 _TAEAGGVTGK(gl)GQDGIGSK_
PARP1 Ubiquitylation K105 0.828 _GQDGIGSK(gl)AEK_
PARP1 Ubiquitylation K108 1.317 _GQDGIGSKAEK(gl)_
PARP1 Ubiquitylation K119 1.569 _TLGDFAAEYAK(gl)SNR_
PARP1 Ubiquitylation K131 1.025 1.620 _GCMEK(gl)IEK_
PARP1 Ubiquitylation K197 0.445 1.157 _K(gl)QLPGVK_
PARP1 Ubiquitylation K254 0.589 _AQNDLIWNIKDELKK(gl)_
PARP1 Ubiquitylation K262 0.456 _VCSTNDLK(gl)ELLIFNK_
PARP1 Ubiquitylation K320 1.464 1.034 _SDAYYCTGDVTAWTK(gl)CMVK_
PARP1 Ubiquitylation K331 -0.425 -0.480 _TQTPNRK(gl)EWVTPK_
PARP1 Ubiquitylation K337 0.462 0.332 _EWVTPK(gl)EFR_
PARP1 Ubiquitylation K346 0.370 0.411 _EISYLK(gl)K_
PARP1 Phosphorylation T368 -1.474 -1.410 _IFPPETSASVAAT(ph)PPPSTASAPAAVNSSASADKPLSNM(ox)K_
PARP1 Ubiquitylation K400 0.844 1.095 _ILTLGK(gl)LSR_
PARP1 Ubiquitylation K414 1.227 1.241 _AMIEK(gl)LGGK_
PARP1 Ubiquitylation K418 1.131 _LGGK(gl)LTGTANK_
PARP1 Ubiquitylation K425 0.912 0.815 _LTGTANK(gl)ASLCISTKK_
PARP1 Ubiquitylation K433 0.942 _ASLCISTK(gl)K_
PARP1 Ubiquitylation K434 0.020 _ASLCISTKK(gl)_
PARP1 Ubiquitylation K447 1.480 _MEEVK(gl)EANIR_
PARP1 Ubiquitylation K518 0.108 _GQVKEEGINK(gl)SEK_
PARP1 Ubiquitylation K521 0.630 _GQVKEEGINKSEK(gl)R_
PARP1 Ubiquitylation K548 0.125 -0.480 _GGAAVDPDSGLEHSAHVLEK(gl)GGK_
PARP1 Ubiquitylation K551 0.492 -0.573 _GGAAVDPDSGLEHSAHVLEKGGK(gl)_
PARP1 Ubiquitylation K629 1.632 _TGNAWHSK(gl)NFTK_
PARP1 Ubiquitylation K633 0.964 0.091 _NFTK(gl)YPK_
PARP1 Ubiquitylation K654 -0.086 _K(gl)LTVNPGTK_
PARP1 Ubiquitylation K662 0.112 _LTVNPGTK(gl)SK_
PARP1 Ubiquitylation K664 -0.042 -0.111 _LTVNPGTKSK(gl)_
PARP1 Ubiquitylation K683 0.983 1.355 _MIFDVESM(ox)K(gl)K_
PARP1 Ubiquitylation K684 1.213 1.355 _MIFDVESMKK(gl)_
PARP1 Ubiquitylation K700 0.448 _MPLGK(gl)LSK_
PARP1 Phosphorylation S782 0.648 0.490 _GGS(ph)DDSSKDPIDVNYEK_
PARP1 Ubiquitylation K949 0.738 _HSVK(gl)GLGK_
POLA1 Phosphorylation S192 -0.049 -0.187 _S(ph)IGASPNPFSVHTATAVPSGK_
POLA1 Phosphorylation S196 -0.374 _RSIGAS(ph)PNPFSVHTATAVPSGK_
POLA1 Ubiquitylation K1120 -0.317 _DTIVENIQK(gl)R_
POLD1 Ubiquitylation K414 -1.315 _AQTLK(gl)VQTFPFLGR_
POLD1 Ubiquitylation K439 -1.108 _DSSFQSK(gl)QTGRR_
POLD1 Ubiquitylation K447 -1.286 _DTK(gl)VVSMVGR_
POLD1 Ubiquitylation K554 -0.798 _GQQVK(gl)VVSQLLR_
POLD1 Ubiquitylation K674 -1.082 -1.843 _TPTGDEFVK(gl)TSVR_
POLD1 Ubiquitylation K758 -0.638 _TK(gl)QLVESK_
POLD1 Ubiquitylation K853 -0.080 -1.776 _MDCK(gl)GLEAVR_
