RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
GOLGA5	1	-0.670	0.800					1.692
TMED5	1	0.990	-0.670				0.765	1.532
GOLGB1	1	-1.020	1.510
GOLGB1	1	-1.020	1.510				0.400	0.360
SLC35C2	0	-1.250	2.100
SCFD1	0	-0.210	0.810	-0.210	0.253	0.724	0.114	0.376
KDELR1	0	1.060	-0.420				0.819	0.705
BET1	0	0.000	-0.090
GBF1	0	0.620	-0.640				-0.785	-0.409
GOSR1	0	0.970	-1.150				1.072
GOSR1	0	1.110	0.200				1.072
COG3	0	1.060	-1.010
KDELR2	0	0.690	-0.960				0.819	0.705
SCYL1	0	0.410	-0.530	0.944
B3GAT3	0	1.090	-0.530				1.147
TRAPPC8	0	1.820	-1.310
GOLGA2	0	1.400	-1.030	0.334			0.797	0.398
TRAPPC1	0	-0.430	1.240
TMED10	0	0.230	0.210
GOLIM4	0	1.130	-0.900				1.410	0.622
UBXN2A	0	0.000	0.120
YIPF6	0	-0.070	0.450				0.921	1.119
TRAPPC2	0	0.270	-0.500
TRAPPC2B	0

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
BET1	Ubiquitylation	K57	0.624	0.608	_SK(gl)VTAIK_
BET1	Phosphorylation	S65	0.786	0.592	_SLS(ph)IEIGHEVK_
BET1	Ubiquitylation	K77	0.171		_SLSIEIGHEVKTQNK(gl)_
COG3	Phosphorylation	S663		0.575	_LNS(ph)NNALIEFLLEGTPEIR_
GBF1	Ubiquitylation	K212	0.865	1.415	_NYVGTNMK(gl)K_
GBF1	Ubiquitylation	K606	0.112		_VLNSLTQQEKK(gl)_
GBF1	Ubiquitylation	K715	-0.719	1.164	_LLITGTEQFNQKPK(gl)_
GBF1	Phosphorylation	S1298	-0.288	-0.023	_ADAPDAGAQS(ph)DSELPSYHQNDVSLDR_
GBF1	Phosphorylation	S1300	-0.275	-0.056	_ADAPDAGAQSDS(ph)ELPSYHQNDVSLDR_
GBF1	Phosphorylation	T1317		0.742	_GYT(ph)SDSEVYTDHGRPGK_
GBF1	Phosphorylation	S1318	0.417	0.541	_GYTS(ph)DSEVYTDHGRPGK_
GBF1	Ubiquitylation	K1529		-0.652	_HLETGGQK(gl)IEADSR_
GBF1	Phosphorylation	S1773		-1.189	_TPGHPPPPEIPSELGACDFEKPES(ph)PR_
GOLGA5	Phosphorylation	S116	0.749	1.030	_KKS(ph)EPDDELLFDFLNSSQK_
GOLGA5	Ubiquitylation	K672	-0.736	-0.621	_NVPVLFNDTETNLAGMYGK(gl)VR_
GOLGB1	Phosphorylation	S6	0.891	0.541	_LS(ph)GLANVVLHELSGDDDTDQNMR_
GOLGB1	Phosphorylation	S542		2.256	_S(ph)SSAEESGQDVLENTFSQK_
GOLGB1	Ubiquitylation	K3007		0.500	_SSSSQTQPLK(gl)VQYQR_
GOSR1	Ubiquitylation	K150	-0.654	0.537	_K(gl)DIESYK(gl)SGSGVNNR_
GOSR1	Ubiquitylation	K199	-0.128	0.352	_GMLK(gl)SIHSK_
SCFD1	Ubiquitylation	K126		0.085	_SK(gl)LEDIANAALAASAVTQVAK_
SCFD1	Phosphorylation	S297		-0.347	_VNLEES(ph)SGVENSPAGARPK_
SCFD1	Phosphorylation	S303	-0.307	-0.139	_VNLEESSGVENS(ph)PAGARPK_
SCFD1	Ubiquitylation	K541	-0.462	-0.990	_NLVLK(gl)QQNLPVTR_
SCFD1	Ubiquitylation	K642	-0.394		_QLSQLGQK(gl)_
SCYL1	Phosphorylation	S754		-0.053	_PSTQPRPDS(ph)WGEDNWEGLETDSR_
SLC35C2	Phosphorylation	S364	0.599	0.693	_GLGS(ph)SPDLELLLR_
SLC35C2	Phosphorylation	S365	0.483		_GLGS(ph)SPDLELLLR_
TMED10	Ubiquitylation	K146		-0.149	_NYEEIAK(gl)VEK_
TRAPPC1	Ubiquitylation	K58	-0.375		_MSPLDMK(gl)DGFLAFQTSR_
TRAPPC2	Ubiquitylation	K142	-0.373		_KVQFLGK(gl)K_
TRAPPC2	Ubiquitylation	K143	-0.373		_KVQFLGK(gl)K_
TRAPPC2B	Ubiquitylation	K142	-0.373		_KVQFLGK(gl)K_
TRAPPC2B	Ubiquitylation	K143	-0.373		_KVQFLGK(gl)K_
TRAPPC8	Phosphorylation	S971		0.640	_RPEFFTFGGNTAVLTPLS(ph)PSASENCSAYK_
UBXN2A	Ubiquitylation	K50	-1.406	0.352	_VSSK(gl)CVSPAEQKK_
YIPF6	Phosphorylation	S7	-0.502	-0.018	_(ac)AEAEES(ph)PGDPGTASPR_
YIPF6	Ubiquitylation	K67		0.244	_DLK(gl)AVGK_