bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: GOLGB1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
GOLGB1 1 5.917 -1.020 1.510
GOLGB1 1 5.917 -1.020 1.510 0.400 0.360

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
GOLGB1 Phosphorylation S542 2.256 _S(ph)SSAEESGQDVLENTFSQK_
GOLGB1 Phosphorylation S6 0.891 0.541 _LS(ph)GLANVVLHELSGDDDTDQNMR_
GOLGB1 Ubiquitylation K3007 0.500 _SSSSQTQPLK(gl)VQYQR_

Background Information for GOLGB1:


Pubmed-GOLGB1 »
Uniprot-GOLGB1 »
Biogrid-GOLGB1 »
ProteomicsDB-GOLGB1 »

Tumorportal-GOLGB1 »
COSMIC-GOLGB1 »
GenomeRNAi-GOLGB1 »
Genecards-GOLGB1


Protein-protein Interactions for GOLGB1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CCDC93 Cat. description Hein, Mann, Cell 2015
Category members IP bait CEP135 Cat. description Hein, Mann, Cell 2015
Category members IP bait DYNLL1 Cat. description Hein, Mann, Cell 2015
Category members IP bait GAK Cat. description Hein, Mann, Cell 2015
Category members IP bait TMED2 Cat. description Hein, Mann, Cell 2015
Category members IP bait C1orf49 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IPPK Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SCGN Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMED10 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMED2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in GOLGB1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members HSP70_C IPR029048 0.66
Category members Leu_zip_homeo IPR003106 0
Category members Prefoldin IPR009053 0
Category members STAT_TF_coiled-coil IPR015988 0


Protein complexes (CORUM database) featuring GOLGB1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring GOLGB1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0005793 endoplasmic reticulum-Golgi intermediate compartment Database 0.74
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0007030 Golgi organization Database 0.13
Category members GO Category GO:0005801 cis-Golgi network Database 0.1
Category members GO Category GO:0000139 Golgi membrane Database 0
Category members GO Category GO:0004871 signal transducer activity Database 0
Category members GO Category GO:0005795 Golgi stack Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0007165 signal transduction Database 0


.

© Copyright Svejstrup Laboratory 2015