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Query: GBF1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
GBF1 0 2.245 0.620 -0.640 -0.785 -0.409

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
GBF1 Ubiquitylation K212 0.865 1.415 _NYVGTNMK(gl)K_
GBF1 Ubiquitylation K715 -0.719 1.164 _LLITGTEQFNQKPK(gl)_
GBF1 Phosphorylation T1317 0.742 _GYT(ph)SDSEVYTDHGRPGK_
GBF1 Phosphorylation S1318 0.417 0.541 _GYTS(ph)DSEVYTDHGRPGK_
GBF1 Phosphorylation S1298 -0.288 -0.023 _ADAPDAGAQS(ph)DSELPSYHQNDVSLDR_
GBF1 Phosphorylation S1300 -0.275 -0.056 _ADAPDAGAQSDS(ph)ELPSYHQNDVSLDR_
GBF1 Ubiquitylation K1529 -0.652 _HLETGGQK(gl)IEADSR_
GBF1 Phosphorylation S1773 -1.189 _TPGHPPPPEIPSELGACDFEKPES(ph)PR_
GBF1 Ubiquitylation K606 0.112 _VLNSLTQQEKK(gl)_

Background Information for GBF1:


Pubmed-GBF1 »
Uniprot-GBF1 »
Biogrid-GBF1 »
ProteomicsDB-GBF1 »

Tumorportal-GBF1 »
COSMIC-GBF1 »
GenomeRNAi-GBF1 »
Genecards-GBF1


Protein-protein Interactions for GBF1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait FAM190B Cat. description Hein, Mann, Cell 2015
Category members IP bait FBXO7 Cat. description Hein, Mann, Cell 2015
Category members IP bait GBF1 Cat. description Hein, Mann, Cell 2015
Category members IP bait ZNF187 Cat. description Hein, Mann, Cell 2015
Category members IP bait C17orf60 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CHRM3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DLK2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait EPHA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GML Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LYPD3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NPY2R Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PNKD Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SPACA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM206 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in GBF1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members ARM-type_fold IPR016024 9.26
Category members Sec7_dom IPR000904 0


Protein complexes (CORUM database) featuring GBF1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring GBF1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005488 binding Database 9.32
Category members GO Category GO:0019048 modulation by virus of host morphology or physiology Database 7.81
Category members Pathway Pathway_670 PID_ARF_3PATHWAY 0 3.15
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members Pathway Pathway_474 REACTOME_MEMBRANE_TRAFFICKING 0 1.14
Category members GO Category GO:0016192 vesicle-mediated transport Database 1.1
Category members Pathway Pathway_475 REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING 0 0.98
Category members Pathway Pathway_709 BIOCARTA_ARAP_PATHWAY 0 0.76
Category members GO Category GO:0006892 post-Golgi vesicle-mediated transport Database 0.74
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0005802 trans-Golgi network Database 0.13
Category members GO Category GO:0005801 cis-Golgi network Database 0.1
Category members GO Category GO:0006890 retrograde vesicle-mediated transport, Golgi to ER Database 0.05
Category members Pathway Pathway_1272 REACTOME_COPI_MEDIATED_TRANSPORT 0 0
Category members GO Category GO:0000139 Golgi membrane Database 0
Category members GO Category GO:0005086 ARF guanyl-nucleotide exchange factor activity Database 0
Category members GO Category GO:0005777 peroxisome Database 0
Category members GO Category GO:0005788 endoplasmic reticulum lumen Database 0
Category members GO Category GO:0005795 Golgi stack Database 0
Category members GO Category GO:0032012 regulation of ARF protein signal transduction Database 0
Category members GO Category GO:0048205 COPI coating of Golgi vesicle Database 0


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