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Query: TRAPPC1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TRAPPC1 0 0.865 -0.430 1.240

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TRAPPC1 Ubiquitylation K58 -0.375 _MSPLDMK(gl)DGFLAFQTSR_

Background Information for TRAPPC1:





Protein-protein Interactions for TRAPPC1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait TRAPPC11 Cat. description Hein, Mann, Cell 2015
Category members IP bait TRAPPC8 Cat. description Hein, Mann, Cell 2015
Category members IP bait BCL2L14 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CABS1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM19A3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KANK4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STMN4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TBC1D14 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRAPPC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRAPPC2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRAPPC5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TRAPPC1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Longin-like_dom IPR011012 0.34
Category members Sybindin IPR007233 0


Protein complexes (CORUM database) featuring TRAPPC1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TRAPPC1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0005783 endoplasmic reticulum Database 0.62
Category members GO Category GO:0006888 ER to Golgi vesicle-mediated transport Database 0.28
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0005801 cis-Golgi network Database 0.1
Category members GO Category GO:0006810 transport Database 0
Category members GO Category GO:0030008 TRAPP complex Database 0


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