bioLOGIC-db

bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

Query: GOSR1

RNAi screen result	RNAPII IP (PI)	CSB IP	CSB IP (PI)	Chrom.	Chrom. (PI)	Phosphorylation	Ubiquitylation
W

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
GOSR1	0	1.480	0.970	-1.150				1.072
GOSR1	0	1.480	1.110	0.200				1.072

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
GOSR1	Ubiquitylation	K150	-0.654	0.537	_K(gl)DIESYK(gl)SGSGVNNR_
GOSR1	Ubiquitylation	K199	-0.128	0.352	_GMLK(gl)SIHSK_

Background Information for GOSR1:

Pubmed-GOSR1 »

Uniprot-GOSR1 »

Biogrid-GOSR1 »

ProteomicsDB-GOSR1 »

Tumorportal-GOSR1 »

COSMIC-GOSR1 »

GenomeRNAi-GOSR1 »

Genecards-GOSR1

Protein-protein Interactions for GOSR1

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait ATP6AP2	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait BMPR1A	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait IMMT	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MYH9	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait PTPN1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait RAB5C	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait RBM8A	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SEC24C	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TMED2	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait USO1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait VAPA	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait CLEC12A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait CSGALNACT2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait MRAP2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait SEC22B	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait SRPRB	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait STX11	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait STX12	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait STX3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait STX6	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait STX7	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TMEM150A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TMEM200A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TNFSF11	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait VAMP4	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in GOSR1

	Domain name	Domain Description	TC-NER relevance -log10(p-value)

Protein complexes (CORUM database) featuring GOSR1

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring GOSR1

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0016021	integral to membrane	Database	7.67
Category members	GO Category	GO:0015031	protein transport	Database	3.48
Category members	Pathway	Pathway_1261	KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT	0	1.52
Category members	GO Category	GO:0031201	SNARE complex	Database	0.49
Category members	GO Category	GO:0006888	ER to Golgi vesicle-mediated transport	Database	0.28
Category members	GO Category	GO:0005794	Golgi apparatus	Database	0.27
Category members	GO Category	GO:0042147	retrograde transport, endosome to Golgi	Database	0.26
Category members	GO Category	GO:0005484	SNAP receptor activity	Database	0.2
Category members	GO Category	GO:0005801	cis-Golgi network	Database	0.1
Category members	GO Category	GO:0006891	intra-Golgi vesicle-mediated transport	Database	0.1
Category members	GO Category	GO:0000139	Golgi membrane	Database	0