RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
EIF4G1	1	-1.660	2.810	0.765
EIF4G1	1	-1.660	2.810		-0.451	-0.932	-0.258	-0.331
GBA	1	-1.380	2.580	0.407			0.357	0.150
VPS35	0	-0.480	0.040
VPS35	0	-0.480	0.040	-0.214	0.370	-0.544	0.601	0.416
HTRA2	0	1.220	-0.530		0.602		-0.023	1.287
PARK7	0	-0.660	0.930
DNAJC13	0	1.510	-1.180	-0.175			0.610	0.588
UCHL1	0	-0.500	0.500				1.153	-0.238
UCHL1	0	-0.500	0.500	0.687
LRRK2	0	0.530	-0.620	-0.240
GIGYF2	0	-0.660	0.630
GIGYF2	0	-0.660	0.630	-0.833			-0.034	-0.175

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
DNAJC13	Ubiquitylation	K969	0.787		_ATVPLQSNVIEAAPDMK(gl)R_
EIF4G1	Ubiquitylation	K627	-0.658		_SDQWK(gl)PLNLEEK_
EIF4G1	Ubiquitylation	K635	-1.721	-1.834	_SDQWKPLNLEEKK(gl)_
EIF4G1	Phosphorylation	T672		-1.605	_ANKT(ph)PLRPLDPTR_
EIF4G1	Ubiquitylation	K925	0.326		_SLGNIK(gl)FIGELFK_
EIF4G1	Ubiquitylation	K975	-0.759		_DLDFEK(gl)AKPR_
EIF4G1	Phosphorylation	T1098		-0.123	_IT(ph)KPGSIDSNNQLFAPGGR_
EIF4G1	Phosphorylation	S1102	0.238	-0.562	_ITKPGS(ph)IDSNNQLFAPGGR_
EIF4G1	Phosphorylation	S1117		-0.554	_ITKPGSIDSNNQLFAPGGRLS(ph)WGK_
EIF4G1	Phosphorylation	S1210	0.417	1.061	_S(ph)FSKEVEER_
EIF4G1	Phosphorylation	S1212	1.007	0.725	_RSFS(ph)KEVEER_
EIF4G1	Phosphorylation	S1234	0.676	1.054	_AAS(ph)LTEDRDR_
EIF4G1	Phosphorylation	T1236		1.002	_KAAS(ph)LTEDRDR_
EIF4G1	Phosphorylation	S1256	-1.072	-0.563	_REAALPPVS(ph)PLK_
EIF4G1	Phosphorylation	S1263	0.713	0.836	_AALS(ph)EEELEKK_
GIGYF2	Phosphorylation	S20	1.394	0.572	_ALSS(ph)GGSITS(ph)PPLSPALPK_
GIGYF2	Phosphorylation	T25	-1.198	-0.724	_ALSSGGSIT(ph)SPPLSPALPK_
GIGYF2	Phosphorylation	S26	-1.157	-0.630	_ALSSGGSITS(ph)PPLSPALPK_
GIGYF2	Phosphorylation	S30	-1.557	-1.373	_ALSSGGSITS(ph)PPLS(ph)PALPK_
GIGYF2	Phosphorylation	T404	-0.311	-0.134	_PGT(ph)PSDHQSQEASQFER_
GIGYF2	Ubiquitylation	K1007	0.724	-1.404	_ALQQQQQQQQQK(gl)LSGWGNVSKPSGTTK_
GIGYF2	Ubiquitylation	K1016		-0.562	_LSGWGNVSK(gl)PSGTTK_
GIGYF2	Ubiquitylation	K1106	0.994		_NSNMGFWDDAVK(gl)EVGPR_
GIGYF2	Ubiquitylation	K1125	0.915	-0.414	_NNASLSK(gl)SVGVSNR_
HTRA2	Ubiquitylation	K237	-1.868	-0.270	_IQTK(gl)EPLPTLPLGR_
PARK7	Ubiquitylation	K41	0.222	0.590	_VTVAGLAGK(gl)DPVQCSR_
PARK7	Ubiquitylation	K93	-0.291		_EILK(gl)EQENR_
PARK7	Ubiquitylation	K132	0.639		_VTTHPLAKDK(gl)_
UCHL1	Ubiquitylation	K4	-0.164	-0.657	_MQLK(gl)PMEINPEMLNK_
UCHL1	Ubiquitylation	K65	-0.004	-0.789	_K(gl)QIEELKGQEVSPK_
UCHL1	Ubiquitylation	K71	-0.121	-0.325	_QIEELK(gl)GQEVSPK_
UCHL1	Ubiquitylation	K78	-0.595		_QIEELKGQEVSPK(gl)VYFMK_
UCHL1	Ubiquitylation	K123	-0.013	-0.297	_QFLSETEK(gl)M(ox)SPEDR_
UCHL1	Ubiquitylation	K135	-0.048		_CFEK(gl)NEAIQAAHDAVAQEGQCR_
UCHL1	Ubiquitylation	K195	-0.285	-0.704	_MPFPVNHGASSEDTLLK(gl)DAAK_
UCHL1	Ubiquitylation	K221	-0.155	-0.216	_FSAVALCK(gl)AA_
VPS35	Phosphorylation	T4	-0.120		_PTT(ph)QQSPQDEQEKLLDEAIQAVK_
VPS35	Phosphorylation	S7		0.322	_PTTQQS(ph)PQDEQEKLLDEAIQAVK_
VPS35	Ubiquitylation	K659		-0.478	_TQCALAASK(gl)LLK_