POLD1 Ubiquitylation K911 -0.089 -0.915 _IDISQLVITK(gl)ELTR_
POLD1 Ubiquitylation K923 -2.496 _AASDYAGK(gl)QAHVELAER_
POLD1 Ubiquitylation K1033 0.475 -0.930 _VGGLLAFAK(gl)R_
POLD1 Ubiquitylation K1065 -0.208 _ESELYQK(gl)EVSHLNALEER_
POLE Ubiquitylation K187 -0.801 _EISPAVKK(gl)_
POLE Ubiquitylation K436 -0.163 _DSYLPVGSHNLK(gl)AAAK_
POLE Ubiquitylation K1061 -1.582 _KLEDYGEQK(gl)STSISTAK_
POLE Ubiquitylation K1081 -1.440 _LAEFLGDQMVK(gl)DAGLSCR_
POLE Ubiquitylation K1385 -1.054 -0.957 _VAK(gl)AEEGASYR_
POLE Ubiquitylation K1573 -0.910 _AETDLK(gl)TICR_
POLE Ubiquitylation K1587 -0.722 _FLLAYK(gl)EER_
POLE Ubiquitylation K2121 0.432 _YVCK(gl)VLSLDTNITNQVNK_
POLE Ubiquitylation K2135 -0.740 -1.214 _VLSLDTNITNQVNK(gl)LNR_
RFC1 Phosphorylation S156 -0.050 0.188 _NKPLS(ph)PIK_
RFC1 Phosphorylation T161 2.131 1.586 _NKPLS(ph)PIKLT(ph)PTSVLDYFGTGSVQR_
RFC1 Phosphorylation T163 1.551 _NKPLS(ph)PIKLTPT(ph)SVLDYFGTGSVQR_
RFC1 Phosphorylation S190 2.756 2.241 _ELS(ph)QNTDESGLNDEAIAK_
RFC1 Ubiquitylation K240 0.991 _TLAMLDEEPKTKK(gl)_
RFC1 Ubiquitylation K271 0.551 _VK(gl)TAQVSDERK_
RFC1 Phosphorylation S368 0.431 0.440 _KESVS(ph)PEDSEK_
RFC1 Ubiquitylation K436 -0.227 _YGGK(gl)VTGNVSK_
RFC1 Ubiquitylation K498 0.781 _SKYEIAVETEMK(gl)K_
RFC1 Ubiquitylation K499 0.781 _SKYEIAVETEMK(gl)K_
RPA1 Ubiquitylation K163 2.827 4.085 _AYGASK(gl)TFGK_
RPA1 Ubiquitylation K167 3.009 3.243 _TFGK(gl)AAGPSLSHTSGGTQSK_
RPA1 Ubiquitylation K183 0.925 _AAGPSLSHTSGGTQSK(gl)VVPIASLTPYQSK_
RPA1 Ubiquitylation K263 -1.803 _GTLK(gl)IANK_
RPA1 Ubiquitylation K267 2.751 _IANK(gl)QFTAVK_
RPA1 Ubiquitylation K331 3.112 4.066 _SYEDATK(gl)ITVR_
RPA1 Ubiquitylation K410 2.458 _SLSVLSSSTIIANPDIPEAYK(gl)LR_
RPA1 Ubiquitylation K489 0.465 2.335 _K(gl)VIDQQNGLYR_
RPA1 Ubiquitylation K588 -0.055 _IK(gl)ATVMDVKPVDYR_
RPA1 Ubiquitylation K595 1.201 _ATVMDVK(gl)PVDYR_
RPA2 Ubiquitylation K85 0.693 _HAEK(gl)APTNIVYK_
RPA2 Ubiquitylation K235 1.339 _NQLK(gl)HMSVSSIK_
RPA3 Ubiquitylation K33 0.794 _LEK(gl)IHPTGK_
RPA3 Ubiquitylation K39 1.508 1.875 _IHPTGK(gl)MFILSDGEGK_
TOP1 Phosphorylation S10 0.973 1.937 _(ac)SGDHLHNDS(ph)QIEADFR_
TOP1 Ubiquitylation K245 2.277 _FYYDGK(gl)VMK_
TOP1 Ubiquitylation K252 1.900 _LSPK(gl)AEEVATFFAK_
TOP1 Ubiquitylation K391 0.019 _DAK(gl)VPSPPPGHK_
TOP1 Ubiquitylation K545 2.178 _YYNKVPVEK(gl)R_
TOP1 Ubiquitylation K642 2.317 _TFEK(gl)SMMNLQTK_


.

© Copyright Svejstrup Laboratory 2015